RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 LMBR1LQ6UX01 489 aa13.39□□□□□ -0.27
CASP3-202ENST00000393585 CNTROBQ8N137 903 aa13.39□□□□□ -0.27
CASP3-202ENST00000393585 CHMP3Q9Y3E7 222 aa13.39□□□□□ -0.27
CASP3-202ENST00000393585 WNK3Q9BYP7 1800 aa13.39□□□□□ -0.27
CASP3-202ENST00000393585 TOM1O60784 492 aa13.39□□□□□ -0.27
CASP3-202ENST00000393585 VSIG10Q8N0Z9 540 aa13.39□□□□□ -0.27
CASP3-202ENST00000393585 CCDC9Q9Y3X0 531 aaKnown RBP13.39□□□□□ -0.27
CASP3-202ENST00000393585 H7C1W4 665 aa13.38□□□□□ -0.27
CASP3-202ENST00000393585 COPRSQ9NQ92 184 aa13.38□□□□□ -0.27
CASP3-202ENST00000393585 NRAPQ86VF7 1730 aa13.38□□□□□ -0.27
CASP3-202ENST00000393585 TJP1Q07157 1748 aa13.38□□□□□ -0.27
CASP3-202ENST00000393585 DDB1Q16531 1140 aa13.38□□□□□ -0.27
CASP3-202ENST00000393585 STARD3NLO95772 234 aa13.37□□□□□ -0.27
CASP3-202ENST00000393585 HSP90AA1P07900 732 aaKnown RBP13.37□□□□□ -0.27
CASP3-202ENST00000393585 FOXO4P98177 505 aa13.37□□□□□ -0.27
CASP3-202ENST00000393585 GPATCH3Q96I76 525 aa13.37□□□□□ -0.27
CASP3-202ENST00000393585 TEX13AQ9BXU3 409 aaPredicted RBP13.37□□□□□ -0.27
CASP3-202ENST00000393585 PALD1Q9ULE6 856 aa13.37□□□□□ -0.27
CASP3-202ENST00000393585 COL15A1P39059 1388 aa13.37□□□□□ -0.27
CASP3-202ENST00000393585 CCDC191Q8NCU4 936 aa13.37□□□□□ -0.27
CASP3-202ENST00000393585 ACSBG1Q96GR2 724 aa13.37□□□□□ -0.27
CASP3-202ENST00000393585 CHMP5Q9NZZ3 219 aa13.37□□□□□ -0.27
CASP3-202ENST00000393585 DOT1LQ8TEK3 1739 aa13.37□□□□□ -0.27
CASP3-202ENST00000393585 TAOK2Q9UL54 1235 aa13.36□□□□□ -0.27
CASP3-202ENST00000393585 LRP6O75581 1613 aa13.36□□□□□ -0.27
CASP3-202ENST00000393585 DEKP35659 375 aaKnown RBP13.36□□□□□ -0.27
CASP3-202ENST00000393585 TFCP2Q12800 502 aa13.36□□□□□ -0.27
CASP3-202ENST00000393585 CWC27Q6UX04 472 aaKnown RBP13.36□□□□□ -0.27
CASP3-202ENST00000393585 ZBTB1Q9Y2K1 713 aa13.36□□□□□ -0.27
CASP3-202ENST00000393585 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.36□□□□□ -0.27
CASP3-202ENST00000393585 UBAP1LF5GYI3 381 aa13.35□□□□□ -0.27
CASP3-202ENST00000393585 TCIRG1Q13488 830 aa13.35□□□□□ -0.27
CASP3-202ENST00000393585 KIF6Q6ZMV9 814 aa13.35□□□□□ -0.27
CASP3-202ENST00000393585 SGSM2O43147 1006 aa13.35□□□□□ -0.27
CASP3-202ENST00000393585 CYP19A1P11511 503 aaPredicted RBP13.35□□□□□ -0.27
CASP3-202ENST00000393585 ISCA1Q9BUE6 129 aa13.35□□□□□ -0.27
CASP3-202ENST00000393585 BOLA2Q9H3K6 86 aa13.35□□□□□ -0.27
CASP3-202ENST00000393585 THRAP3Q9Y2W1 955 aaKnown RBP13.35□□□□□ -0.27
CASP3-202ENST00000393585 SPATA31A5Q5VU36 1347 aa13.34□□□□□ -0.27
CASP3-202ENST00000393585 SPATA31A7Q8IWB4 1347 aa13.34□□□□□ -0.27
CASP3-202ENST00000393585 DDIT3P35638 169 aa13.34□□□□□ -0.27
CASP3-202ENST00000393585 MARCH10Q8NA82 808 aaPredicted RBP13.34□□□□□ -0.27
CASP3-202ENST00000393585 MCCP23508 829 aa13.34□□□□□ -0.27
CASP3-202ENST00000393585 HLFQ16534 295 aa13.34□□□□□ -0.27
CASP3-202ENST00000393585 TNNI3KQ59H18 835 aa13.34□□□□□ -0.27
CASP3-202ENST00000393585 CDCA7Q9BWT1 371 aaPredicted RBP13.34□□□□□ -0.27
CASP3-202ENST00000393585 DIAPH3Q9NSV4 1193 aa13.34□□□□□ -0.27
CASP3-202ENST00000393585 FPGT-TNNI3KV9GXZ4 949 aa13.34□□□□□ -0.27
CASP3-202ENST00000393585 ST18O60284 1047 aa13.33□□□□□ -0.28
CASP3-202ENST00000393585 ZNF594Q96JF6 807 aaPredicted RBP13.33□□□□□ -0.28
CASP3-202ENST00000393585 DBNLQ9UJU6 430 aaKnown RBP13.33□□□□□ -0.28
CASP3-202ENST00000393585 GPTP24298 496 aa13.33□□□□□ -0.28
CASP3-202ENST00000393585 NEK4P51957 841 aa13.33□□□□□ -0.28
CASP3-202ENST00000393585 FAM89AQ96GI7 184 aa13.33□□□□□ -0.28
CASP3-202ENST00000393585 CCDC85AQ96PX6 553 aaPredicted RBP13.33□□□□□ -0.28
CASP3-202ENST00000393585 SLIT2O94813 1529 aa13.33□□□□□ -0.28
CASP3-202ENST00000393585 MAP3K15Q6ZN16 1313 aa13.33□□□□□ -0.28
CASP3-202ENST00000393585 EVI5LQ96CN4 794 aa13.32□□□□□ -0.28
CASP3-202ENST00000393585 GIGYF2Q6Y7W6 1299 aaKnown RBP13.32□□□□□ -0.28
CASP3-202ENST00000393585 SYNE4Q8N205 404 aa13.32□□□□□ -0.28
CASP3-202ENST00000393585 EDC3Q96F86 508 aaKnown RBP13.32□□□□□ -0.28
CASP3-202ENST00000393585 C8orf37Q96NL8 207 aa13.32□□□□□ -0.28
CASP3-202ENST00000393585 NDUFB9Q9Y6M9 179 aa13.32□□□□□ -0.28
CASP3-202ENST00000393585 LRRC24Q50LG9 513 aa13.31□□□□□ -0.28
CASP3-202ENST00000393585 DBNDD2Q9BQY9 259 aa13.31□□□□□ -0.28
CASP3-202ENST00000393585 LSG1Q9H089 658 aaKnown RBP13.31□□□□□ -0.28
CASP3-202ENST00000393585 TBC1D2BQ9UPU7 963 aa13.31□□□□□ -0.28
CASP3-202ENST00000393585 RAD50Q92878 1312 aa13.31□□□□□ -0.28
CASP3-202ENST00000393585 ATG9AQ7Z3C6 839 aa13.31□□□□□ -0.28
CASP3-202ENST00000393585 UPF3BQ9BZI7 483 aaKnown RBP13.31□□□□□ -0.28
CASP3-202ENST00000393585 HSPA4P34932 840 aa13.3□□□□□ -0.28
CASP3-202ENST00000393585 FAM98CQ17RN3 349 aaKnown RBP13.3□□□□□ -0.28
CASP3-202ENST00000393585 FAM227BQ96M60 508 aa13.3□□□□□ -0.28
CASP3-202ENST00000393585 NWD2Q9ULI1 1742 aa13.3□□□□□ -0.28
CASP3-202ENST00000393585 ANAPC15P60006 121 aa13.3□□□□□ -0.28
CASP3-202ENST00000393585 TRIM28Q13263 835 aaKnown RBP13.3□□□□□ -0.28
CASP3-202ENST00000393585 NOL8Q76FK4 1167 aaKnown RBP13.3□□□□□ -0.28
CASP3-202ENST00000393585 FSD1Q9BTV5 496 aa13.3□□□□□ -0.28
CASP3-202ENST00000393585 PUS3Q9BZE2 481 aaKnown RBP13.3□□□□□ -0.28
CASP3-202ENST00000393585 KIAA1211Q6ZU35 1233 aa13.29□□□□□ -0.28
CASP3-202ENST00000393585 NGLY1Q96IV0 654 aa13.29□□□□□ -0.28
CASP3-202ENST00000393585 KCNQ2O43526 872 aa13.29□□□□□ -0.28
CASP3-202ENST00000393585 PCCAP05165 728 aaPredicted RBP13.29□□□□□ -0.28
CASP3-202ENST00000393585 ATP6V1AP38606 617 aa13.29□□□□□ -0.28
CASP3-202ENST00000393585 PTH1RQ03431 593 aa13.29□□□□□ -0.28
CASP3-202ENST00000393585 BARGINQ6ZT62 677 aa13.29□□□□□ -0.28
CASP3-202ENST00000393585 DZIP3Q86Y13 1208 aaKnown RBP13.29□□□□□ -0.28
CASP3-202ENST00000393585 RUFY2Q8WXA3 655 aa13.29□□□□□ -0.28
CASP3-202ENST00000393585 NEUROD6Q96NK8 337 aa13.29□□□□□ -0.28
CASP3-202ENST00000393585 NMIQ13287 307 aaPredicted RBP13.28□□□□□ -0.28
CASP3-202ENST00000393585 NLRP10Q86W26 655 aa13.28□□□□□ -0.28
CASP3-202ENST00000393585 ZBTB38Q8NAP3 1195 aaPredicted RBP13.28□□□□□ -0.28
CASP3-202ENST00000393585 DNAJC2Q99543 621 aaKnown RBP13.28□□□□□ -0.28
CASP3-202ENST00000393585 CIZ1Q9ULV3 898 aaPredicted RBP13.28□□□□□ -0.28
CASP3-202ENST00000393585 EYA2O00167 538 aa13.28□□□□□ -0.28
CASP3-202ENST00000393585 ATP5JP18859 108 aa13.28□□□□□ -0.28
CASP3-202ENST00000393585 MCM4P33991 863 aa13.28□□□□□ -0.28
CASP3-202ENST00000393585 TIMM10P62072 90 aa13.28□□□□□ -0.28
CASP3-202ENST00000393585 CCDC57Q2TAC2 916 aa13.28□□□□□ -0.28
CASP3-202ENST00000393585 RASEFQ8IZ41 740 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms