RNA–Protein interactions for RNA: ENST00000392859.7

ARCN1-203, Transcript of archain 1, humanhuman

TSL 2 BASIC

Gene ARCN1, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1-203ENST00000392859 PROM2Q8N271 834 aa20.6■□□□□ 0.89
ARCN1-203ENST00000392859 SCN7AQ01118 1682 aa20.6■□□□□ 0.89
ARCN1-203ENST00000392859 RPS6KA4O75676 772 aa20.59■□□□□ 0.89
ARCN1-203ENST00000392859 PHF14O94880 888 aa20.59■□□□□ 0.89
ARCN1-203ENST00000392859 APBA3O96018 575 aa20.59■□□□□ 0.89
ARCN1-203ENST00000392859 TRIM28Q13263 835 aaKnown RBP20.58■□□□□ 0.89
ARCN1-203ENST00000392859 MTX1Q13505 466 aa20.58■□□□□ 0.89
ARCN1-203ENST00000392859 FAM89AQ96GI7 184 aa20.58■□□□□ 0.89
ARCN1-203ENST00000392859 SRP68Q9UHB9 627 aaKnown RBP20.58■□□□□ 0.89
ARCN1-203ENST00000392859 UBR3Q6ZT12 1888 aa20.58■□□□□ 0.89
ARCN1-203ENST00000392859 TXNRD1Q16881 649 aa20.58■□□□□ 0.88
ARCN1-203ENST00000392859 HSP90AB3PQ58FF7 597 aa20.58■□□□□ 0.88
ARCN1-203ENST00000392859 AK7Q96M32 723 aa20.58■□□□□ 0.88
ARCN1-203ENST00000392859 PA2G4Q9UQ80 394 aaKnown RBP20.58■□□□□ 0.88
ARCN1-203ENST00000392859 FAM177BA6PVY3 158 aa20.57■□□□□ 0.88
ARCN1-203ENST00000392859 ILDR1Q86SU0 546 aaPredicted RBP20.57■□□□□ 0.88
ARCN1-203ENST00000392859 ZNF34Q8IZ26 560 aa20.57■□□□□ 0.88
ARCN1-203ENST00000392859 RTCBQ9Y3I0 505 aaKnown RBP20.57■□□□□ 0.88
ARCN1-203ENST00000392859 FOXO4P98177 505 aa20.56■□□□□ 0.88
ARCN1-203ENST00000392859 SLC27A3Q5K4L6 730 aa20.56■□□□□ 0.88
ARCN1-203ENST00000392859 HDAC5Q9UQL6 1122 aa20.56■□□□□ 0.88
ARCN1-203ENST00000392859 SURF6O75683 361 aaKnown RBP20.56■□□□□ 0.88
ARCN1-203ENST00000392859 C16orf71Q8IYS4 520 aaPredicted RBP20.56■□□□□ 0.88
ARCN1-203ENST00000392859 KLHDC4Q8TBB5 520 aa20.56■□□□□ 0.88
ARCN1-203ENST00000392859 PCCAP05165 728 aaPredicted RBP20.55■□□□□ 0.88
ARCN1-203ENST00000392859 USPL1Q5W0Q7 1092 aa20.55■□□□□ 0.88
ARCN1-203ENST00000392859 OTUD7AQ8TE49 926 aaPredicted RBP20.55■□□□□ 0.88
ARCN1-203ENST00000392859 ARHGEF1Q92888 912 aaKnown RBP20.55■□□□□ 0.88
ARCN1-203ENST00000392859 BCL2L12Q9HB09 334 aa20.55■□□□□ 0.88
ARCN1-203ENST00000392859 RABL6Q3YEC7 729 aaPredicted RBP20.54■□□□□ 0.88
ARCN1-203ENST00000392859 SUSD4Q5VX71 490 aa20.54■□□□□ 0.88
ARCN1-203ENST00000392859 LMBR1LQ6UX01 489 aa20.54■□□□□ 0.88
ARCN1-203ENST00000392859 ZBTB38Q8NAP3 1195 aaPredicted RBP20.54■□□□□ 0.88
ARCN1-203ENST00000392859 NIP7Q9Y221 180 aaKnown RBP eCLIP20.54■□□□□ 0.88
ARCN1-203ENST00000392859 TSHZ2Q9NRE2 1034 aa20.53■□□□□ 0.88
ARCN1-203ENST00000392859 TRMT112Q9UI30 125 aaKnown RBP20.53■□□□□ 0.88
ARCN1-203ENST00000392859 CHMP3Q9Y3E7 222 aa20.53■□□□□ 0.88
ARCN1-203ENST00000392859 NARFQ9UHQ1 456 aa20.53■□□□□ 0.88
ARCN1-203ENST00000392859 PLSCR1O15162 318 aa20.52■□□□□ 0.88
ARCN1-203ENST00000392859 BICDL1Q6ZP65 573 aa20.52■□□□□ 0.88
ARCN1-203ENST00000392859 CCDC85AQ96PX6 553 aaPredicted RBP20.52■□□□□ 0.88
ARCN1-203ENST00000392859 SIL1Q9H173 461 aa20.52■□□□□ 0.88
ARCN1-203ENST00000392859 MYH3P11055 1940 aa20.52■□□□□ 0.88
ARCN1-203ENST00000392859 TUBGCP6Q96RT7 1819 aa20.52■□□□□ 0.87
ARCN1-203ENST00000392859 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.51■□□□□ 0.87
ARCN1-203ENST00000392859 TBC1D9BQ66K14 1250 aa20.51■□□□□ 0.87
ARCN1-203ENST00000392859 IL1RAPL2Q9NP60 686 aa20.51■□□□□ 0.87
ARCN1-203ENST00000392859 ZNF652Q9Y2D9 606 aa20.51■□□□□ 0.87
ARCN1-203ENST00000392859 RFX5P48382 616 aaPredicted RBP20.5■□□□□ 0.87
ARCN1-203ENST00000392859 LRRCC1Q9C099 1032 aa20.5■□□□□ 0.87
ARCN1-203ENST00000392859 ZPR1O75312 459 aa20.5■□□□□ 0.87
ARCN1-203ENST00000392859 ZNF827Q17R98 1081 aa20.5■□□□□ 0.87
ARCN1-203ENST00000392859 TRAPPC3LQ5T215 181 aa20.5■□□□□ 0.87
ARCN1-203ENST00000392859 ZBTB47Q9UFB7 747 aaPredicted RBP20.5■□□□□ 0.87
ARCN1-203ENST00000392859 DDX60Q8IY21 1712 aaKnown RBP20.49■□□□□ 0.87
ARCN1-203ENST00000392859 CDHR2Q9BYE9 1310 aa20.49■□□□□ 0.87
ARCN1-203ENST00000392859 USP42Q9H9J4 1324 aaKnown RBP20.49■□□□□ 0.87
ARCN1-203ENST00000392859 IRS4O14654 1257 aaPredicted RBP20.49■□□□□ 0.87
ARCN1-203ENST00000392859 RFC4P35249 363 aa20.49■□□□□ 0.87
ARCN1-203ENST00000392859 OS9Q13438 667 aaPredicted RBP20.49■□□□□ 0.87
ARCN1-203ENST00000392859 NUTM1Q86Y26 1132 aa20.49■□□□□ 0.87
ARCN1-203ENST00000392859 NOP58Q9Y2X3 529 aaKnown RBP20.49■□□□□ 0.87
ARCN1-203ENST00000392859 RGPD3A6NKT7 1758 aaPredicted RBP20.48■□□□□ 0.87
ARCN1-203ENST00000392859 RGPD4Q7Z3J3 1758 aa20.48■□□□□ 0.87
ARCN1-203ENST00000392859 NTSR2O95665 410 aa20.48■□□□□ 0.87
ARCN1-203ENST00000392859 CLEC4GQ6UXB4 293 aa20.48■□□□□ 0.87
ARCN1-203ENST00000392859 UTP14AQ9BVJ6 771 aaKnown RBP20.48■□□□□ 0.87
ARCN1-203ENST00000392859 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.48■□□□□ 0.87
ARCN1-203ENST00000392859 HCLS1P14317 486 aaPredicted RBP20.47■□□□□ 0.87
ARCN1-203ENST00000392859 FAM161AQ3B820 660 aa20.47■□□□□ 0.87
ARCN1-203ENST00000392859 RHPN1Q8TCX5 695 aa20.47■□□□□ 0.87
ARCN1-203ENST00000392859 COL24A1Q17RW2 1714 aa20.47■□□□□ 0.87
ARCN1-203ENST00000392859 PTPN12Q05209 780 aaKnown RBP20.47■□□□□ 0.87
ARCN1-203ENST00000392859 PARP10Q53GL7 1025 aa20.47■□□□□ 0.87
ARCN1-203ENST00000392859 PLEKHM2Q8IWE5 1019 aa20.47■□□□□ 0.87
ARCN1-203ENST00000392859 ZNF594Q96JF6 807 aaPredicted RBP20.47■□□□□ 0.87
ARCN1-203ENST00000392859 PLA2G12BQ9BX93 195 aa20.47■□□□□ 0.87
ARCN1-203ENST00000392859 SH3TC1Q8TE82 1336 aa20.46■□□□□ 0.87
ARCN1-203ENST00000392859 RAB11FIP3O75154 756 aa20.46■□□□□ 0.87
ARCN1-203ENST00000392859 EN1Q05925 392 aaPredicted RBP20.46■□□□□ 0.87
ARCN1-203ENST00000392859 TSHZ3Q63HK5 1081 aa20.46■□□□□ 0.87
ARCN1-203ENST00000392859 LAMB2P55268 1798 aa20.46■□□□□ 0.87
ARCN1-203ENST00000392859 CASZ1Q86V15 1759 aa20.46■□□□□ 0.87
ARCN1-203ENST00000392859 SASH1O94885 1247 aa20.44■□□□□ 0.86
ARCN1-203ENST00000392859 CTSWP56202 376 aa20.44■□□□□ 0.86
ARCN1-203ENST00000392859 EZH2Q15910 746 aaKnown RBP20.44■□□□□ 0.86
ARCN1-203ENST00000392859 AKT1S1Q96B36 256 aa20.44■□□□□ 0.86
ARCN1-203ENST00000392859 KIF1BPQ96EK5 621 aa20.44■□□□□ 0.86
ARCN1-203ENST00000392859 ADRA2BP18089 450 aa20.44■□□□□ 0.86
ARCN1-203ENST00000392859 G3BP1Q13283 466 aaKnown RBP eCLIP20.44■□□□□ 0.863e-7■■□□□ 12.6
ARCN1-203ENST00000392859 GREM2Q9H772 168 aa20.44■□□□□ 0.86
ARCN1-203ENST00000392859 COPRSQ9NQ92 184 aa20.44■□□□□ 0.86
ARCN1-203ENST00000392859 PDE8AO60658 829 aa20.43■□□□□ 0.86
ARCN1-203ENST00000392859 CSF1RP07333 972 aa20.43■□□□□ 0.86
ARCN1-203ENST00000392859 SSFA2P28290 1259 aa20.43■□□□□ 0.86
ARCN1-203ENST00000392859 C8orf34Q49A92 452 aa20.43■□□□□ 0.86
ARCN1-203ENST00000392859 ERFEQ4G0M1 354 aa20.43■□□□□ 0.86
ARCN1-203ENST00000392859 HSP90AB4PQ58FF6 505 aa20.43■□□□□ 0.86
ARCN1-203ENST00000392859 CCDC24Q8N4L8 307 aa20.43■□□□□ 0.86
ARCN1-203ENST00000392859 TTLL11Q8NHH1 800 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms