RNA–Protein interactions for RNA: ENST00000393540.7

CCDC110-202, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC110, Length 2,722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-202ENST00000393540 SASH1O94885 1247 aa4.67□□□□□ -1.66
CCDC110-202ENST00000393540 DDIT3P35638 169 aa4.67□□□□□ -1.66
CCDC110-202ENST00000393540 ANKRD13DQ6ZTN6 518 aa4.67□□□□□ -1.66
CCDC110-202ENST00000393540 TTC5Q8N0Z6 440 aa4.67□□□□□ -1.66
CCDC110-202ENST00000393540 RBM42Q9BTD8 480 aaKnown RBP4.67□□□□□ -1.66
CCDC110-202ENST00000393540 CHMP4AQ9BY43 222 aa4.67□□□□□ -1.66
CCDC110-202ENST00000393540 BRWD3Q6RI45 1802 aa4.67□□□□□ -1.66
CCDC110-202ENST00000393540 MYH14Q7Z406 1995 aaKnown RBP4.67□□□□□ -1.66
CCDC110-202ENST00000393540 CICQ96RK0 1608 aaPredicted RBP4.67□□□□□ -1.66
CCDC110-202ENST00000393540 H7C1W4 665 aa4.66□□□□□ -1.66
CCDC110-202ENST00000393540 PTCD1O75127 700 aaKnown RBP4.66□□□□□ -1.66
CCDC110-202ENST00000393540 RAB11FIP3O75154 756 aa4.66□□□□□ -1.66
CCDC110-202ENST00000393540 SURF6O75683 361 aaKnown RBP4.66□□□□□ -1.66
CCDC110-202ENST00000393540 MX1P20591 662 aa4.66□□□□□ -1.66
CCDC110-202ENST00000393540 FOXO4P98177 505 aa4.66□□□□□ -1.66
CCDC110-202ENST00000393540 PLBD2Q8NHP8 589 aa4.66□□□□□ -1.66
CCDC110-202ENST00000393540 KLHDC4Q8TBB5 520 aa4.66□□□□□ -1.66
CCDC110-202ENST00000393540 BCL11AQ9H165 835 aa4.66□□□□□ -1.66
CCDC110-202ENST00000393540 ATP5J2-PTCD1G3V325 749 aa4.66□□□□□ -1.66
CCDC110-202ENST00000393540 RABL6Q3YEC7 729 aaPredicted RBP4.66□□□□□ -1.66
CCDC110-202ENST00000393540 RIC3Q7Z5B4 369 aa4.66□□□□□ -1.66
CCDC110-202ENST00000393540 AOX1Q06278 1338 aa4.66□□□□□ -1.66
CCDC110-202ENST00000393540 ERBB4Q15303 1308 aa4.66□□□□□ -1.66
CCDC110-202ENST00000393540 SPATA31A5Q5VU36 1347 aa4.66□□□□□ -1.66
CCDC110-202ENST00000393540 SPATA31A7Q8IWB4 1347 aa4.66□□□□□ -1.66
CCDC110-202ENST00000393540 ANKRD36CQ5JPF3 1778 aa4.66□□□□□ -1.66
CCDC110-202ENST00000393540 NUP98P52948 1817 aa4.66□□□□□ -1.66
CCDC110-202ENST00000393540 CHMLP26374 656 aa4.66□□□□□ -1.66
CCDC110-202ENST00000393540 SF3B2Q13435 895 aaKnown RBP4.66□□□□□ -1.66
CCDC110-202ENST00000393540 EZH2Q15910 746 aaKnown RBP4.66□□□□□ -1.66
CCDC110-202ENST00000393540 DNAJC10Q8IXB1 793 aa4.66□□□□□ -1.66
CCDC110-202ENST00000393540 MARCH10Q8NA82 808 aaPredicted RBP4.66□□□□□ -1.66
CCDC110-202ENST00000393540 TLR7Q9NYK1 1049 aaKnown RBP4.66□□□□□ -1.66
CCDC110-202ENST00000393540 C9orf78Q9NZ63 289 aaPredicted RBP4.66□□□□□ -1.66
CCDC110-202ENST00000393540 ATRNO75882 1429 aa4.66□□□□□ -1.66
CCDC110-202ENST00000393540 COL5A3P25940 1745 aaPredicted RBP4.65□□□□□ -1.66
CCDC110-202ENST00000393540 SYNGAP1Q96PV0 1343 aa4.65□□□□□ -1.66
CCDC110-202ENST00000393540 DDX58O95786 925 aaKnown RBP4.65□□□□□ -1.66
CCDC110-202ENST00000393540 CYP19A1P11511 503 aaPredicted RBP4.65□□□□□ -1.66
CCDC110-202ENST00000393540 PTPN12Q05209 780 aaKnown RBP4.65□□□□□ -1.66
CCDC110-202ENST00000393540 KRT27Q7Z3Y8 459 aa4.65□□□□□ -1.66
CCDC110-202ENST00000393540 SNX21Q969T3 373 aa4.65□□□□□ -1.66
CCDC110-202ENST00000393540 EAF2Q96CJ1 260 aaPredicted RBP4.65□□□□□ -1.66
CCDC110-202ENST00000393540 ISCA1Q9BUE6 129 aa4.65□□□□□ -1.66
CCDC110-202ENST00000393540 TMOD3Q9NYL9 352 aa4.65□□□□□ -1.66
CCDC110-202ENST00000393540 MAP4K4O95819 1239 aaPredicted RBP4.65□□□□□ -1.67
CCDC110-202ENST00000393540 NBR1Q14596 966 aa4.65□□□□□ -1.67
CCDC110-202ENST00000393540 VSIG10Q8N0Z9 540 aa4.65□□□□□ -1.67
CCDC110-202ENST00000393540 KIF1BPQ96EK5 621 aa4.65□□□□□ -1.67
CCDC110-202ENST00000393540 IL17RAQ96F46 866 aa4.65□□□□□ -1.67
CCDC110-202ENST00000393540 ESYT1Q9BSJ8 1104 aa4.65□□□□□ -1.67
CCDC110-202ENST00000393540 PDGFDQ9GZP0 370 aaPredicted RBP4.65□□□□□ -1.67
CCDC110-202ENST00000393540 KAT6BQ8WYB5 2073 aa4.64□□□□□ -1.67
CCDC110-202ENST00000393540 TRIM37O94972 964 aa4.64□□□□□ -1.67
CCDC110-202ENST00000393540 PRIM1P49642 420 aaKnown RBP4.64□□□□□ -1.67
CCDC110-202ENST00000393540 HLFQ16534 295 aa4.64□□□□□ -1.67
CCDC110-202ENST00000393540 PTF1AQ7RTS3 328 aa4.64□□□□□ -1.67
CCDC110-202ENST00000393540 ATG9AQ7Z3C6 839 aa4.64□□□□□ -1.67
CCDC110-202ENST00000393540 UBE3BQ7Z3V4 1068 aa4.64□□□□□ -1.67
CCDC110-202ENST00000393540 ZBTB3Q9H5J0 574 aa4.64□□□□□ -1.67
CCDC110-202ENST00000393540 COPRSQ9NQ92 184 aa4.64□□□□□ -1.67
CCDC110-202ENST00000393540 COL4A1P02462 1669 aa4.64□□□□□ -1.67
CCDC110-202ENST00000393540 THSD7AQ9UPZ6 1657 aa4.64□□□□□ -1.67
CCDC110-202ENST00000393540 ZNF831Q5JPB2 1677 aa4.64□□□□□ -1.67
CCDC110-202ENST00000393540 A0A087WZG4 1122 aa4.64□□□□□ -1.67
CCDC110-202ENST00000393540 EXOC5O00471 708 aa4.64□□□□□ -1.67
CCDC110-202ENST00000393540 YY1P25490 414 aa4.64□□□□□ -1.67
CCDC110-202ENST00000393540 NFKBIBQ15653 356 aa4.64□□□□□ -1.67
CCDC110-202ENST00000393540 INTS5Q6P9B9 1019 aaKnown RBP4.64□□□□□ -1.67
CCDC110-202ENST00000393540 BARGINQ6ZT62 677 aa4.64□□□□□ -1.67
CCDC110-202ENST00000393540 ERICH6Q7L0X2 663 aa4.64□□□□□ -1.67
CCDC110-202ENST00000393540 SYNE4Q8N205 404 aa4.64□□□□□ -1.67
CCDC110-202ENST00000393540 UPF2Q9HAU5 1272 aaKnown RBP4.64□□□□□ -1.67
CCDC110-202ENST00000393540 PALD1Q9ULE6 856 aa4.64□□□□□ -1.67
CCDC110-202ENST00000393540 THRAP3Q9Y2W1 955 aaKnown RBP4.64□□□□□ -1.67
CCDC110-202ENST00000393540 CASZ1Q86V15 1759 aa4.63□□□□□ -1.67
CCDC110-202ENST00000393540 MYH3P11055 1940 aa4.63□□□□□ -1.67
CCDC110-202ENST00000393540 ERC2O15083 957 aa4.63□□□□□ -1.67
CCDC110-202ENST00000393540 KCNQ2O43526 872 aa4.63□□□□□ -1.67
CCDC110-202ENST00000393540 NEXNQ0ZGT2 675 aa4.63□□□□□ -1.67
CCDC110-202ENST00000393540 TFCP2Q12800 502 aa4.63□□□□□ -1.67
CCDC110-202ENST00000393540 TRIM28Q13263 835 aaKnown RBP4.63□□□□□ -1.67
CCDC110-202ENST00000393540 TCIRG1Q13488 830 aa4.63□□□□□ -1.67
CCDC110-202ENST00000393540 ITPK1Q13572 414 aa4.63□□□□□ -1.67
CCDC110-202ENST00000393540 LMBR1LQ6UX01 489 aa4.63□□□□□ -1.67
CCDC110-202ENST00000393540 SPRYD3Q8NCJ5 442 aa4.63□□□□□ -1.67
CCDC110-202ENST00000393540 LSG1Q9H089 658 aaKnown RBP4.63□□□□□ -1.67
CCDC110-202ENST00000393540 CCDC8Q9H0W5 538 aaPredicted RBP4.63□□□□□ -1.67
CCDC110-202ENST00000393540 SIL1Q9H173 461 aa4.63□□□□□ -1.67
CCDC110-202ENST00000393540 ZBTB1Q9Y2K1 713 aa4.63□□□□□ -1.67
CCDC110-202ENST00000393540 DDX60Q8IY21 1712 aaKnown RBP4.63□□□□□ -1.67
CCDC110-202ENST00000393540 BCORQ6W2J9 1755 aa4.62□□□□□ -1.67
CCDC110-202ENST00000393540 TTC41PQ6P2S7 1318 aa4.62□□□□□ -1.67
CCDC110-202ENST00000393540 FRAT2O75474 233 aaPredicted RBP4.62□□□□□ -1.67
CCDC110-202ENST00000393540 CHGBP05060 677 aa4.62□□□□□ -1.67
CCDC110-202ENST00000393540 COL9A3Q14050 684 aaPredicted RBP4.62□□□□□ -1.67
CCDC110-202ENST00000393540 HSP90AB4PQ58FF6 505 aa4.62□□□□□ -1.67
CCDC110-202ENST00000393540 RTL5Q5HYW3 569 aaPredicted RBP4.62□□□□□ -1.67
CCDC110-202ENST00000393540 AACSQ86V21 672 aa4.62□□□□□ -1.67
CCDC110-202ENST00000393540 CCDC191Q8NCU4 936 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms