RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 SIL1Q9H173 461 aa14.79□□□□□ -0.04
RFC5-201ENST00000392542 SNRKQ9NRH2 765 aa14.79□□□□□ -0.04
RFC5-201ENST00000392542 PDRG1Q9NUG6 133 aa14.79□□□□□ -0.04
RFC5-201ENST00000392542 TLR7Q9NYK1 1049 aaKnown RBP14.79□□□□□ -0.04
RFC5-201ENST00000392542 STRCP1A6NGW2 1772 aa14.79□□□□□ -0.04
RFC5-201ENST00000392542 TNS3Q68CZ2 1445 aa14.79□□□□□ -0.04
RFC5-201ENST00000392542 ZSCAN22P10073 491 aaPredicted RBP14.78□□□□□ -0.04
RFC5-201ENST00000392542 NMIQ13287 307 aaPredicted RBP14.78□□□□□ -0.04
RFC5-201ENST00000392542 ADCK5Q3MIX3 580 aa14.78□□□□□ -0.04
RFC5-201ENST00000392542 EPHA10Q5JZY3 1008 aa14.78□□□□□ -0.04
RFC5-201ENST00000392542 TMEM87AQ8NBN3 555 aa14.78□□□□□ -0.04
RFC5-201ENST00000392542 SYAP1Q96A49 352 aaPredicted RBP14.78□□□□□ -0.04
RFC5-201ENST00000392542 ZSCAN31Q96LW9 406 aaPredicted RBP14.78□□□□□ -0.04
RFC5-201ENST00000392542 SMC3Q9UQE7 1217 aa14.78□□□□□ -0.04
RFC5-201ENST00000392542 CYP46A1Q9Y6A2 500 aa14.78□□□□□ -0.04
RFC5-201ENST00000392542 FOXD4L6Q3SYB3 417 aaPredicted RBP14.78□□□□□ -0.04
RFC5-201ENST00000392542 FOXD4L3Q6VB84 417 aaPredicted RBP14.78□□□□□ -0.04
RFC5-201ENST00000392542 ANKRD13DQ6ZTN6 518 aa14.78□□□□□ -0.04
RFC5-201ENST00000392542 USP48Q86UV5 1035 aa14.78□□□□□ -0.04
RFC5-201ENST00000392542 FAM227BQ96M60 508 aa14.78□□□□□ -0.04
RFC5-201ENST00000392542 LARP6Q9BRS8 491 aaKnown RBP14.78□□□□□ -0.04
RFC5-201ENST00000392542 RBM8AQ9Y5S9 174 aaKnown RBP14.78□□□□□ -0.04
RFC5-201ENST00000392542 ARFGEF2Q9Y6D5 1785 aa14.78□□□□□ -0.04
RFC5-201ENST00000392542 LAMB4A4D0S4 1761 aa14.77□□□□□ -0.04
RFC5-201ENST00000392542 CYP27B1O15528 508 aa14.77□□□□□ -0.04
RFC5-201ENST00000392542 STX6O43752 255 aa14.77□□□□□ -0.04
RFC5-201ENST00000392542 LARGE1O95461 756 aa14.77□□□□□ -0.04
RFC5-201ENST00000392542 ZKSCAN1P17029 563 aaPredicted RBP14.77□□□□□ -0.04
RFC5-201ENST00000392542 MAP4K1Q92918 833 aa14.77□□□□□ -0.04
RFC5-201ENST00000392542 PDLIM2Q96JY6 352 aa14.77□□□□□ -0.04
RFC5-201ENST00000392542 FMNL2Q96PY5 1086 aa14.77□□□□□ -0.04
RFC5-201ENST00000392542 USP16Q9Y5T5 823 aa14.77□□□□□ -0.04
RFC5-201ENST00000392542 GADD45BO75293 160 aaPredicted RBP14.77□□□□□ -0.05
RFC5-201ENST00000392542 SYT1P21579 422 aa14.77□□□□□ -0.05
RFC5-201ENST00000392542 CREB3L3Q68CJ9 461 aa14.77□□□□□ -0.05
RFC5-201ENST00000392542 KLHDC4Q8TBB5 520 aa14.77□□□□□ -0.05
RFC5-201ENST00000392542 BOLA2Q9H3K6 86 aa14.77□□□□□ -0.05
RFC5-201ENST00000392542 GDPD2Q9HCC8 539 aa14.77□□□□□ -0.05
RFC5-201ENST00000392542 COPRSQ9NQ92 184 aa14.77□□□□□ -0.05
RFC5-201ENST00000392542 SH2B1Q9NRF2 756 aaPredicted RBP14.77□□□□□ -0.05
RFC5-201ENST00000392542 COL15A1P39059 1388 aa14.77□□□□□ -0.05
RFC5-201ENST00000392542 CABLES1Q8TDN4 633 aa14.76□□□□□ -0.05
RFC5-201ENST00000392542 FSD1Q9BTV5 496 aa14.76□□□□□ -0.05
RFC5-201ENST00000392542 PARP4Q9UKK3 1724 aaKnown RBP14.76□□□□□ -0.05
RFC5-201ENST00000392542 GLI3P10071 1580 aa14.76□□□□□ -0.05
RFC5-201ENST00000392542 CHRNA2Q15822 529 aa14.76□□□□□ -0.05
RFC5-201ENST00000392542 CCDC83Q8IWF9 413 aa14.76□□□□□ -0.05
RFC5-201ENST00000392542 MED23Q9ULK4 1368 aa14.76□□□□□ -0.05
RFC5-201ENST00000392542 A0A0D9SFI3 127 aa14.75□□□□□ -0.05
RFC5-201ENST00000392542 F13A1P00488 732 aa14.75□□□□□ -0.05
RFC5-201ENST00000392542 KCNJ4P48050 445 aa14.75□□□□□ -0.05
RFC5-201ENST00000392542 RFX5P48382 616 aaPredicted RBP14.75□□□□□ -0.05
RFC5-201ENST00000392542 HS1BP3Q53T59 392 aa14.75□□□□□ -0.05
RFC5-201ENST00000392542 ZSCAN30Q86W11 494 aa14.75□□□□□ -0.05
RFC5-201ENST00000392542 SLC27A2O14975 620 aa14.75□□□□□ -0.05
RFC5-201ENST00000392542 CPDO75976 1380 aa14.74□□□□□ -0.05
RFC5-201ENST00000392542 JCADQ9P266 1359 aa14.74□□□□□ -0.05
RFC5-201ENST00000392542 PHF14O94880 888 aa14.74□□□□□ -0.05
RFC5-201ENST00000392542 GJB2P29033 226 aa14.74□□□□□ -0.05
RFC5-201ENST00000392542 RABL6Q3YEC7 729 aaPredicted RBP14.74□□□□□ -0.05
RFC5-201ENST00000392542 TSPY26PQ9H489 355 aa14.74□□□□□ -0.05
RFC5-201ENST00000392542 CNPY2Q9Y2B0 182 aa14.74□□□□□ -0.05
RFC5-201ENST00000392542 PSMA5P28066 241 aa14.74□□□□□ -0.05
RFC5-201ENST00000392542 PIP4K2AP48426 406 aaPredicted RBP14.74□□□□□ -0.05
RFC5-201ENST00000392542 CABP4P57796 275 aa14.74□□□□□ -0.05
RFC5-201ENST00000392542 PTPN12Q05209 780 aaKnown RBP14.74□□□□□ -0.05
RFC5-201ENST00000392542 ATP6V1DQ9Y5K8 247 aa14.74□□□□□ -0.05
RFC5-201ENST00000392542 SPATA31A3Q5VYP0 1347 aa14.73□□□□□ -0.05
RFC5-201ENST00000392542 ST3GAL1Q11201 340 aa14.73□□□□□ -0.05
RFC5-201ENST00000392542 CADPS2Q86UW7 1296 aa14.73□□□□□ -0.05
RFC5-201ENST00000392542 NAP1L5Q96NT1 182 aaPredicted RBP14.73□□□□□ -0.05
RFC5-201ENST00000392542 ATP5JP18859 108 aa14.73□□□□□ -0.05
RFC5-201ENST00000392542 ME3Q16798 604 aa14.73□□□□□ -0.05
RFC5-201ENST00000392542 TNNI3KQ59H18 835 aa14.73□□□□□ -0.05
RFC5-201ENST00000392542 RNF20Q5VTR2 975 aa14.73□□□□□ -0.05
RFC5-201ENST00000392542 UBE3BQ7Z3V4 1068 aa14.73□□□□□ -0.05
RFC5-201ENST00000392542 JARID2Q92833 1246 aaPredicted RBP14.73□□□□□ -0.05
RFC5-201ENST00000392542 FPGT-TNNI3KV9GXZ4 949 aa14.73□□□□□ -0.05
RFC5-201ENST00000392542 DDX54Q8TDD1 881 aaKnown RBP14.72□□□□□ -0.05
RFC5-201ENST00000392542 DBNLQ9UJU6 430 aaKnown RBP14.72□□□□□ -0.05
RFC5-201ENST00000392542 MTMR6Q9Y217 621 aa14.72□□□□□ -0.05
RFC5-201ENST00000392542 TFCP2Q12800 502 aa14.72□□□□□ -0.05
RFC5-201ENST00000392542 PLBD2Q8NHP8 589 aa14.72□□□□□ -0.05
RFC5-201ENST00000392542 RFX7Q2KHR2 1363 aa14.71□□□□□ -0.05
RFC5-201ENST00000392542 A0A087WZG4 1122 aa14.71□□□□□ -0.05
RFC5-201ENST00000392542 CASP7P55210 303 aa14.71□□□□□ -0.05
RFC5-201ENST00000392542 UBE2HP62256 183 aa14.71□□□□□ -0.05
RFC5-201ENST00000392542 ALDH8A1Q9H2A2 487 aaPredicted RBP14.71□□□□□ -0.05
RFC5-201ENST00000392542 HMG20BQ9P0W2 317 aa14.71□□□□□ -0.05
RFC5-201ENST00000392542 TPCN1Q9ULQ1 816 aa14.71□□□□□ -0.05
RFC5-201ENST00000392542 ATP5J2-PTCD1G3V325 749 aa14.71□□□□□ -0.06
RFC5-201ENST00000392542 PTCD1O75127 700 aaKnown RBP14.71□□□□□ -0.06
RFC5-201ENST00000392542 MSNP26038 577 aaKnown RBP14.71□□□□□ -0.06
RFC5-201ENST00000392542 CCDC183Q5T5S1 534 aa14.71□□□□□ -0.06
RFC5-201ENST00000392542 BLOC1S2Q6QNY1 142 aa14.71□□□□□ -0.06
RFC5-201ENST00000392542 ZNF589Q86UQ0 364 aaPredicted RBP14.71□□□□□ -0.06
RFC5-201ENST00000392542 ANKRD1Q15327 319 aa14.7□□□□□ -0.06
RFC5-201ENST00000392542 RNF214Q8ND24 703 aa14.7□□□□□ -0.06
RFC5-201ENST00000392542 RPS6KB1P23443 525 aa14.7□□□□□ -0.06
RFC5-201ENST00000392542 CSPP1Q1MSJ5 1256 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms