RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 CDC45O75419 566 aa24.34■■□□□ 1.49
CSNK1D-203ENST00000392334 GZF1Q9H116 711 aaPredicted RBP24.34■■□□□ 1.49
CSNK1D-203ENST00000392334 GRM8O00222 908 aa24.34■■□□□ 1.49
CSNK1D-203ENST00000392334 K7ELQ4 463 aaPredicted RBP24.33■■□□□ 1.49
CSNK1D-203ENST00000392334 SKOR2Q2VWA4 1001 aaPredicted RBP24.33■■□□□ 1.49
CSNK1D-203ENST00000392334 SRGAP3O43295 1099 aa24.32■■□□□ 1.48
CSNK1D-203ENST00000392334 GCKRQ14397 625 aa24.32■■□□□ 1.48
CSNK1D-203ENST00000392334 SUCLG2Q96I99 432 aa24.31■■□□□ 1.48
CSNK1D-203ENST00000392334 ZBTB1Q9Y2K1 713 aa24.31■■□□□ 1.48
CSNK1D-203ENST00000392334 CLEC17AQ6ZS10 378 aa24.3■■□□□ 1.48
CSNK1D-203ENST00000392334 MYH14Q7Z406 1995 aaKnown RBP24.29■■□□□ 1.48
CSNK1D-203ENST00000392334 OTUD7AQ8TE49 926 aaPredicted RBP24.29■■□□□ 1.48
CSNK1D-203ENST00000392334 PLEKHM2Q8IWE5 1019 aa24.28■■□□□ 1.48
CSNK1D-203ENST00000392334 KAZALD1Q96I82 304 aa24.28■■□□□ 1.48
CSNK1D-203ENST00000392334 PANK2Q9BZ23 570 aa24.28■■□□□ 1.48
CSNK1D-203ENST00000392334 GRPEL1Q9HAV7 217 aa24.28■■□□□ 1.48
CSNK1D-203ENST00000392334 LY75O60449 1722 aa24.28■■□□□ 1.48
CSNK1D-203ENST00000392334 CRKLP46109 303 aaKnown RBP24.28■■□□□ 1.48
CSNK1D-203ENST00000392334 SSH3Q8TE77 659 aa24.28■■□□□ 1.48
CSNK1D-203ENST00000392334 BICC1Q9H694 974 aaKnown RBP24.28■■□□□ 1.48
CSNK1D-203ENST00000392334 CD2BP2O95400 341 aaKnown RBP24.27■■□□□ 1.48
CSNK1D-203ENST00000392334 GSPT1P15170 499 aaKnown RBP24.27■■□□□ 1.48
CSNK1D-203ENST00000392334 INTS5Q6P9B9 1019 aaKnown RBP24.27■■□□□ 1.48
CSNK1D-203ENST00000392334 LINC00116Q8NCU8 138 aa24.27■■□□□ 1.48
CSNK1D-203ENST00000392334 CCNL1Q9UK58 526 aaPredicted RBP24.27■■□□□ 1.48
CSNK1D-203ENST00000392334 A0A087WZG4 1122 aa24.27■■□□□ 1.48
CSNK1D-203ENST00000392334 UBE3BQ7Z3V4 1068 aa24.27■■□□□ 1.48
CSNK1D-203ENST00000392334 COL5A3P25940 1745 aaPredicted RBP24.26■■□□□ 1.47
CSNK1D-203ENST00000392334 SURF6O75683 361 aaKnown RBP24.26■■□□□ 1.47
CSNK1D-203ENST00000392334 UTYO14607 1347 aa24.25■■□□□ 1.47
CSNK1D-203ENST00000392334 CICQ96RK0 1608 aaPredicted RBP24.25■■□□□ 1.47
CSNK1D-203ENST00000392334 ARFGEF2Q9Y6D5 1785 aa24.25■■□□□ 1.47
CSNK1D-203ENST00000392334 POLA2Q14181 598 aa24.25■■□□□ 1.47
CSNK1D-203ENST00000392334 TTC22Q5TAA0 569 aa24.25■■□□□ 1.47
CSNK1D-203ENST00000392334 ZNF831Q5JPB2 1677 aa24.25■■□□□ 1.47
CSNK1D-203ENST00000392334 CLCN1P35523 988 aa24.24■■□□□ 1.47
CSNK1D-203ENST00000392334 EPHA10Q5JZY3 1008 aa24.24■■□□□ 1.47
CSNK1D-203ENST00000392334 KIF6Q6ZMV9 814 aa24.24■■□□□ 1.47
CSNK1D-203ENST00000392334 LRRC4BQ9NT99 713 aa24.24■■□□□ 1.47
CSNK1D-203ENST00000392334 CCDC87Q9NVE4 849 aa24.24■■□□□ 1.47
CSNK1D-203ENST00000392334 RABEP1Q15276 862 aa24.23■■□□□ 1.47
CSNK1D-203ENST00000392334 HSP90AA1P07900 732 aaKnown RBP24.23■■□□□ 1.47
CSNK1D-203ENST00000392334 LRRCC1Q9C099 1032 aa24.23■■□□□ 1.47
CSNK1D-203ENST00000392334 TBC1D2BQ9UPU7 963 aa24.23■■□□□ 1.47
CSNK1D-203ENST00000392334 PA2G4Q9UQ80 394 aaKnown RBP24.23■■□□□ 1.47
CSNK1D-203ENST00000392334 HLFQ16534 295 aa24.22■■□□□ 1.47
CSNK1D-203ENST00000392334 IL1RAPL2Q9NP60 686 aa24.22■■□□□ 1.47
CSNK1D-203ENST00000392334 SMIM5Q71RC9 77 aa24.22■■□□□ 1.47
CSNK1D-203ENST00000392334 IBTKQ9P2D0 1353 aaPredicted RBP24.21■■□□□ 1.47
CSNK1D-203ENST00000392334 TAF1LQ8IZX4 1826 aa24.21■■□□□ 1.47
CSNK1D-203ENST00000392334 CWC25Q9NXE8 425 aaPredicted RBP24.21■■□□□ 1.47
CSNK1D-203ENST00000392334 APBA3O96018 575 aa24.2■■□□□ 1.47
CSNK1D-203ENST00000392334 HDAC5Q9UQL6 1122 aa24.2■■□□□ 1.47
CSNK1D-203ENST00000392334 IL6STP40189 918 aaPredicted RBP24.2■■□□□ 1.46
CSNK1D-203ENST00000392334 MTX1Q13505 466 aa24.2■■□□□ 1.46
CSNK1D-203ENST00000392334 KLHDC4Q8TBB5 520 aa24.2■■□□□ 1.46
CSNK1D-203ENST00000392334 EIF5P55010 431 aaKnown RBP24.19■■□□□ 1.46
CSNK1D-203ENST00000392334 TCIRG1Q13488 830 aa24.19■■□□□ 1.46
CSNK1D-203ENST00000392334 TSHZ3Q63HK5 1081 aa24.19■■□□□ 1.46
CSNK1D-203ENST00000392334 PROM2Q8N271 834 aa24.19■■□□□ 1.46
CSNK1D-203ENST00000392334 MAP3K15Q6ZN16 1313 aa24.19■■□□□ 1.46
CSNK1D-203ENST00000392334 GPTP24298 496 aa24.18■■□□□ 1.46
CSNK1D-203ENST00000392334 DZIP3Q86Y13 1208 aaKnown RBP24.18■■□□□ 1.46
CSNK1D-203ENST00000392334 RREB1Q92766 1687 aa24.18■■□□□ 1.46
CSNK1D-203ENST00000392334 OS9Q13438 667 aaPredicted RBP24.18■■□□□ 1.46
CSNK1D-203ENST00000392334 USP26Q9BXU7 913 aa24.18■■□□□ 1.46
CSNK1D-203ENST00000392334 NUP188Q5SRE5 1749 aa24.18■■□□□ 1.46
CSNK1D-203ENST00000392334 AFDNP55196 1824 aaKnown RBP24.18■■□□□ 1.46
CSNK1D-203ENST00000392334 CASP7P55210 303 aa24.17■■□□□ 1.46
CSNK1D-203ENST00000392334 GOLGA6L22H0YM25 854 aa24.17■■□□□ 1.46
CSNK1D-203ENST00000392334 CCDC191Q8NCU4 936 aa24.17■■□□□ 1.46
CSNK1D-203ENST00000392334 SIL1Q9H173 461 aa24.17■■□□□ 1.46
CSNK1D-203ENST00000392334 TNS1Q9HBL0 1735 aaKnown RBP24.16■■□□□ 1.46
CSNK1D-203ENST00000392334 H7C1W4 665 aa24.16■■□□□ 1.46
CSNK1D-203ENST00000392334 TXNRD1Q16881 649 aa24.16■■□□□ 1.46
CSNK1D-203ENST00000392334 AMIGO3Q86WK7 504 aa24.16■■□□□ 1.46
CSNK1D-203ENST00000392334 RHPN1Q8TCX5 695 aa24.16■■□□□ 1.46
CSNK1D-203ENST00000392334 SSFA2P28290 1259 aa24.15■■□□□ 1.46
CSNK1D-203ENST00000392334 GIGYF2Q6Y7W6 1299 aaKnown RBP24.15■■□□□ 1.46
CSNK1D-203ENST00000392334 ISCA1Q9BUE6 129 aa24.15■■□□□ 1.46
CSNK1D-203ENST00000392334 CNTNAP4Q9C0A0 1308 aa24.15■■□□□ 1.46
CSNK1D-203ENST00000392334 GAS2L3Q86XJ1 694 aa24.15■■□□□ 1.46
CSNK1D-203ENST00000392334 CHMP3Q9Y3E7 222 aa24.15■■□□□ 1.46
CSNK1D-203ENST00000392334 NUTM1Q86Y26 1132 aa24.14■■□□□ 1.45
CSNK1D-203ENST00000392334 C4BP0C0L5 1744 aa24.13■■□□□ 1.45
CSNK1D-203ENST00000392334 PLSCR1O15162 318 aa24.13■■□□□ 1.45
CSNK1D-203ENST00000392334 GNPATO15228 680 aa24.13■■□□□ 1.45
CSNK1D-203ENST00000392334 KLHL40Q2TBA0 621 aa24.13■■□□□ 1.45
CSNK1D-203ENST00000392334 FAM89AQ96GI7 184 aa24.13■■□□□ 1.45
CSNK1D-203ENST00000392334 RAB11FIP3O75154 756 aa24.13■■□□□ 1.45
CSNK1D-203ENST00000392334 NUCB2P80303 420 aa24.13■■□□□ 1.45
CSNK1D-203ENST00000392334 LMBR1LQ6UX01 489 aa24.13■■□□□ 1.45
CSNK1D-203ENST00000392334 SYNE4Q8N205 404 aa24.13■■□□□ 1.45
CSNK1D-203ENST00000392334 FOXD4L1Q9NU39 408 aa24.13■■□□□ 1.45
CSNK1D-203ENST00000392334 BAG4O95429 457 aaKnown RBP24.12■■□□□ 1.45
CSNK1D-203ENST00000392334 SLC27A3Q5K4L6 730 aa24.12■■□□□ 1.45
CSNK1D-203ENST00000392334 RC3H1Q5TC82 1133 aaKnown RBP24.12■■□□□ 1.45
CSNK1D-203ENST00000392334 CASC1Q6TDU7 716 aa24.12■■□□□ 1.45
CSNK1D-203ENST00000392334 COL15A1P39059 1388 aa24.12■■□□□ 1.45
CSNK1D-203ENST00000392334 CYP2E1P05181 493 aaPredicted RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms