RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 PALLDQ8WX93 1383 aa23.4■■□□□ 1.34
CLDND1-203ENST00000394181 GPTP24298 496 aa23.39■■□□□ 1.33
CLDND1-203ENST00000394181 RBM25P49756 843 aaKnown RBP23.39■■□□□ 1.33
CLDND1-203ENST00000394181 KCNQ4P56696 695 aa23.39■■□□□ 1.33
CLDND1-203ENST00000394181 SYNE4Q8N205 404 aa23.39■■□□□ 1.33
CLDND1-203ENST00000394181 CLASRPQ8N2M8 674 aaKnown RBP23.39■■□□□ 1.33
CLDND1-203ENST00000394181 GIGYF2Q6Y7W6 1299 aaKnown RBP23.38■■□□□ 1.33
CLDND1-203ENST00000394181 ERC1Q8IUD2 1116 aa23.38■■□□□ 1.33
CLDND1-203ENST00000394181 EAF2Q96CJ1 260 aaPredicted RBP23.38■■□□□ 1.33
CLDND1-203ENST00000394181 COPRSQ9NQ92 184 aa23.38■■□□□ 1.33
CLDND1-203ENST00000394181 CHMP3Q9Y3E7 222 aa23.38■■□□□ 1.33
CLDND1-203ENST00000394181 CRKLP46109 303 aaKnown RBP23.38■■□□□ 1.33
CLDND1-203ENST00000394181 AACSQ86V21 672 aa23.38■■□□□ 1.33
CLDND1-203ENST00000394181 FAM89AQ96GI7 184 aa23.38■■□□□ 1.33
CLDND1-203ENST00000394181 AFF2P51816 1311 aa23.38■■□□□ 1.33
CLDND1-203ENST00000394181 IL6STP40189 918 aaPredicted RBP23.37■■□□□ 1.33
CLDND1-203ENST00000394181 TRIM28Q13263 835 aaKnown RBP23.37■■□□□ 1.33
CLDND1-203ENST00000394181 CCDC8Q9H0W5 538 aaPredicted RBP23.37■■□□□ 1.33
CLDND1-203ENST00000394181 TLR7Q9NYK1 1049 aaKnown RBP23.37■■□□□ 1.33
CLDND1-203ENST00000394181 AOX1Q06278 1338 aa23.36■■□□□ 1.33
CLDND1-203ENST00000394181 DZIP3Q86Y13 1208 aaKnown RBP23.36■■□□□ 1.33
CLDND1-203ENST00000394181 GJD4Q96KN9 370 aaPredicted RBP23.36■■□□□ 1.33
CLDND1-203ENST00000394181 KIF2CQ99661 725 aa23.36■■□□□ 1.33
CLDND1-203ENST00000394181 CCDC87Q9NVE4 849 aa23.36■■□□□ 1.33
CLDND1-203ENST00000394181 DAXXQ9UER7 740 aaPredicted RBP23.36■■□□□ 1.33
CLDND1-203ENST00000394181 TUBGCP6Q96RT7 1819 aa23.35■■□□□ 1.33
CLDND1-203ENST00000394181 IFIT2P09913 472 aaKnown RBP23.35■■□□□ 1.33
CLDND1-203ENST00000394181 EIF5P55010 431 aaKnown RBP23.35■■□□□ 1.33
CLDND1-203ENST00000394181 NLRP10Q86W26 655 aa23.34■■□□□ 1.33
CLDND1-203ENST00000394181 USP42Q9H9J4 1324 aaKnown RBP23.34■■□□□ 1.33
CLDND1-203ENST00000394181 TBC1D2Q9BYX2 928 aa23.34■■□□□ 1.33
CLDND1-203ENST00000394181 CHMLP26374 656 aa23.33■■□□□ 1.33
CLDND1-203ENST00000394181 TFCP2Q12800 502 aa23.33■■□□□ 1.33
CLDND1-203ENST00000394181 CASC1Q6TDU7 716 aa23.33■■□□□ 1.33
CLDND1-203ENST00000394181 ZNF594Q96JF6 807 aaPredicted RBP23.33■■□□□ 1.33
CLDND1-203ENST00000394181 USP26Q9BXU7 913 aa23.33■■□□□ 1.33
CLDND1-203ENST00000394181 CCDC85AQ96PX6 553 aaPredicted RBP23.33■■□□□ 1.32
CLDND1-203ENST00000394181 SMARCC1Q92922 1105 aaPredicted RBP23.32■■□□□ 1.32
CLDND1-203ENST00000394181 PCCAP05165 728 aaPredicted RBP23.31■■□□□ 1.32
CLDND1-203ENST00000394181 ZBTB38Q8NAP3 1195 aaPredicted RBP23.31■■□□□ 1.32
CLDND1-203ENST00000394181 ECHDC1Q9NTX5 307 aa23.31■■□□□ 1.32
CLDND1-203ENST00000394181 TTC41PQ6P2S7 1318 aa23.31■■□□□ 1.32
CLDND1-203ENST00000394181 LINC00116Q8NCU8 138 aa23.3■■□□□ 1.32
CLDND1-203ENST00000394181 ANP32EQ9BTT0 268 aa23.3■■□□□ 1.32
CLDND1-203ENST00000394181 IL25Q9H293 177 aa23.3■■□□□ 1.32
CLDND1-203ENST00000394181 THSD7AQ9UPZ6 1657 aa23.3■■□□□ 1.32
CLDND1-203ENST00000394181 UBN2Q6ZU65 1347 aa23.3■■□□□ 1.32
CLDND1-203ENST00000394181 ERVV-1B6SEH8 477 aa23.3■■□□□ 1.32
CLDND1-203ENST00000394181 ERC2O15083 957 aa23.3■■□□□ 1.32
CLDND1-203ENST00000394181 ATG9AQ7Z3C6 839 aa23.3■■□□□ 1.32
CLDND1-203ENST00000394181 SMIM5Q71RC9 77 aa23.29■■□□□ 1.32
CLDND1-203ENST00000394181 ESYT1Q9BSJ8 1104 aa23.29■■□□□ 1.32
CLDND1-203ENST00000394181 MYH14Q7Z406 1995 aaKnown RBP23.29■■□□□ 1.32
CLDND1-203ENST00000394181 EP400Q96L91 3159 aa23.29■■□□□ 1.32
CLDND1-203ENST00000394181 GLRX3O76003 335 aaKnown RBP23.28■■□□□ 1.32
CLDND1-203ENST00000394181 BECN1Q14457 450 aa23.28■■□□□ 1.32
CLDND1-203ENST00000394181 LRRC24Q50LG9 513 aa23.28■■□□□ 1.32
CLDND1-203ENST00000394181 HSP90AB3PQ58FF7 597 aa23.28■■□□□ 1.32
CLDND1-203ENST00000394181 ZNF34Q8IZ26 560 aa23.27■■□□□ 1.32
CLDND1-203ENST00000394181 PUS3Q9BZE2 481 aaKnown RBP23.27■■□□□ 1.32
CLDND1-203ENST00000394181 TNNI3KQ59H18 835 aa23.27■■□□□ 1.32
CLDND1-203ENST00000394181 TRMT112Q9UI30 125 aaKnown RBP23.27■■□□□ 1.32
CLDND1-203ENST00000394181 FPGT-TNNI3KV9GXZ4 949 aa23.27■■□□□ 1.32
CLDND1-203ENST00000394181 CAMTA2O94983 1202 aa23.26■■□□□ 1.31
CLDND1-203ENST00000394181 SEPT12Q8IYM1 358 aa23.26■■□□□ 1.31
CLDND1-203ENST00000394181 DBNLQ9UJU6 430 aaKnown RBP23.26■■□□□ 1.31
CLDND1-203ENST00000394181 ATRNO75882 1429 aa23.26■■□□□ 1.31
CLDND1-203ENST00000394181 ONECUT3O60422 494 aaPredicted RBP23.25■■□□□ 1.31
CLDND1-203ENST00000394181 GPATCH3Q96I76 525 aa23.25■■□□□ 1.31
CLDND1-203ENST00000394181 PLA2G12BQ9BX93 195 aa23.25■■□□□ 1.31
CLDND1-203ENST00000394181 QTRT2Q9H974 415 aaKnown RBP23.25■■□□□ 1.31
CLDND1-203ENST00000394181 TRPC5Q9UL62 973 aaPredicted RBP23.25■■□□□ 1.31
CLDND1-203ENST00000394181 NUP98P52948 1817 aa23.25■■□□□ 1.31
CLDND1-203ENST00000394181 FAM177BA6PVY3 158 aa23.24■■□□□ 1.31
CLDND1-203ENST00000394181 REC8O95072 547 aa23.24■■□□□ 1.31
CLDND1-203ENST00000394181 CSF1RP07333 972 aa23.24■■□□□ 1.31
CLDND1-203ENST00000394181 CNTROBQ8N137 903 aa23.24■■□□□ 1.31
CLDND1-203ENST00000394181 CD2BP2O95400 341 aaKnown RBP23.24■■□□□ 1.31
CLDND1-203ENST00000394181 SPRYD3Q8NCJ5 442 aa23.24■■□□□ 1.31
CLDND1-203ENST00000394181 BOLA2Q9H3K6 86 aa23.24■■□□□ 1.31
CLDND1-203ENST00000394181 IRS4O14654 1257 aaPredicted RBP23.23■■□□□ 1.31
CLDND1-203ENST00000394181 SUSD4Q5VX71 490 aa23.23■■□□□ 1.31
CLDND1-203ENST00000394181 DBNDD2Q9BQY9 259 aa23.23■■□□□ 1.31
CLDND1-203ENST00000394181 EYA2O00167 538 aa23.23■■□□□ 1.31
CLDND1-203ENST00000394181 CCDC57Q2TAC2 916 aa23.23■■□□□ 1.31
CLDND1-203ENST00000394181 CDHR2Q9BYE9 1310 aa23.22■■□□□ 1.31
CLDND1-203ENST00000394181 RREB1Q92766 1687 aa23.22■■□□□ 1.31
CLDND1-203ENST00000394181 TTLL11Q8NHH1 800 aa23.22■■□□□ 1.31
CLDND1-203ENST00000394181 TIMM10P62072 90 aa23.21■■□□□ 1.31
CLDND1-203ENST00000394181 GREM2Q9H772 168 aa23.21■■□□□ 1.31
CLDND1-203ENST00000394181 NDUFB9Q9Y6M9 179 aa23.21■■□□□ 1.31
CLDND1-203ENST00000394181 IL15P40933 162 aaPredicted RBP23.2■■□□□ 1.3
CLDND1-203ENST00000394181 EDC3Q96F86 508 aaKnown RBP23.2■■□□□ 1.3
CLDND1-203ENST00000394181 ANO2Q9NQ90 1003 aa23.2■■□□□ 1.3
CLDND1-203ENST00000394181 ANKRD36CQ5JPF3 1778 aa23.2■■□□□ 1.3
CLDND1-203ENST00000394181 CICQ96RK0 1608 aaPredicted RBP23.2■■□□□ 1.3
CLDND1-203ENST00000394181 EIF5BO60841 1220 aaKnown RBP23.2■■□□□ 1.3
CLDND1-203ENST00000394181 CTSWP56202 376 aa23.2■■□□□ 1.3
CLDND1-203ENST00000394181 CWC27Q6UX04 472 aaKnown RBP23.2■■□□□ 1.3
CLDND1-203ENST00000394181 SLKQ9H2G2 1235 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms