RNA–Protein interactions for RNA: ENST00000389005.5

NCBP3-201, Transcript of nuclear cap binding subunit 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NCBP3, Length 12,770 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-201ENST00000389005 YEATS4O95619 227 aa9.24□□□□□ -0.93
NCBP3-201ENST00000389005 ANXA1P04083 346 aa9.24□□□□□ -0.93
NCBP3-201ENST00000389005 ZNF445P59923 1031 aa9.24□□□□□ -0.93
NCBP3-201ENST00000389005 GTPBP4Q9BZE4 634 aaKnown RBP9.24□□□□□ -0.93
NCBP3-201ENST00000389005 WDR62O43379 1518 aa9.24□□□□□ -0.93
NCBP3-201ENST00000389005 GOLGA8AA7E2F4 631 aa9.24□□□□□ -0.93
NCBP3-201ENST00000389005 AK2P54819 239 aa9.24□□□□□ -0.93
NCBP3-201ENST00000389005 POLR3DP05423 398 aaPredicted RBP9.24□□□□□ -0.93
NCBP3-201ENST00000389005 PTGS1P23219 599 aa9.24□□□□□ -0.93
NCBP3-201ENST00000389005 MRPS27Q92552 414 aaKnown RBP9.24□□□□□ -0.93
NCBP3-201ENST00000389005 SYCP1Q15431 976 aa9.23□□□□□ -0.93
NCBP3-201ENST00000389005 CCDC82Q8N4S0 544 aa9.23□□□□□ -0.93
NCBP3-201ENST00000389005 LRRC2Q9BYS8 371 aa9.23□□□□□ -0.93
NCBP3-201ENST00000389005 SPATA31E1Q6ZUB1 1445 aa9.23□□□□□ -0.93
NCBP3-201ENST00000389005 LMAN1P49257 510 aa9.23□□□□□ -0.93
NCBP3-201ENST00000389005 PRDM11Q9NQV5 511 aa9.23□□□□□ -0.93
NCBP3-201ENST00000389005 SYKP43405 635 aa9.23□□□□□ -0.93
NCBP3-201ENST00000389005 CCDC12Q8WUD4 166 aaPredicted RBP9.23□□□□□ -0.93
NCBP3-201ENST00000389005 PHACTR3Q96KR7 559 aa9.23□□□□□ -0.93
NCBP3-201ENST00000389005 DNAI1Q9UI46 699 aa9.23□□□□□ -0.93
NCBP3-201ENST00000389005 CHMLP26374 656 aa9.23□□□□□ -0.93
NCBP3-201ENST00000389005 ZSWIM4Q9H7M6 989 aa9.23□□□□□ -0.93
NCBP3-201ENST00000389005 HAND2P61296 217 aa9.23□□□□□ -0.93
NCBP3-201ENST00000389005 POLKQ9UBT6 870 aa9.23□□□□□ -0.93
NCBP3-201ENST00000389005 ZBTB7BO15156 539 aaPredicted RBP9.23□□□□□ -0.93
NCBP3-201ENST00000389005 SYT1P21579 422 aa9.23□□□□□ -0.93
NCBP3-201ENST00000389005 OTUD7AQ8TE49 926 aaPredicted RBP9.22□□□□□ -0.93
NCBP3-201ENST00000389005 UBE3BQ7Z3V4 1068 aa9.22□□□□□ -0.93
NCBP3-201ENST00000389005 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.22□□□□□ -0.93
NCBP3-201ENST00000389005 V9GYY5 206 aaPredicted RBP9.22□□□□□ -0.93
NCBP3-201ENST00000389005 UBASH3AP57075 661 aa9.22□□□□□ -0.93
NCBP3-201ENST00000389005 ZC3H6P61129 1189 aaKnown RBP9.22□□□□□ -0.93
NCBP3-201ENST00000389005 IFIT5Q13325 482 aaKnown RBP9.22□□□□□ -0.93
NCBP3-201ENST00000389005 IFIT3O14879 490 aaKnown RBP9.22□□□□□ -0.93
NCBP3-201ENST00000389005 SSRP1Q08945 709 aaKnown RBP9.22□□□□□ -0.93
NCBP3-201ENST00000389005 FAM107BQ9H098 131 aa9.22□□□□□ -0.93
NCBP3-201ENST00000389005 FKBP15Q5T1M5 1219 aa9.22□□□□□ -0.93
NCBP3-201ENST00000389005 RAB11FIP4Q86YS3 637 aa9.22□□□□□ -0.93
NCBP3-201ENST00000389005 SLU7O95391 586 aaKnown RBP9.22□□□□□ -0.93
NCBP3-201ENST00000389005 MICU3Q86XE3 530 aa9.22□□□□□ -0.93
NCBP3-201ENST00000389005 KCNG4Q8TDN1 519 aa9.22□□□□□ -0.93
NCBP3-201ENST00000389005 A2MP01023 1474 aa9.22□□□□□ -0.93
NCBP3-201ENST00000389005 SMARCC1Q92922 1105 aaPredicted RBP9.22□□□□□ -0.93
NCBP3-201ENST00000389005 TUBB4AP04350 444 aa9.22□□□□□ -0.93
NCBP3-201ENST00000389005 IGHMBP2P38935 993 aaKnown RBP9.22□□□□□ -0.93
NCBP3-201ENST00000389005 TERF1P54274 439 aa9.22□□□□□ -0.93
NCBP3-201ENST00000389005 AOPEPQ8N6M6 819 aa9.22□□□□□ -0.93
NCBP3-201ENST00000389005 ALDH1L1O75891 902 aa9.22□□□□□ -0.93
NCBP3-201ENST00000389005 IARSP41252 1262 aaKnown RBP9.22□□□□□ -0.93
NCBP3-201ENST00000389005 MAP3K12Q12852 859 aa9.22□□□□□ -0.93
NCBP3-201ENST00000389005 ISM2Q6H9L7 571 aa9.22□□□□□ -0.93
NCBP3-201ENST00000389005 ARFGAP3Q9NP61 516 aa9.22□□□□□ -0.93
NCBP3-201ENST00000389005 ATP2B2Q01814 1243 aa9.21□□□□□ -0.93
NCBP3-201ENST00000389005 TAX1BP1Q86VP1 789 aa9.21□□□□□ -0.93
NCBP3-201ENST00000389005 CTCFLQ8NI51 663 aaPredicted RBP9.21□□□□□ -0.93
NCBP3-201ENST00000389005 SRRTQ9BXP5 876 aaKnown RBP9.21□□□□□ -0.93
NCBP3-201ENST00000389005 SOS1Q07889 1333 aaPredicted RBP9.21□□□□□ -0.93
NCBP3-201ENST00000389005 ZFYVE9O95405 1425 aa9.21□□□□□ -0.93
NCBP3-201ENST00000389005 LUZP1Q86V48 1076 aa9.21□□□□□ -0.93
NCBP3-201ENST00000389005 TTC41PQ6P2S7 1318 aa9.21□□□□□ -0.93
NCBP3-201ENST00000389005 CHPF2Q9P2E5 772 aa9.21□□□□□ -0.93
NCBP3-201ENST00000389005 Q6ZUG5 572 aa9.21□□□□□ -0.93
NCBP3-201ENST00000389005 ABCF2Q9UG63 623 aa9.21□□□□□ -0.93
NCBP3-201ENST00000389005 NCOA7Q8NI08 942 aa9.21□□□□□ -0.94
NCBP3-201ENST00000389005 MINDY4BA8MYZ0 360 aa9.21□□□□□ -0.94
NCBP3-201ENST00000389005 PTCD1O75127 700 aaKnown RBP9.21□□□□□ -0.94
NCBP3-201ENST00000389005 PAFAH1B1P43034 410 aa9.21□□□□□ -0.94
NCBP3-201ENST00000389005 SNRKQ9NRH2 765 aa9.21□□□□□ -0.94
NCBP3-201ENST00000389005 DDX46Q7L014 1031 aaKnown RBP9.21□□□□□ -0.94
NCBP3-201ENST00000389005 ANKLE2Q86XL3 938 aa9.21□□□□□ -0.94
NCBP3-201ENST00000389005 USO1O60763 962 aaKnown RBP9.21□□□□□ -0.94
NCBP3-201ENST00000389005 RNF41Q9H4P4 317 aaPredicted RBP9.21□□□□□ -0.94
NCBP3-201ENST00000389005 PHF8Q9UPP1 1060 aa9.21□□□□□ -0.94
NCBP3-201ENST00000389005 SEPT11Q9NVA2 429 aaKnown RBP9.21□□□□□ -0.94
NCBP3-201ENST00000389005 KRT24Q2M2I5 525 aa9.2□□□□□ -0.94
NCBP3-201ENST00000389005 FEZ1Q99689 392 aa9.2□□□□□ -0.94
NCBP3-201ENST00000389005 CTR9Q6PD62 1173 aa9.2□□□□□ -0.94
NCBP3-201ENST00000389005 KLF18A0A0U1RQI7 1052 aa9.2□□□□□ -0.94
NCBP3-201ENST00000389005 EIF4A2Q14240 407 aaKnown RBP9.2□□□□□ -0.94
NCBP3-201ENST00000389005 PLCH2O75038 1416 aa9.2□□□□□ -0.94
NCBP3-201ENST00000389005 METAP2P50579 478 aaKnown RBP eCLIP9.2□□□□□ -0.94
NCBP3-201ENST00000389005 SMAP1Q8IYB5 467 aaPredicted RBP9.2□□□□□ -0.94
NCBP3-201ENST00000389005 KANK3Q6NY19 840 aa9.2□□□□□ -0.94
NCBP3-201ENST00000389005 LIG1P18858 919 aa9.2□□□□□ -0.94
NCBP3-201ENST00000389005 LMBRD1Q9NUN5 540 aa9.2□□□□□ -0.94
NCBP3-201ENST00000389005 ACEP12821 1306 aa9.2□□□□□ -0.94
NCBP3-201ENST00000389005 CREB3L3Q68CJ9 461 aa9.2□□□□□ -0.94
NCBP3-201ENST00000389005 A0A1W2PP64 1363 aa9.2□□□□□ -0.94
NCBP3-201ENST00000389005 MSH6P52701 1360 aa9.2□□□□□ -0.94
NCBP3-201ENST00000389005 TMEM67Q5HYA8 995 aa9.2□□□□□ -0.94
NCBP3-201ENST00000389005 DNAJC5BQ9UF47 199 aa9.2□□□□□ -0.94
NCBP3-201ENST00000389005 N4BP3O15049 544 aa9.2□□□□□ -0.94
NCBP3-201ENST00000389005 NMIQ13287 307 aaPredicted RBP9.2□□□□□ -0.94
NCBP3-201ENST00000389005 RANBP6O60518 1105 aaKnown RBP9.19□□□□□ -0.94
NCBP3-201ENST00000389005 STARD3NLO95772 234 aa9.19□□□□□ -0.94
NCBP3-201ENST00000389005 ATP5J2-PTCD1G3V325 749 aa9.19□□□□□ -0.94
NCBP3-201ENST00000389005 LMOD1P29536 600 aaPredicted RBP9.19□□□□□ -0.94
NCBP3-201ENST00000389005 ENOX2Q16206 610 aaKnown RBP9.19□□□□□ -0.94
NCBP3-201ENST00000389005 AMOTL2Q9Y2J4 779 aa9.19□□□□□ -0.94
NCBP3-201ENST00000389005 ZMYM3Q14202 1370 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms