RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 RHPN1Q8TCX5 695 aa15.16■□□□□ 0.02
PTPRN2-203ENST00000389418 SCAND2PQ9GZW5 306 aaPredicted RBP15.16■□□□□ 0.02
PTPRN2-203ENST00000389418 NUCB1Q02818 461 aa15.16■□□□□ 0.02
PTPRN2-203ENST00000389418 CCDC152Q4G0S7 254 aa15.16■□□□□ 0.02
PTPRN2-203ENST00000389418 ZNF444Q8N0Y2 327 aaPredicted RBP15.16■□□□□ 0.02
PTPRN2-203ENST00000389418 TBC1D32Q96NH3 1257 aa15.16■□□□□ 0.02
PTPRN2-203ENST00000389418 VAMP4O75379 141 aa15.15■□□□□ 0.02
PTPRN2-203ENST00000389418 TTC22Q5TAA0 569 aa15.15■□□□□ 0.02
PTPRN2-203ENST00000389418 BAG3O95817 575 aa15.15■□□□□ 0.02
PTPRN2-203ENST00000389418 A1BGP04217 495 aa15.15■□□□□ 0.02
PTPRN2-203ENST00000389418 SSFA2P28290 1259 aa15.15■□□□□ 0.02
PTPRN2-203ENST00000389418 MAST1Q9Y2H9 1570 aa15.15■□□□□ 0.02
PTPRN2-203ENST00000389418 GRM8O00222 908 aa15.15■□□□□ 0.02
PTPRN2-203ENST00000389418 PRIM1P49642 420 aaKnown RBP15.15■□□□□ 0.02
PTPRN2-203ENST00000389418 HMG20BQ9P0W2 317 aa15.15■□□□□ 0.02
PTPRN2-203ENST00000389418 SAMD9LQ8IVG5 1584 aa15.15■□□□□ 0.02
PTPRN2-203ENST00000389418 GNPATO15228 680 aa15.15■□□□□ 0.02
PTPRN2-203ENST00000389418 ZFYP08048 801 aaPredicted RBP15.15■□□□□ 0.02
PTPRN2-203ENST00000389418 VSIG10Q8N0Z9 540 aa15.15■□□□□ 0.02
PTPRN2-203ENST00000389418 ABCC1P33527 1531 aa15.14■□□□□ 0.02
PTPRN2-203ENST00000389418 SERPINC1P01008 464 aa15.14■□□□□ 0.01
PTPRN2-203ENST00000389418 CCDC96Q2M329 555 aa15.14■□□□□ 0.01
PTPRN2-203ENST00000389418 NUP62CLQ9H1M0 184 aa15.14■□□□□ 0.01
PTPRN2-203ENST00000389418 CFAP74Q9C0B2 1584 aa15.14■□□□□ 0.01
PTPRN2-203ENST00000389418 ZNF76P36508 570 aa15.14■□□□□ 0.01
PTPRN2-203ENST00000389418 RBM26Q5T8P6 1007 aaKnown RBP15.14■□□□□ 0.01
PTPRN2-203ENST00000389418 KSR2Q6VAB6 950 aa15.14■□□□□ 0.01
PTPRN2-203ENST00000389418 ANKRD44Q8N8A2 993 aa15.14■□□□□ 0.01
PTPRN2-203ENST00000389418 CDCA7Q9BWT1 371 aaPredicted RBP15.14■□□□□ 0.01
PTPRN2-203ENST00000389418 MICU3Q86XE3 530 aa15.14■□□□□ 0.01
PTPRN2-203ENST00000389418 IP6K1Q92551 441 aa15.14■□□□□ 0.01
PTPRN2-203ENST00000389418 RUFY1Q96T51 708 aa15.14■□□□□ 0.01
PTPRN2-203ENST00000389418 BABAM1Q9NWV8 329 aa15.14■□□□□ 0.01
PTPRN2-203ENST00000389418 NPC1L1Q9UHC9 1359 aa15.14■□□□□ 0.01
PTPRN2-203ENST00000389418 LIMCH1Q9UPQ0 1083 aa15.14■□□□□ 0.01
PTPRN2-203ENST00000389418 SYCE3A1L190 88 aa15.14■□□□□ 0.01
PTPRN2-203ENST00000389418 DTNBO60941 627 aa15.14■□□□□ 0.01
PTPRN2-203ENST00000389418 PPFIBP1Q86W92 1011 aa15.14■□□□□ 0.01
PTPRN2-203ENST00000389418 HCLS1P14317 486 aaPredicted RBP15.13■□□□□ 0.01
PTPRN2-203ENST00000389418 TNIP1Q15025 636 aa15.13■□□□□ 0.01
PTPRN2-203ENST00000389418 CAMK4Q16566 473 aa15.13■□□□□ 0.01
PTPRN2-203ENST00000389418 TEX35Q5T0J7 233 aa15.13■□□□□ 0.01
PTPRN2-203ENST00000389418 DCAF5Q96JK2 942 aa15.13■□□□□ 0.01
PTPRN2-203ENST00000389418 NLRP3Q96P20 1036 aa15.13■□□□□ 0.01
PTPRN2-203ENST00000389418 IFIT3O14879 490 aaKnown RBP15.13■□□□□ 0.01
PTPRN2-203ENST00000389418 RIMBP2O15034 1052 aa15.13■□□□□ 0.01
PTPRN2-203ENST00000389418 SDSP20132 328 aa15.13■□□□□ 0.01
PTPRN2-203ENST00000389418 RAB34Q9BZG1 259 aa15.13■□□□□ 0.01
PTPRN2-203ENST00000389418 ERCC4Q92889 916 aaPredicted RBP15.13■□□□□ 0.01
PTPRN2-203ENST00000389418 STX8Q9UNK0 236 aa15.13■□□□□ 0.01
PTPRN2-203ENST00000389418 COL17A1Q9UMD9 1497 aaPredicted RBP15.13■□□□□ 0.01
PTPRN2-203ENST00000389418 SMTNL1A8MU46 457 aa15.12■□□□□ 0.01
PTPRN2-203ENST00000389418 ST5P78524 1137 aa15.12■□□□□ 0.01
PTPRN2-203ENST00000389418 TNPO1Q92973 898 aaKnown RBP15.12■□□□□ 0.01
PTPRN2-203ENST00000389418 ATP2B3Q16720 1220 aa15.12■□□□□ 0.01
PTPRN2-203ENST00000389418 LINS1Q8NG48 757 aa15.12■□□□□ 0.01
PTPRN2-203ENST00000389418 PANK2Q9BZ23 570 aa15.12■□□□□ 0.01
PTPRN2-203ENST00000389418 TFIP11Q9UBB9 837 aaKnown RBP15.12■□□□□ 0.01
PTPRN2-203ENST00000389418 SLC12A7Q9Y666 1083 aa15.12■□□□□ 0.01
PTPRN2-203ENST00000389418 MLH3Q9UHC1 1453 aa15.11■□□□□ 0.01
PTPRN2-203ENST00000389418 GSTO1P78417 241 aa15.11■□□□□ 0.01
PTPRN2-203ENST00000389418 ZGPATQ8N5A5 531 aaKnown RBP15.11■□□□□ 0.01
PTPRN2-203ENST00000389418 PPP4R3BQ5MIZ7 849 aa15.11■□□□□ 0.01
PTPRN2-203ENST00000389418 ANKRD18AQ8IVF6 992 aa15.11■□□□□ 0.01
PTPRN2-203ENST00000389418 PDE1AP54750 535 aa15.11■□□□□ 0.01
PTPRN2-203ENST00000389418 RNMTO43148 476 aaKnown RBP15.11■□□□□ 0.01
PTPRN2-203ENST00000389418 HSP90B2PQ58FF3 399 aa15.11■□□□□ 0.01
PTPRN2-203ENST00000389418 CCDC12Q8WUD4 166 aaPredicted RBP15.11■□□□□ 0.01
PTPRN2-203ENST00000389418 C8orf76Q96K31 380 aa15.11■□□□□ 0.01
PTPRN2-203ENST00000389418 RTCBQ9Y3I0 505 aaKnown RBP15.11■□□□□ 0.01
PTPRN2-203ENST00000389418 IL15P40933 162 aaPredicted RBP15.1■□□□□ 0.01
PTPRN2-203ENST00000389418 TNNT3P45378 269 aaPredicted RBP15.1■□□□□ 0.01
PTPRN2-203ENST00000389418 PICALMQ13492 652 aa15.1■□□□□ 0.01
PTPRN2-203ENST00000389418 GOLGA8BA8MQT2 603 aa15.1■□□□□ 0.01
PTPRN2-203ENST00000389418 KIF5BP33176 963 aa15.1■□□□□ 0.01
PTPRN2-203ENST00000389418 PDE4BQ07343 736 aa15.1■□□□□ 0.01
PTPRN2-203ENST00000389418 CATIPQ7Z7H3 387 aa15.1■□□□□ 0.01
PTPRN2-203ENST00000389418 FEZ1Q99689 392 aa15.1■□□□□ 0.01
PTPRN2-203ENST00000389418 KCNQ4P56696 695 aa15.1■□□□□ 0.01
PTPRN2-203ENST00000389418 MAP3K5Q99683 1374 aa15.1■□□□□ 0.01
PTPRN2-203ENST00000389418 CCDC178Q5BJE1 867 aa15.09■□□□□ 0.01
PTPRN2-203ENST00000389418 CHST3Q7LGC8 479 aa15.09■□□□□ 0.01
PTPRN2-203ENST00000389418 MIGA1Q8NAN2 632 aa15.09■□□□□ 0.01
PTPRN2-203ENST00000389418 CAGE1Q8TC20 777 aa15.09■□□□□ 0.01
PTPRN2-203ENST00000389418 SBNO2Q9Y2G9 1366 aa15.09■□□□□ 0.01
PTPRN2-203ENST00000389418 NYXQ9GZU5 481 aa15.09■□□□□ 0.01
PTPRN2-203ENST00000389418 NECAB1Q8N987 351 aa15.09■□□□□ 0.01
PTPRN2-203ENST00000389418 EHMT1Q9H9B1 1298 aa15.09■□□□□ 0.01
PTPRN2-203ENST00000389418 PREX2Q70Z35 1606 aa15.09■□□□□ 0.01
PTPRN2-203ENST00000389418 IRS4O14654 1257 aaPredicted RBP15.09■□□□□ 0.01
PTPRN2-203ENST00000389418 DNAJC10Q8IXB1 793 aa15.09■□□□□ 0.01
PTPRN2-203ENST00000389418 NDUFB9Q9Y6M9 179 aa15.09■□□□□ 0.01
PTPRN2-203ENST00000389418 MAGI2Q86UL8 1455 aa15.08■□□□□ 0.01
PTPRN2-203ENST00000389418 TSPY2A6NKD2 308 aa15.08■□□□□ 0.01
PTPRN2-203ENST00000389418 TIMM10P62072 90 aa15.08■□□□□ 0.01
PTPRN2-203ENST00000389418 TRAF1Q13077 416 aa15.08■□□□□ 0.01
PTPRN2-203ENST00000389418 MAP3K11Q16584 847 aa15.08■□□□□ 0.01
PTPRN2-203ENST00000389418 FILIP1Q7Z7B0 1213 aa15.08■□□□□ 0
PTPRN2-203ENST00000389418 PDCL3Q9H2J4 239 aa15.08■□□□□ 0
PTPRN2-203ENST00000389418 ZBTB40Q9NUA8 1239 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms