RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 CTR9Q6PD62 1173 aa22.28■■□□□ 1.16
HOXC6-202ENST00000394331 KCNH5Q8NCM2 988 aa22.28■■□□□ 1.16
HOXC6-202ENST00000394331 H2AFXP16104 143 aaPredicted RBP22.28■■□□□ 1.16
HOXC6-202ENST00000394331 LRMPQ12912 555 aa22.28■■□□□ 1.16
HOXC6-202ENST00000394331 SSH3Q8TE77 659 aa22.28■■□□□ 1.16
HOXC6-202ENST00000394331 ZNF75DP51815 510 aa22.27■■□□□ 1.16
HOXC6-202ENST00000394331 ANKLE2Q86XL3 938 aa22.27■■□□□ 1.16
HOXC6-202ENST00000394331 PALD1Q9ULE6 856 aa22.27■■□□□ 1.16
HOXC6-202ENST00000394331 RAB11FIP3O75154 756 aa22.27■■□□□ 1.16
HOXC6-202ENST00000394331 ZNF446Q9NWS9 450 aa22.27■■□□□ 1.16
HOXC6-202ENST00000394331 STX6O43752 255 aa22.27■■□□□ 1.15
HOXC6-202ENST00000394331 FOXD4L6Q3SYB3 417 aaPredicted RBP22.27■■□□□ 1.15
HOXC6-202ENST00000394331 FOXD4L3Q6VB84 417 aaPredicted RBP22.27■■□□□ 1.15
HOXC6-202ENST00000394331 TXLNBQ8N3L3 684 aa22.27■■□□□ 1.15
HOXC6-202ENST00000394331 KIF2AO00139 706 aaPredicted RBP22.26■■□□□ 1.15
HOXC6-202ENST00000394331 ERBB3P21860 1342 aa22.26■■□□□ 1.15
HOXC6-202ENST00000394331 CHMLP26374 656 aa22.26■■□□□ 1.15
HOXC6-202ENST00000394331 TSHZ3Q63HK5 1081 aa22.26■■□□□ 1.15
HOXC6-202ENST00000394331 MRVI1Q9Y6F6 885 aa22.26■■□□□ 1.15
HOXC6-202ENST00000394331 SLU7O95391 586 aaKnown RBP22.25■■□□□ 1.15
HOXC6-202ENST00000394331 EIF4A1P60842 406 aaKnown RBP22.25■■□□□ 1.15
HOXC6-202ENST00000394331 PSME1Q06323 249 aa22.25■■□□□ 1.15
HOXC6-202ENST00000394331 NBPF6Q5VWK0 638 aa22.25■■□□□ 1.15
HOXC6-202ENST00000394331 TDRD7Q8NHU6 1098 aaKnown RBP22.25■■□□□ 1.15
HOXC6-202ENST00000394331 NBPF4Q96M43 638 aa22.25■■□□□ 1.15
HOXC6-202ENST00000394331 PHAXQ9H814 394 aaKnown RBP22.25■■□□□ 1.15
HOXC6-202ENST00000394331 RILPL2Q969X0 211 aa22.25■■□□□ 1.15
HOXC6-202ENST00000394331 RAD50Q92878 1312 aa22.24■■□□□ 1.15
HOXC6-202ENST00000394331 N4BP2Q86UW6 1770 aaPredicted RBP22.24■■□□□ 1.15
HOXC6-202ENST00000394331 MAP3K11Q16584 847 aa22.24■■□□□ 1.15
HOXC6-202ENST00000394331 ZFP91Q96JP5 570 aaPredicted RBP22.24■■□□□ 1.15
HOXC6-202ENST00000394331 RASSF4Q9H2L5 321 aa22.24■■□□□ 1.15
HOXC6-202ENST00000394331 ELF2Q15723 593 aa22.24■■□□□ 1.15
HOXC6-202ENST00000394331 TEX35Q5T0J7 233 aa22.24■■□□□ 1.15
HOXC6-202ENST00000394331 TYRO3Q06418 890 aa22.23■■□□□ 1.15
HOXC6-202ENST00000394331 FHOD1Q9Y613 1164 aa22.23■■□□□ 1.15
HOXC6-202ENST00000394331 NFAT5O94916 1531 aa22.23■■□□□ 1.15
HOXC6-202ENST00000394331 EIF2S2P20042 333 aaKnown RBP22.23■■□□□ 1.15
HOXC6-202ENST00000394331 PTPN14Q15678 1187 aa22.23■■□□□ 1.15
HOXC6-202ENST00000394331 FIBPO43427 364 aa22.22■■□□□ 1.15
HOXC6-202ENST00000394331 SYT1P21579 422 aa22.22■■□□□ 1.15
HOXC6-202ENST00000394331 POLA2Q14181 598 aa22.22■■□□□ 1.15
HOXC6-202ENST00000394331 CACTINQ8WUQ7 758 aaKnown RBP22.22■■□□□ 1.15
HOXC6-202ENST00000394331 ST7Q9NRC1 585 aa22.22■■□□□ 1.15
HOXC6-202ENST00000394331 MMP14P50281 582 aa22.22■■□□□ 1.15
HOXC6-202ENST00000394331 PLEKHO1Q53GL0 409 aaPredicted RBP22.22■■□□□ 1.15
HOXC6-202ENST00000394331 AKAP4Q5JQC9 854 aa22.22■■□□□ 1.15
HOXC6-202ENST00000394331 PPP1R42Q7Z4L9 355 aa22.22■■□□□ 1.15
HOXC6-202ENST00000394331 DRC7Q8IY82 874 aa22.22■■□□□ 1.15
HOXC6-202ENST00000394331 LGR6Q9HBX8 967 aa22.22■■□□□ 1.15
HOXC6-202ENST00000394331 ADGRL3Q9HAR2 1447 aa22.22■■□□□ 1.15
HOXC6-202ENST00000394331 ELP1O95163 1332 aa22.21■■□□□ 1.15
HOXC6-202ENST00000394331 CAVIN2O95810 425 aa22.21■■□□□ 1.15
HOXC6-202ENST00000394331 TEFQ10587 303 aa22.21■■□□□ 1.15
HOXC6-202ENST00000394331 ESCO1Q5FWF5 840 aa22.21■■□□□ 1.15
HOXC6-202ENST00000394331 ANO2Q9NQ90 1003 aa22.21■■□□□ 1.15
HOXC6-202ENST00000394331 MED1Q15648 1581 aaPredicted RBP22.21■■□□□ 1.15
HOXC6-202ENST00000394331 SURF6O75683 361 aaKnown RBP22.21■■□□□ 1.15
HOXC6-202ENST00000394331 NOP2P46087 812 aaKnown RBP22.21■■□□□ 1.15
HOXC6-202ENST00000394331 MAPK8IP2Q13387 824 aaPredicted RBP22.21■■□□□ 1.15
HOXC6-202ENST00000394331 RBM43Q6ZSC3 357 aaKnown RBP22.21■■□□□ 1.15
HOXC6-202ENST00000394331 DNAAF4Q8WXU2 420 aa22.2■■□□□ 1.15
HOXC6-202ENST00000394331 NRBP1Q9UHY1 535 aa22.2■■□□□ 1.15
HOXC6-202ENST00000394331 TPM4P67936 248 aa22.2■■□□□ 1.14
HOXC6-202ENST00000394331 AMOTQ4VCS5 1084 aa22.2■■□□□ 1.14
HOXC6-202ENST00000394331 L2HGDHQ9H9P8 463 aa22.2■■□□□ 1.14
HOXC6-202ENST00000394331 CBX8Q9HC52 389 aa22.2■■□□□ 1.14
HOXC6-202ENST00000394331 LTN1O94822 1766 aa22.2■■□□□ 1.14
HOXC6-202ENST00000394331 NUP62CLQ9H1M0 184 aa22.2■■□□□ 1.14
HOXC6-202ENST00000394331 ZNF530Q6P9A1 599 aaPredicted RBP22.19■■□□□ 1.14
HOXC6-202ENST00000394331 LUZP1Q86V48 1076 aa22.19■■□□□ 1.14
HOXC6-202ENST00000394331 TRIM5Q9C035 493 aa22.19■■□□□ 1.14
HOXC6-202ENST00000394331 CHPF2Q9P2E5 772 aa22.19■■□□□ 1.14
HOXC6-202ENST00000394331 HSPA4P34932 840 aa22.19■■□□□ 1.14
HOXC6-202ENST00000394331 TNNT3P45378 269 aaPredicted RBP22.19■■□□□ 1.14
HOXC6-202ENST00000394331 HSP90AB4PQ58FF6 505 aa22.19■■□□□ 1.14
HOXC6-202ENST00000394331 LRRC8AQ8IWT6 810 aa22.19■■□□□ 1.14
HOXC6-202ENST00000394331 IL1RAPL2Q9NP60 686 aa22.19■■□□□ 1.14
HOXC6-202ENST00000394331 CHD2O14647 1828 aaKnown RBP22.19■■□□□ 1.14
HOXC6-202ENST00000394331 BTBD11A6QL63 1104 aa22.18■■□□□ 1.14
HOXC6-202ENST00000394331 ATP8B1O43520 1251 aa22.18■■□□□ 1.14
HOXC6-202ENST00000394331 BEND3Q5T5X7 828 aa22.18■■□□□ 1.14
HOXC6-202ENST00000394331 SARM1Q6SZW1 724 aa22.18■■□□□ 1.14
HOXC6-202ENST00000394331 NOL8Q76FK4 1167 aaKnown RBP22.18■■□□□ 1.14
HOXC6-202ENST00000394331 RHPN1Q8TCX5 695 aa22.18■■□□□ 1.14
HOXC6-202ENST00000394331 CLIP2Q9UDT6 1046 aa22.18■■□□□ 1.14
HOXC6-202ENST00000394331 SRGAP3O43295 1099 aa22.18■■□□□ 1.14
HOXC6-202ENST00000394331 ZNF592Q92610 1267 aa22.17■■□□□ 1.14
HOXC6-202ENST00000394331 PI4KAP2A4QPH2 592 aa22.17■■□□□ 1.14
HOXC6-202ENST00000394331 PNMA6AP0CW24 399 aaPredicted RBP22.17■■□□□ 1.14
HOXC6-202ENST00000394331 PI4KAP1Q8N8J0 262 aa22.17■■□□□ 1.14
HOXC6-202ENST00000394331 RSPH14Q9UHP6 348 aa22.17■■□□□ 1.14
HOXC6-202ENST00000394331 TTC14Q96N46 770 aa22.17■■□□□ 1.14
HOXC6-202ENST00000394331 TUBB4AP04350 444 aa22.16■■□□□ 1.14
HOXC6-202ENST00000394331 PLA2G4AP47712 749 aa22.16■■□□□ 1.14
HOXC6-202ENST00000394331 UNC5CLQ8IV45 518 aa22.16■■□□□ 1.14
HOXC6-202ENST00000394331 UPF3BQ9BZI7 483 aaKnown RBP22.16■■□□□ 1.14
HOXC6-202ENST00000394331 UBXN6Q9BZV1 441 aa22.16■■□□□ 1.14
HOXC6-202ENST00000394331 V9GYY5 206 aaPredicted RBP22.16■■□□□ 1.14
HOXC6-202ENST00000394331 ZRANB2O95218 330 aaKnown RBP eCLIP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms