RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.4■□□□□ 0.54
MKS1-202ENST00000393119 SPRYD3Q8NCJ5 442 aa18.39■□□□□ 0.53
MKS1-202ENST00000393119 PI4K2BQ8TCG2 481 aa18.39■□□□□ 0.53
MKS1-202ENST00000393119 IL25Q9H293 177 aa18.39■□□□□ 0.53
MKS1-202ENST00000393119 AFF2P51816 1311 aa18.39■□□□□ 0.53
MKS1-202ENST00000393119 DDRGK1Q96HY6 314 aa18.39■□□□□ 0.53
MKS1-202ENST00000393119 ISCA1Q9BUE6 129 aa18.39■□□□□ 0.53
MKS1-202ENST00000393119 FAM177BA6PVY3 158 aa18.38■□□□□ 0.53
MKS1-202ENST00000393119 CRKLP46109 303 aaKnown RBP18.38■□□□□ 0.53
MKS1-202ENST00000393119 G3BP1Q13283 466 aaKnown RBP eCLIP18.38■□□□□ 0.53
MKS1-202ENST00000393119 KIF6Q6ZMV9 814 aa18.38■□□□□ 0.53
MKS1-202ENST00000393119 AACSQ86V21 672 aa18.38■□□□□ 0.53
MKS1-202ENST00000393119 STAP2Q9UGK3 403 aa18.38■□□□□ 0.53
MKS1-202ENST00000393119 NWD2Q9ULI1 1742 aa18.38■□□□□ 0.53
MKS1-202ENST00000393119 AFDNP55196 1824 aaKnown RBP18.38■□□□□ 0.53
MKS1-202ENST00000393119 SPATA31A6Q5VVP1 1343 aa18.37■□□□□ 0.53
MKS1-202ENST00000393119 PALLDQ8WX93 1383 aa18.37■□□□□ 0.53
MKS1-202ENST00000393119 RABL6Q3YEC7 729 aaPredicted RBP18.37■□□□□ 0.53
MKS1-202ENST00000393119 KIF2CQ99661 725 aa18.37■□□□□ 0.53
MKS1-202ENST00000393119 MAP3K15Q6ZN16 1313 aa18.37■□□□□ 0.53
MKS1-202ENST00000393119 DZIP3Q86Y13 1208 aaKnown RBP18.37■□□□□ 0.53
MKS1-202ENST00000393119 CCDC191Q8NCU4 936 aa18.37■□□□□ 0.53
MKS1-202ENST00000393119 TFCP2Q12800 502 aa18.36■□□□□ 0.53
MKS1-202ENST00000393119 NUP188Q5SRE5 1749 aa18.36■□□□□ 0.53
MKS1-202ENST00000393119 CLASRPQ8N2M8 674 aaKnown RBP18.35■□□□□ 0.53
MKS1-202ENST00000393119 TBC1D2Q9BYX2 928 aa18.35■□□□□ 0.53
MKS1-202ENST00000393119 NDUFB9Q9Y6M9 179 aa18.35■□□□□ 0.53
MKS1-202ENST00000393119 GIGYF2Q6Y7W6 1299 aaKnown RBP18.35■□□□□ 0.53
MKS1-202ENST00000393119 GJD4Q96KN9 370 aaPredicted RBP18.35■□□□□ 0.53
MKS1-202ENST00000393119 PUS3Q9BZE2 481 aaKnown RBP18.35■□□□□ 0.53
MKS1-202ENST00000393119 LRRC24Q50LG9 513 aa18.34■□□□□ 0.53
MKS1-202ENST00000393119 HSP90AB4PQ58FF6 505 aa18.34■□□□□ 0.53
MKS1-202ENST00000393119 TJP1Q07157 1748 aa18.34■□□□□ 0.53
MKS1-202ENST00000393119 UBN2Q6ZU65 1347 aa18.33■□□□□ 0.53
MKS1-202ENST00000393119 IFIT2P09913 472 aaKnown RBP18.33■□□□□ 0.53
MKS1-202ENST00000393119 NLRP10Q86W26 655 aa18.33■□□□□ 0.53
MKS1-202ENST00000393119 LINC00116Q8NCU8 138 aa18.33■□□□□ 0.53
MKS1-202ENST00000393119 CCDC87Q9NVE4 849 aa18.33■□□□□ 0.53
MKS1-202ENST00000393119 HDAC5Q9UQL6 1122 aa18.33■□□□□ 0.53
MKS1-202ENST00000393119 CD2BP2O95400 341 aaKnown RBP18.33■□□□□ 0.52
MKS1-202ENST00000393119 RBM25P49756 843 aaKnown RBP18.33■□□□□ 0.52
MKS1-202ENST00000393119 EIF5P55010 431 aaKnown RBP18.33■□□□□ 0.52
MKS1-202ENST00000393119 DAXXQ9UER7 740 aaPredicted RBP18.33■□□□□ 0.52
MKS1-202ENST00000393119 CHMLP26374 656 aa18.32■□□□□ 0.52
MKS1-202ENST00000393119 EDC3Q96F86 508 aaKnown RBP18.32■□□□□ 0.52
MKS1-202ENST00000393119 USP26Q9BXU7 913 aa18.32■□□□□ 0.52
MKS1-202ENST00000393119 COPRSQ9NQ92 184 aa18.32■□□□□ 0.52
MKS1-202ENST00000393119 IL6STP40189 918 aaPredicted RBP18.32■□□□□ 0.52
MKS1-202ENST00000393119 AMIGO3Q86WK7 504 aa18.31■□□□□ 0.52
MKS1-202ENST00000393119 ATG9AQ7Z3C6 839 aa18.31■□□□□ 0.52
MKS1-202ENST00000393119 SLKQ9H2G2 1235 aaPredicted RBP18.31■□□□□ 0.52
MKS1-202ENST00000393119 BOLA2Q9H3K6 86 aa18.31■□□□□ 0.52
MKS1-202ENST00000393119 CHGBP05060 677 aa18.3■□□□□ 0.52
MKS1-202ENST00000393119 ERC1Q8IUD2 1116 aa18.3■□□□□ 0.52
MKS1-202ENST00000393119 SEPT12Q8IYM1 358 aa18.3■□□□□ 0.52
MKS1-202ENST00000393119 ECHDC1Q9NTX5 307 aa18.3■□□□□ 0.52
MKS1-202ENST00000393119 TIMM10P62072 90 aa18.29■□□□□ 0.52
MKS1-202ENST00000393119 ZBTB38Q8NAP3 1195 aaPredicted RBP18.29■□□□□ 0.52
MKS1-202ENST00000393119 QTRT2Q9H974 415 aaKnown RBP18.29■□□□□ 0.52
MKS1-202ENST00000393119 TRMT112Q9UI30 125 aaKnown RBP18.29■□□□□ 0.52
MKS1-202ENST00000393119 DBNLQ9UJU6 430 aaKnown RBP18.29■□□□□ 0.52
MKS1-202ENST00000393119 SUSD4Q5VX71 490 aa18.28■□□□□ 0.52
MKS1-202ENST00000393119 DBNDD2Q9BQY9 259 aa18.28■□□□□ 0.52
MKS1-202ENST00000393119 ESYT1Q9BSJ8 1104 aa18.28■□□□□ 0.52
MKS1-202ENST00000393119 PCCAP05165 728 aaPredicted RBP18.28■□□□□ 0.52
MKS1-202ENST00000393119 TRIM28Q13263 835 aaKnown RBP18.28■□□□□ 0.52
MKS1-202ENST00000393119 TNNI3KQ59H18 835 aa18.28■□□□□ 0.52
MKS1-202ENST00000393119 FPGT-TNNI3KV9GXZ4 949 aa18.28■□□□□ 0.52
MKS1-202ENST00000393119 MYH14Q7Z406 1995 aaKnown RBP18.28■□□□□ 0.52
MKS1-202ENST00000393119 HCLS1P14317 486 aaPredicted RBP18.27■□□□□ 0.52
MKS1-202ENST00000393119 ERC2O15083 957 aa18.27■□□□□ 0.52
MKS1-202ENST00000393119 CAMTA2O94983 1202 aa18.27■□□□□ 0.52
MKS1-202ENST00000393119 GREM2Q9H772 168 aa18.27■□□□□ 0.52
MKS1-202ENST00000393119 CWC27Q6UX04 472 aaKnown RBP18.26■□□□□ 0.51
MKS1-202ENST00000393119 COL15A1P39059 1388 aa18.26■□□□□ 0.51
MKS1-202ENST00000393119 IRS4O14654 1257 aaPredicted RBP18.26■□□□□ 0.51
MKS1-202ENST00000393119 CASC1Q6TDU7 716 aa18.26■□□□□ 0.51
MKS1-202ENST00000393119 ZNF34Q8IZ26 560 aa18.26■□□□□ 0.51
MKS1-202ENST00000393119 NEUROD6Q96NK8 337 aa18.26■□□□□ 0.51
MKS1-202ENST00000393119 USP42Q9H9J4 1324 aaKnown RBP18.26■□□□□ 0.51
MKS1-202ENST00000393119 GLRX3O76003 335 aaKnown RBP18.25■□□□□ 0.51
MKS1-202ENST00000393119 ANO2Q9NQ90 1003 aa18.25■□□□□ 0.51
MKS1-202ENST00000393119 PALD1Q9ULE6 856 aa18.25■□□□□ 0.51
MKS1-202ENST00000393119 AOX1Q06278 1338 aa18.25■□□□□ 0.51
MKS1-202ENST00000393119 BICDL1Q6ZP65 573 aa18.25■□□□□ 0.51
MKS1-202ENST00000393119 SMARCC1Q92922 1105 aaPredicted RBP18.25■□□□□ 0.51
MKS1-202ENST00000393119 TUBGCP6Q96RT7 1819 aa18.25■□□□□ 0.51
MKS1-202ENST00000393119 TTC41PQ6P2S7 1318 aa18.25■□□□□ 0.51
MKS1-202ENST00000393119 TTLL11Q8NHH1 800 aa18.24■□□□□ 0.51
MKS1-202ENST00000393119 FOXD4L1Q9NU39 408 aa18.24■□□□□ 0.51
MKS1-202ENST00000393119 ERVV-1B6SEH8 477 aa18.24■□□□□ 0.51
MKS1-202ENST00000393119 CCDC57Q2TAC2 916 aa18.24■□□□□ 0.51
MKS1-202ENST00000393119 SLFNL1Q499Z3 407 aa18.24■□□□□ 0.51
MKS1-202ENST00000393119 RTN4Q9NQC3 1192 aaKnown RBP18.24■□□□□ 0.51
MKS1-202ENST00000393119 SRP68Q9UHB9 627 aaKnown RBP18.24■□□□□ 0.51
MKS1-202ENST00000393119 TRPC5Q9UL62 973 aaPredicted RBP18.24■□□□□ 0.51
MKS1-202ENST00000393119 EYA2O00167 538 aa18.23■□□□□ 0.51
MKS1-202ENST00000393119 CNTROBQ8N137 903 aa18.23■□□□□ 0.51
MKS1-202ENST00000393119 CSF1RP07333 972 aa18.23■□□□□ 0.51
MKS1-202ENST00000393119 BECN1Q14457 450 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms