RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 KCNQ2O43526 872 aa14.06□□□□□ -0.16
SMARCAL1-203ENST00000392128 RFX5P48382 616 aaPredicted RBP14.06□□□□□ -0.16
SMARCAL1-203ENST00000392128 HSP90AB3PQ58FF7 597 aa14.06□□□□□ -0.16
SMARCAL1-203ENST00000392128 CLASRPQ8N2M8 674 aaKnown RBP14.06□□□□□ -0.16
SMARCAL1-203ENST00000392128 MYH14Q7Z406 1995 aaKnown RBP14.06□□□□□ -0.16
SMARCAL1-203ENST00000392128 ERVV-1B6SEH8 477 aa14.06□□□□□ -0.16
SMARCAL1-203ENST00000392128 FOXO4P98177 505 aa14.06□□□□□ -0.16
SMARCAL1-203ENST00000392128 NUTM1Q86Y26 1132 aa14.06□□□□□ -0.16
SMARCAL1-203ENST00000392128 ANP32EQ9BTT0 268 aa14.06□□□□□ -0.16
SMARCAL1-203ENST00000392128 CCDC87Q9NVE4 849 aa14.06□□□□□ -0.16
SMARCAL1-203ENST00000392128 AK9Q5TCS8 1911 aa14.06□□□□□ -0.16
SMARCAL1-203ENST00000392128 RBM25P49756 843 aaKnown RBP14.05□□□□□ -0.16
SMARCAL1-203ENST00000392128 TSHZ3Q63HK5 1081 aa14.05□□□□□ -0.16
SMARCAL1-203ENST00000392128 INTS5Q6P9B9 1019 aaKnown RBP14.05□□□□□ -0.16
SMARCAL1-203ENST00000392128 CASC1Q6TDU7 716 aa14.05□□□□□ -0.16
SMARCAL1-203ENST00000392128 BTAF1O14981 1849 aa14.05□□□□□ -0.16
SMARCAL1-203ENST00000392128 TTC41PQ6P2S7 1318 aa14.05□□□□□ -0.16
SMARCAL1-203ENST00000392128 SASH1O94885 1247 aa14.05□□□□□ -0.16
SMARCAL1-203ENST00000392128 EIF5P55010 431 aaKnown RBP14.05□□□□□ -0.16
SMARCAL1-203ENST00000392128 ITPK1Q13572 414 aa14.05□□□□□ -0.16
SMARCAL1-203ENST00000392128 ONECUT3O60422 494 aaPredicted RBP14.04□□□□□ -0.16
SMARCAL1-203ENST00000392128 CRKLP46109 303 aaKnown RBP14.04□□□□□ -0.16
SMARCAL1-203ENST00000392128 PTPN12Q05209 780 aaKnown RBP14.04□□□□□ -0.16
SMARCAL1-203ENST00000392128 PI4K2BQ8TCG2 481 aa14.04□□□□□ -0.16
SMARCAL1-203ENST00000392128 TRPC5Q9UL62 973 aaPredicted RBP14.04□□□□□ -0.16
SMARCAL1-203ENST00000392128 SBF2Q86WG5 1849 aa14.04□□□□□ -0.16
SMARCAL1-203ENST00000392128 PCCAP05165 728 aaPredicted RBP14.04□□□□□ -0.16
SMARCAL1-203ENST00000392128 HLFQ16534 295 aa14.04□□□□□ -0.16
SMARCAL1-203ENST00000392128 LMBR1LQ6UX01 489 aa14.04□□□□□ -0.16
SMARCAL1-203ENST00000392128 DZIP3Q86Y13 1208 aaKnown RBP14.04□□□□□ -0.16
SMARCAL1-203ENST00000392128 ZBTB38Q8NAP3 1195 aaPredicted RBP14.03□□□□□ -0.16
SMARCAL1-203ENST00000392128 KLHDC4Q8TBB5 520 aa14.03□□□□□ -0.16
SMARCAL1-203ENST00000392128 ARXQ96QS3 562 aa14.03□□□□□ -0.16
SMARCAL1-203ENST00000392128 PLA2G12BQ9BX93 195 aa14.03□□□□□ -0.16
SMARCAL1-203ENST00000392128 SIL1Q9H173 461 aa14.02□□□□□ -0.16
SMARCAL1-203ENST00000392128 MYH3P11055 1940 aa14.02□□□□□ -0.17
SMARCAL1-203ENST00000392128 CDHR2Q9BYE9 1310 aa14.02□□□□□ -0.17
SMARCAL1-203ENST00000392128 IFIT2P09913 472 aaKnown RBP14.02□□□□□ -0.17
SMARCAL1-203ENST00000392128 NLRP10Q86W26 655 aa14.02□□□□□ -0.17
SMARCAL1-203ENST00000392128 GPATCH3Q96I76 525 aa14.02□□□□□ -0.17
SMARCAL1-203ENST00000392128 BCORQ6W2J9 1755 aa14.02□□□□□ -0.17
SMARCAL1-203ENST00000392128 ERC2O15083 957 aa14.01□□□□□ -0.17
SMARCAL1-203ENST00000392128 GLRX3O76003 335 aaKnown RBP14.01□□□□□ -0.17
SMARCAL1-203ENST00000392128 RTL5Q5HYW3 569 aaPredicted RBP14.01□□□□□ -0.17
SMARCAL1-203ENST00000392128 AACSQ86V21 672 aa14.01□□□□□ -0.17
SMARCAL1-203ENST00000392128 TBC1D2BQ9UPU7 963 aa14.01□□□□□ -0.17
SMARCAL1-203ENST00000392128 TRIM6-TRIM34B2RNG4 842 aa14.01□□□□□ -0.17
SMARCAL1-203ENST00000392128 ECHDC1Q9NTX5 307 aa14.01□□□□□ -0.17
SMARCAL1-203ENST00000392128 LY75O60449 1722 aa14.01□□□□□ -0.17
SMARCAL1-203ENST00000392128 BECN1Q14457 450 aa14□□□□□ -0.17
SMARCAL1-203ENST00000392128 ZNF34Q8IZ26 560 aa14□□□□□ -0.17
SMARCAL1-203ENST00000392128 EAF2Q96CJ1 260 aaPredicted RBP14□□□□□ -0.17
SMARCAL1-203ENST00000392128 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14□□□□□ -0.17
SMARCAL1-203ENST00000392128 RILPL2Q969X0 211 aa14□□□□□ -0.17
SMARCAL1-203ENST00000392128 CHMP3Q9Y3E7 222 aa14□□□□□ -0.17
SMARCAL1-203ENST00000392128 GPTP24298 496 aa13.99□□□□□ -0.17
SMARCAL1-203ENST00000392128 FAM89AQ96GI7 184 aa13.99□□□□□ -0.17
SMARCAL1-203ENST00000392128 CNTNAP4Q9C0A0 1308 aa13.99□□□□□ -0.17
SMARCAL1-203ENST00000392128 REC8O95072 547 aa13.99□□□□□ -0.17
SMARCAL1-203ENST00000392128 CHMLP26374 656 aa13.99□□□□□ -0.17
SMARCAL1-203ENST00000392128 CNTROBQ8N137 903 aa13.99□□□□□ -0.17
SMARCAL1-203ENST00000392128 LINC00116Q8NCU8 138 aa13.99□□□□□ -0.17
SMARCAL1-203ENST00000392128 CAMTA2O94983 1202 aa13.98□□□□□ -0.17
SMARCAL1-203ENST00000392128 CSF1RP07333 972 aa13.98□□□□□ -0.17
SMARCAL1-203ENST00000392128 PTF1AQ7RTS3 328 aa13.98□□□□□ -0.17
SMARCAL1-203ENST00000392128 SEPT12Q8IYM1 358 aa13.98□□□□□ -0.17
SMARCAL1-203ENST00000392128 USP26Q9BXU7 913 aa13.98□□□□□ -0.17
SMARCAL1-203ENST00000392128 TAF1LQ8IZX4 1826 aa13.98□□□□□ -0.17
SMARCAL1-203ENST00000392128 CIAO1O76071 339 aa13.98□□□□□ -0.17
SMARCAL1-203ENST00000392128 TFCP2Q12800 502 aa13.98□□□□□ -0.17
SMARCAL1-203ENST00000392128 FBXO3Q9UK99 471 aa13.98□□□□□ -0.17
SMARCAL1-203ENST00000392128 UBN2Q6ZU65 1347 aa13.97□□□□□ -0.17
SMARCAL1-203ENST00000392128 IL15P40933 162 aaPredicted RBP13.97□□□□□ -0.17
SMARCAL1-203ENST00000392128 TNNI3KQ59H18 835 aa13.97□□□□□ -0.17
SMARCAL1-203ENST00000392128 ATG9AQ7Z3C6 839 aa13.97□□□□□ -0.17
SMARCAL1-203ENST00000392128 ESYT1Q9BSJ8 1104 aa13.97□□□□□ -0.17
SMARCAL1-203ENST00000392128 CCDC8Q9H0W5 538 aaPredicted RBP13.97□□□□□ -0.17
SMARCAL1-203ENST00000392128 QTRT2Q9H974 415 aaKnown RBP13.97□□□□□ -0.17
SMARCAL1-203ENST00000392128 FPGT-TNNI3KV9GXZ4 949 aa13.97□□□□□ -0.17
SMARCAL1-203ENST00000392128 SLC4A3P48751 1232 aa13.96□□□□□ -0.17
SMARCAL1-203ENST00000392128 KIF2CQ99661 725 aa13.96□□□□□ -0.17
SMARCAL1-203ENST00000392128 TRMT112Q9UI30 125 aaKnown RBP13.96□□□□□ -0.17
SMARCAL1-203ENST00000392128 SCN7AQ01118 1682 aa13.96□□□□□ -0.17
SMARCAL1-203ENST00000392128 EYA2O00167 538 aa13.96□□□□□ -0.17
SMARCAL1-203ENST00000392128 CCDC57Q2TAC2 916 aa13.96□□□□□ -0.17
SMARCAL1-203ENST00000392128 RC3H1Q5TC82 1133 aaKnown RBP13.96□□□□□ -0.17
SMARCAL1-203ENST00000392128 GPR108Q9NPR9 543 aa13.96□□□□□ -0.17
SMARCAL1-203ENST00000392128 TLR7Q9NYK1 1049 aaKnown RBP13.96□□□□□ -0.17
SMARCAL1-203ENST00000392128 LAMB2P55268 1798 aa13.96□□□□□ -0.17
SMARCAL1-203ENST00000392128 RGL2O15211 777 aa13.95□□□□□ -0.18
SMARCAL1-203ENST00000392128 PARP10Q53GL7 1025 aa13.95□□□□□ -0.18
SMARCAL1-203ENST00000392128 FAM182BQ5T319 152 aa13.95□□□□□ -0.18
SMARCAL1-203ENST00000392128 AK7Q96M32 723 aa13.95□□□□□ -0.18
SMARCAL1-203ENST00000392128 IRS4O14654 1257 aaPredicted RBP13.95□□□□□ -0.18
SMARCAL1-203ENST00000392128 MAP4K4O95819 1239 aaPredicted RBP13.95□□□□□ -0.18
SMARCAL1-203ENST00000392128 TBC1D2Q9BYX2 928 aa13.95□□□□□ -0.18
SMARCAL1-203ENST00000392128 BRWD3Q6RI45 1802 aa13.95□□□□□ -0.18
SMARCAL1-203ENST00000392128 CTSWP56202 376 aa13.94□□□□□ -0.18
SMARCAL1-203ENST00000392128 CLEC4GQ6UXB4 293 aa13.94□□□□□ -0.18
SMARCAL1-203ENST00000392128 SYNE4Q8N205 404 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms