RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 CCDC191Q8NCU4 936 aa21.48■■□□□ 1.03
ERCC2-202ENST00000391942 MEIS3Q99687 375 aa21.48■■□□□ 1.03
ERCC2-202ENST00000391942 C9orf78Q9NZ63 289 aaPredicted RBP21.48■■□□□ 1.03
ERCC2-202ENST00000391942 NFIXQ14938 502 aa21.47■■□□□ 1.03
ERCC2-202ENST00000391942 SETDB2Q96T68 719 aa21.47■■□□□ 1.03
ERCC2-202ENST00000391942 ZBTB7BO15156 539 aaPredicted RBP21.46■■□□□ 1.03
ERCC2-202ENST00000391942 TRIM28Q13263 835 aaKnown RBP21.46■■□□□ 1.03
ERCC2-202ENST00000391942 SUSD4Q5VX71 490 aa21.46■■□□□ 1.03
ERCC2-202ENST00000391942 USP44Q9H0E7 712 aa21.46■■□□□ 1.03
ERCC2-202ENST00000391942 NBPF7P0C2Y1 421 aaPredicted RBP21.45■■□□□ 1.03
ERCC2-202ENST00000391942 GRM8O00222 908 aa21.45■■□□□ 1.02
ERCC2-202ENST00000391942 PARP10Q53GL7 1025 aa21.45■■□□□ 1.02
ERCC2-202ENST00000391942 UBE3BQ7Z3V4 1068 aa21.45■■□□□ 1.02
ERCC2-202ENST00000391942 NLGN1Q8N2Q7 840 aa21.45■■□□□ 1.02
ERCC2-202ENST00000391942 TRMT112Q9UI30 125 aaKnown RBP21.45■■□□□ 1.02
ERCC2-202ENST00000391942 FAM89AQ96GI7 184 aa21.44■■□□□ 1.02
ERCC2-202ENST00000391942 C1orf115Q9H7X2 142 aa21.44■■□□□ 1.02
ERCC2-202ENST00000391942 COL24A1Q17RW2 1714 aa21.44■■□□□ 1.02
ERCC2-202ENST00000391942 UBTFL1P0CB47 393 aaPredicted RBP21.43■■□□□ 1.02
ERCC2-202ENST00000391942 PPP1R42Q7Z4L9 355 aa21.43■■□□□ 1.02
ERCC2-202ENST00000391942 SYNE4Q8N205 404 aa21.43■■□□□ 1.02
ERCC2-202ENST00000391942 UTP14AQ9BVJ6 771 aaKnown RBP21.43■■□□□ 1.02
ERCC2-202ENST00000391942 CASZ1Q86V15 1759 aa21.43■■□□□ 1.02
ERCC2-202ENST00000391942 CARMIL3Q8ND23 1372 aa21.43■■□□□ 1.02
ERCC2-202ENST00000391942 GNAI3P08754 354 aa21.42■■□□□ 1.02
ERCC2-202ENST00000391942 TM4SF1P30408 202 aa21.42■■□□□ 1.02
ERCC2-202ENST00000391942 DDR1Q08345 913 aa21.42■■□□□ 1.02
ERCC2-202ENST00000391942 NBPF5PQ86XG9 351 aaPredicted RBP21.42■■□□□ 1.02
ERCC2-202ENST00000391942 NUTM1Q86Y26 1132 aa21.42■■□□□ 1.02
ERCC2-202ENST00000391942 H7C1W4 665 aa21.41■■□□□ 1.02
ERCC2-202ENST00000391942 SOCS7O14512 581 aa21.41■■□□□ 1.02
ERCC2-202ENST00000391942 ZBTB7AO95365 584 aa21.41■■□□□ 1.02
ERCC2-202ENST00000391942 NTSR2O95665 410 aa21.41■■□□□ 1.02
ERCC2-202ENST00000391942 MMP10P09238 476 aa21.41■■□□□ 1.02
ERCC2-202ENST00000391942 ZBTB38Q8NAP3 1195 aaPredicted RBP21.41■■□□□ 1.02
ERCC2-202ENST00000391942 ZBTB40Q9NUA8 1239 aa21.41■■□□□ 1.02
ERCC2-202ENST00000391942 PCCAP05165 728 aaPredicted RBP21.4■■□□□ 1.02
ERCC2-202ENST00000391942 CCDC24Q8N4L8 307 aa21.4■■□□□ 1.02
ERCC2-202ENST00000391942 CHMP4BQ9H444 224 aaKnown RBP21.4■■□□□ 1.02
ERCC2-202ENST00000391942 UTYO14607 1347 aa21.4■■□□□ 1.02
ERCC2-202ENST00000391942 POLRMTO00411 1230 aaKnown RBP21.39■■□□□ 1.02
ERCC2-202ENST00000391942 NPHP1O15259 732 aa21.39■■□□□ 1.02
ERCC2-202ENST00000391942 GTF2E1P29083 439 aaPredicted RBP21.39■■□□□ 1.02
ERCC2-202ENST00000391942 CASP7P55210 303 aa21.39■■□□□ 1.02
ERCC2-202ENST00000391942 SLC16A10Q8TF71 515 aa21.39■■□□□ 1.02
ERCC2-202ENST00000391942 SUCLG2Q96I99 432 aa21.39■■□□□ 1.02
ERCC2-202ENST00000391942 LRRFIP2Q9Y608 721 aaKnown RBP21.39■■□□□ 1.02
ERCC2-202ENST00000391942 IBTKQ9P2D0 1353 aaPredicted RBP21.39■■□□□ 1.02
ERCC2-202ENST00000391942 SERPINB2P05120 415 aa21.39■■□□□ 1.01
ERCC2-202ENST00000391942 ERFEQ4G0M1 354 aa21.39■■□□□ 1.01
ERCC2-202ENST00000391942 NYXQ9GZU5 481 aa21.39■■□□□ 1.01
ERCC2-202ENST00000391942 SH3TC1Q8TE82 1336 aa21.39■■□□□ 1.01
ERCC2-202ENST00000391942 GNAI2P04899 355 aa21.38■■□□□ 1.01
ERCC2-202ENST00000391942 TPTE2Q6XPS3 522 aa21.38■■□□□ 1.01
ERCC2-202ENST00000391942 ATF5Q9Y2D1 282 aaPredicted RBP21.38■■□□□ 1.01
ERCC2-202ENST00000391942 PARP3Q9Y6F1 533 aa21.38■■□□□ 1.01
ERCC2-202ENST00000391942 IRS4O14654 1257 aaPredicted RBP21.37■■□□□ 1.01
ERCC2-202ENST00000391942 HCLS1P14317 486 aaPredicted RBP21.37■■□□□ 1.01
ERCC2-202ENST00000391942 CNBD1Q8NA66 436 aa21.37■■□□□ 1.01
ERCC2-202ENST00000391942 EPHA10Q5JZY3 1008 aa21.36■■□□□ 1.01
ERCC2-202ENST00000391942 KAZALD1Q96I82 304 aa21.36■■□□□ 1.01
ERCC2-202ENST00000391942 ABCC12Q96J65 1359 aa21.35■■□□□ 1.01
ERCC2-202ENST00000391942 CDHR2Q9BYE9 1310 aa21.35■■□□□ 1.01
ERCC2-202ENST00000391942 PRR5LQ6MZQ0 368 aa21.35■■□□□ 1.01
ERCC2-202ENST00000391942 BICC1Q9H694 974 aaKnown RBP21.35■■□□□ 1.01
ERCC2-202ENST00000391942 DDX60Q8IY21 1712 aaKnown RBP21.35■■□□□ 1.01
ERCC2-202ENST00000391942 MTFR1LQ9H019 292 aa21.34■■□□□ 1.01
ERCC2-202ENST00000391942 PCDHB15Q9Y5E8 787 aa21.33■■□□□ 1.01
ERCC2-202ENST00000391942 GTF3C3Q9Y5Q9 886 aa21.33■■□□□ 1.01
ERCC2-202ENST00000391942 FOXO4P98177 505 aa21.32■■□□□ 1
ERCC2-202ENST00000391942 HDAC5Q9UQL6 1122 aa21.32■■□□□ 1
ERCC2-202ENST00000391942 LAMB2P55268 1798 aa21.32■■□□□ 1
ERCC2-202ENST00000391942 NRXN2Q9P2S2 1712 aa21.32■■□□□ 1
ERCC2-202ENST00000391942 ST5P78524 1137 aa21.32■■□□□ 1
ERCC2-202ENST00000391942 AAMPQ13685 434 aa21.32■■□□□ 1
ERCC2-202ENST00000391942 ANKRD44Q8N8A2 993 aa21.32■■□□□ 1
ERCC2-202ENST00000391942 CCDC85AQ96PX6 553 aaPredicted RBP21.32■■□□□ 1
ERCC2-202ENST00000391942 PDE8AO60658 829 aa21.31■■□□□ 1
ERCC2-202ENST00000391942 CEP85Q6P2H3 762 aa21.31■■□□□ 1
ERCC2-202ENST00000391942 C3orf67Q6ZVT6 689 aa21.31■■□□□ 1
ERCC2-202ENST00000391942 CHMP3Q9Y3E7 222 aa21.31■■□□□ 1
ERCC2-202ENST00000391942 TNRC6CQ9HCJ0 1690 aaKnown RBP21.31■■□□□ 1
ERCC2-202ENST00000391942 LMBR1LQ6UX01 489 aa21.3■■□□□ 1
ERCC2-202ENST00000391942 PLA2G12BQ9BX93 195 aa21.3■■□□□ 1
ERCC2-202ENST00000391942 MYH3P11055 1940 aa21.3■■□□□ 1
ERCC2-202ENST00000391942 POLD1P28340 1107 aa21.29■■□□□ 1
ERCC2-202ENST00000391942 CTSWP56202 376 aa21.29■■□□□ 1
ERCC2-202ENST00000391942 SLC10A5Q5PT55 438 aa21.29■■□□□ 1
ERCC2-202ENST00000391942 PNMA6EA0A0J9YXQ4 647 aa21.28■■□□□ 1
ERCC2-202ENST00000391942 ERICH6BQ5W0A0 696 aa21.28■■□□□ 1
ERCC2-202ENST00000391942 HSP90B1P14625 803 aaKnown RBP21.27■■□□□ 1
ERCC2-202ENST00000391942 ATP8B2P98198 1209 aa21.27■■□□□ 1
ERCC2-202ENST00000391942 SIRT2Q8IXJ6 389 aa21.27■■□□□ 1
ERCC2-202ENST00000391942 ANKRD31Q8N7Z5 1873 aa21.27■□□□□ 0.99
ERCC2-202ENST00000391942 SRGAP3O43295 1099 aa21.26■□□□□ 0.99
ERCC2-202ENST00000391942 RABL6Q3YEC7 729 aaPredicted RBP21.26■□□□□ 0.99
ERCC2-202ENST00000391942 RPAP2Q8IXW5 612 aaPredicted RBP21.26■□□□□ 0.99
ERCC2-202ENST00000391942 TTLL11Q8NHH1 800 aa21.26■□□□□ 0.99
ERCC2-202ENST00000391942 NLRP3Q96P20 1036 aa21.26■□□□□ 0.99
ERCC2-202ENST00000391942 FAM161AQ3B820 660 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms