RNA–Protein interactions for RNA: ENST00000390367.3

TRBV11-1-201, Transcript of T cell receptor beta variable 11-1, humanhuman

APPRIS P1 BASIC

Gene TRBV11-1, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1-201ENST00000390367 GPTP24298 496 aa12.17□□□□□ -0.46
TRBV11-1-201ENST00000390367 SF3B2Q13435 895 aaKnown RBP12.17□□□□□ -0.46
TRBV11-1-201ENST00000390367 HLFQ16534 295 aa12.17□□□□□ -0.46
TRBV11-1-201ENST00000390367 FAM161AQ3B820 660 aa12.17□□□□□ -0.46
TRBV11-1-201ENST00000390367 RABL6Q3YEC7 729 aaPredicted RBP12.17□□□□□ -0.46
TRBV11-1-201ENST00000390367 ZNF34Q8IZ26 560 aa12.17□□□□□ -0.46
TRBV11-1-201ENST00000390367 UTP14AQ9BVJ6 771 aaKnown RBP12.17□□□□□ -0.46
TRBV11-1-201ENST00000390367 NARFQ9UHQ1 456 aa12.17□□□□□ -0.46
TRBV11-1-201ENST00000390367 EXOC6BQ9Y2D4 811 aa12.17□□□□□ -0.46
TRBV11-1-201ENST00000390367 APBB1O00213 710 aa12.16□□□□□ -0.46
TRBV11-1-201ENST00000390367 CAMTA2O94983 1202 aa12.16□□□□□ -0.46
TRBV11-1-201ENST00000390367 GTF2E1P29083 439 aaPredicted RBP12.16□□□□□ -0.46
TRBV11-1-201ENST00000390367 CCDC57Q2TAC2 916 aa12.16□□□□□ -0.46
TRBV11-1-201ENST00000390367 PTF1AQ7RTS3 328 aa12.16□□□□□ -0.46
TRBV11-1-201ENST00000390367 CLASRPQ8N2M8 674 aaKnown RBP12.16□□□□□ -0.46
TRBV11-1-201ENST00000390367 FLAD1Q8NFF5 587 aa12.16□□□□□ -0.46
TRBV11-1-201ENST00000390367 GPATCH3Q96I76 525 aa12.16□□□□□ -0.46
TRBV11-1-201ENST00000390367 PLA2G12BQ9BX93 195 aa12.16□□□□□ -0.46
TRBV11-1-201ENST00000390367 NYXQ9GZU5 481 aa12.16□□□□□ -0.46
TRBV11-1-201ENST00000390367 NIP7Q9Y221 180 aaKnown RBP eCLIP12.16□□□□□ -0.46
TRBV11-1-201ENST00000390367 SH3TC1Q8TE82 1336 aa12.15□□□□□ -0.46
TRBV11-1-201ENST00000390367 CASP7P55210 303 aa12.15□□□□□ -0.46
TRBV11-1-201ENST00000390367 TXNRD1Q16881 649 aa12.15□□□□□ -0.46
TRBV11-1-201ENST00000390367 TAF7LQ5H9L4 462 aa12.15□□□□□ -0.46
TRBV11-1-201ENST00000390367 POTEAQ6S8J7 498 aa12.15□□□□□ -0.46
TRBV11-1-201ENST00000390367 LMBR1LQ6UX01 489 aa12.15□□□□□ -0.46
TRBV11-1-201ENST00000390367 COPRSQ9NQ92 184 aa12.15□□□□□ -0.46
TRBV11-1-201ENST00000390367 FBXO3Q9UK99 471 aa12.15□□□□□ -0.46
TRBV11-1-201ENST00000390367 SBF2Q86WG5 1849 aa12.15□□□□□ -0.46
TRBV11-1-201ENST00000390367 AFDNP55196 1824 aaKnown RBP12.14□□□□□ -0.47
TRBV11-1-201ENST00000390367 IRS4O14654 1257 aaPredicted RBP12.14□□□□□ -0.47
TRBV11-1-201ENST00000390367 PDE8AO60658 829 aa12.14□□□□□ -0.47
TRBV11-1-201ENST00000390367 PDE4AP27815 886 aa12.14□□□□□ -0.47
TRBV11-1-201ENST00000390367 SSFA2P28290 1259 aa12.14□□□□□ -0.47
TRBV11-1-201ENST00000390367 RHPN1Q8TCX5 695 aa12.14□□□□□ -0.47
TRBV11-1-201ENST00000390367 SETDB2Q96T68 719 aa12.14□□□□□ -0.47
TRBV11-1-201ENST00000390367 UPF2Q9HAU5 1272 aaKnown RBP12.14□□□□□ -0.47
TRBV11-1-201ENST00000390367 NUP188Q5SRE5 1749 aa12.14□□□□□ -0.47
TRBV11-1-201ENST00000390367 RREB1Q92766 1687 aa12.13□□□□□ -0.47
TRBV11-1-201ENST00000390367 NPHP1O15259 732 aa12.13□□□□□ -0.47
TRBV11-1-201ENST00000390367 IFIT2P09913 472 aaKnown RBP12.13□□□□□ -0.47
TRBV11-1-201ENST00000390367 KCNQ4P56696 695 aa12.13□□□□□ -0.47
TRBV11-1-201ENST00000390367 IFIT5Q13325 482 aaKnown RBP12.13□□□□□ -0.47
TRBV11-1-201ENST00000390367 RTL5Q5HYW3 569 aaPredicted RBP12.13□□□□□ -0.47
TRBV11-1-201ENST00000390367 CASC1Q6TDU7 716 aa12.13□□□□□ -0.47
TRBV11-1-201ENST00000390367 TPTE2Q6XPS3 522 aa12.13□□□□□ -0.47
TRBV11-1-201ENST00000390367 FAM89AQ96GI7 184 aa12.13□□□□□ -0.47
TRBV11-1-201ENST00000390367 KAZALD1Q96I82 304 aa12.13□□□□□ -0.47
TRBV11-1-201ENST00000390367 BCL11AQ9H165 835 aa12.13□□□□□ -0.47
TRBV11-1-201ENST00000390367 RGS17Q9UGC6 210 aaPredicted RBP12.13□□□□□ -0.47
TRBV11-1-201ENST00000390367 BRWD3Q6RI45 1802 aa12.13□□□□□ -0.47
TRBV11-1-201ENST00000390367 LY75O60449 1722 aa12.12□□□□□ -0.47
TRBV11-1-201ENST00000390367 COL5A3P25940 1745 aaPredicted RBP12.12□□□□□ -0.47
TRBV11-1-201ENST00000390367 ANKRD18BA2A2Z9 1011 aa12.12□□□□□ -0.47
TRBV11-1-201ENST00000390367 ERC2O15083 957 aa12.12□□□□□ -0.47
TRBV11-1-201ENST00000390367 IL15P40933 162 aaPredicted RBP12.12□□□□□ -0.47
TRBV11-1-201ENST00000390367 FOXO4P98177 505 aa12.12□□□□□ -0.47
TRBV11-1-201ENST00000390367 BMP2KLQ5H9B9 411 aa12.12□□□□□ -0.47
TRBV11-1-201ENST00000390367 JARID2Q92833 1246 aaPredicted RBP12.12□□□□□ -0.47
TRBV11-1-201ENST00000390367 ARHGEF1Q92888 912 aaKnown RBP12.12□□□□□ -0.47
TRBV11-1-201ENST00000390367 BACH2Q9BYV9 841 aa12.12□□□□□ -0.47
TRBV11-1-201ENST00000390367 SMARCA5O60264 1052 aaPredicted RBP12.11□□□□□ -0.47
TRBV11-1-201ENST00000390367 CSF1RP07333 972 aa12.11□□□□□ -0.47
TRBV11-1-201ENST00000390367 CCDC152Q4G0S7 254 aa12.11□□□□□ -0.47
TRBV11-1-201ENST00000390367 EPHA10Q5JZY3 1008 aa12.11□□□□□ -0.47
TRBV11-1-201ENST00000390367 SUSD4Q5VX71 490 aa12.11□□□□□ -0.47
TRBV11-1-201ENST00000390367 USPL1Q5W0Q7 1092 aa12.11□□□□□ -0.47
TRBV11-1-201ENST00000390367 PLEKHM2Q8IWE5 1019 aa12.11□□□□□ -0.47
TRBV11-1-201ENST00000390367 OSBPL3Q9H4L5 887 aa12.11□□□□□ -0.47
TRBV11-1-201ENST00000390367 TFCP2L1Q9NZI6 479 aa12.11□□□□□ -0.47
TRBV11-1-201ENST00000390367 AOX1Q06278 1338 aa12.11□□□□□ -0.47
TRBV11-1-201ENST00000390367 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.1□□□□□ -0.47
TRBV11-1-201ENST00000390367 FAM177BA6PVY3 158 aa12.1□□□□□ -0.47
TRBV11-1-201ENST00000390367 CIAO1O76071 339 aa12.1□□□□□ -0.47
TRBV11-1-201ENST00000390367 PHF14O94880 888 aa12.1□□□□□ -0.47
TRBV11-1-201ENST00000390367 MX1P20591 662 aa12.1□□□□□ -0.47
TRBV11-1-201ENST00000390367 BAG6P46379 1132 aa12.1□□□□□ -0.47
TRBV11-1-201ENST00000390367 CTSWP56202 376 aa12.1□□□□□ -0.47
TRBV11-1-201ENST00000390367 PTPN12Q05209 780 aaKnown RBP12.1□□□□□ -0.47
TRBV11-1-201ENST00000390367 SKAP1Q86WV1 359 aa12.1□□□□□ -0.47
TRBV11-1-201ENST00000390367 NBPF5PQ86XG9 351 aaPredicted RBP12.1□□□□□ -0.47
TRBV11-1-201ENST00000390367 SIL1Q9H173 461 aa12.1□□□□□ -0.47
TRBV11-1-201ENST00000390367 IL1RAPL2Q9NP60 686 aa12.1□□□□□ -0.47
TRBV11-1-201ENST00000390367 TSHZ2Q9NRE2 1034 aa12.1□□□□□ -0.47
TRBV11-1-201ENST00000390367 LRRC4BQ9NT99 713 aa12.1□□□□□ -0.47
TRBV11-1-201ENST00000390367 AKAP2Q9Y2D5 859 aa12.1□□□□□ -0.47
TRBV11-1-201ENST00000390367 TTC41PQ6P2S7 1318 aa12.1□□□□□ -0.47
TRBV11-1-201ENST00000390367 USP42Q9H9J4 1324 aaKnown RBP12.1□□□□□ -0.47
TRBV11-1-201ENST00000390367 EYA2O00167 538 aa12.09□□□□□ -0.47
TRBV11-1-201ENST00000390367 RFX5P48382 616 aaPredicted RBP12.09□□□□□ -0.47
TRBV11-1-201ENST00000390367 PDE1AP54750 535 aa12.09□□□□□ -0.47
TRBV11-1-201ENST00000390367 TTC22Q5TAA0 569 aa12.09□□□□□ -0.47
TRBV11-1-201ENST00000390367 BICDL1Q6ZP65 573 aa12.09□□□□□ -0.47
TRBV11-1-201ENST00000390367 CCDC125Q86Z20 511 aa12.09□□□□□ -0.47
TRBV11-1-201ENST00000390367 CEP126Q9P2H0 1117 aa12.09□□□□□ -0.47
TRBV11-1-201ENST00000390367 PA2G4Q9UQ80 394 aaKnown RBP12.09□□□□□ -0.47
TRBV11-1-201ENST00000390367 NUP98P52948 1817 aa12.09□□□□□ -0.47
TRBV11-1-201ENST00000390367 UBN2Q6ZU65 1347 aa12.09□□□□□ -0.47
TRBV11-1-201ENST00000390367 MYH14Q7Z406 1995 aaKnown RBP12.09□□□□□ -0.47
TRBV11-1-201ENST00000390367 C4BP0C0L5 1744 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms