RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 CCDC171Q6TFL3 1326 aa18■□□□□ 0.47
SCFD2-201ENST00000388940 CCDC8Q9H0W5 538 aaPredicted RBP17.99■□□□□ 0.47
SCFD2-201ENST00000388940 CHRNA2Q15822 529 aa17.99■□□□□ 0.47
SCFD2-201ENST00000388940 RABL6Q3YEC7 729 aaPredicted RBP17.99■□□□□ 0.47
SCFD2-201ENST00000388940 EPHA10Q5JZY3 1008 aa17.99■□□□□ 0.47
SCFD2-201ENST00000388940 FOXD4L5Q5VV16 416 aaPredicted RBP17.99■□□□□ 0.47
SCFD2-201ENST00000388940 FOXD4L4Q8WXT5 416 aaPredicted RBP17.99■□□□□ 0.47
SCFD2-201ENST00000388940 MAP4K1Q92918 833 aa17.99■□□□□ 0.47
SCFD2-201ENST00000388940 ZSCAN31Q96LW9 406 aaPredicted RBP17.99■□□□□ 0.47
SCFD2-201ENST00000388940 RPAP1Q9BWH6 1393 aaPredicted RBP17.99■□□□□ 0.47
SCFD2-201ENST00000388940 CASTP20810 708 aaKnown RBP17.98■□□□□ 0.47
SCFD2-201ENST00000388940 ANP32BQ92688 251 aaKnown RBP17.98■□□□□ 0.47
SCFD2-201ENST00000388940 CHAMP1Q96JM3 812 aa17.98■□□□□ 0.47
SCFD2-201ENST00000388940 TMEM63CQ9P1W3 806 aa17.98■□□□□ 0.47
SCFD2-201ENST00000388940 ERBB4Q15303 1308 aa17.98■□□□□ 0.47
SCFD2-201ENST00000388940 RFX5P48382 616 aaPredicted RBP17.98■□□□□ 0.47
SCFD2-201ENST00000388940 CABP4P57796 275 aa17.98■□□□□ 0.47
SCFD2-201ENST00000388940 LRSAM1Q6UWE0 723 aa17.98■□□□□ 0.47
SCFD2-201ENST00000388940 TRIM44Q96DX7 344 aaPredicted RBP17.98■□□□□ 0.47
SCFD2-201ENST00000388940 PRPF40BQ6NWY9 871 aaKnown RBP17.97■□□□□ 0.47
SCFD2-201ENST00000388940 RBM27Q9P2N5 1060 aaKnown RBP17.97■□□□□ 0.47
SCFD2-201ENST00000388940 ESPNB1AK53 854 aa17.96■□□□□ 0.47
SCFD2-201ENST00000388940 ZKSCAN1P17029 563 aaPredicted RBP17.96■□□□□ 0.47
SCFD2-201ENST00000388940 NMIQ13287 307 aaPredicted RBP17.96■□□□□ 0.47
SCFD2-201ENST00000388940 TMEM87AQ8NBN3 555 aa17.96■□□□□ 0.47
SCFD2-201ENST00000388940 PLBD2Q8NHP8 589 aa17.96■□□□□ 0.47
SCFD2-201ENST00000388940 SH2B1Q9NRF2 756 aaPredicted RBP17.96■□□□□ 0.47
SCFD2-201ENST00000388940 PDRG1Q9NUG6 133 aa17.96■□□□□ 0.47
SCFD2-201ENST00000388940 TLR7Q9NYK1 1049 aaKnown RBP17.96■□□□□ 0.47
SCFD2-201ENST00000388940 NSFL1CQ9UNZ2 370 aaKnown RBP17.96■□□□□ 0.47
SCFD2-201ENST00000388940 CYP46A1Q9Y6A2 500 aa17.96■□□□□ 0.47
SCFD2-201ENST00000388940 TCHHQ07283 1943 aa17.96■□□□□ 0.47
SCFD2-201ENST00000388940 XIRP1Q702N8 1843 aaKnown RBP17.96■□□□□ 0.47
SCFD2-201ENST00000388940 PRIM1P49642 420 aaKnown RBP17.96■□□□□ 0.47
SCFD2-201ENST00000388940 JAKMIP1Q96N16 626 aaKnown RBP17.96■□□□□ 0.47
SCFD2-201ENST00000388940 SIL1Q9H173 461 aa17.96■□□□□ 0.47
SCFD2-201ENST00000388940 UBR2Q8IWV8 1755 aa17.95■□□□□ 0.46
SCFD2-201ENST00000388940 ADCK5Q3MIX3 580 aa17.95■□□□□ 0.46
SCFD2-201ENST00000388940 RBSNQ9H1K0 784 aa17.95■□□□□ 0.46
SCFD2-201ENST00000388940 RBM8AQ9Y5S9 174 aaKnown RBP17.95■□□□□ 0.46
SCFD2-201ENST00000388940 JCADQ9P266 1359 aa17.95■□□□□ 0.46
SCFD2-201ENST00000388940 MED23Q9ULK4 1368 aa17.95■□□□□ 0.46
SCFD2-201ENST00000388940 ZSCAN22P10073 491 aaPredicted RBP17.95■□□□□ 0.46
SCFD2-201ENST00000388940 PTPN12Q05209 780 aaKnown RBP17.95■□□□□ 0.46
SCFD2-201ENST00000388940 CREB3L3Q68CJ9 461 aa17.95■□□□□ 0.46
SCFD2-201ENST00000388940 FAM227BQ96M60 508 aa17.95■□□□□ 0.46
SCFD2-201ENST00000388940 BOLA2Q9H3K6 86 aa17.95■□□□□ 0.46
SCFD2-201ENST00000388940 ATP5JP18859 108 aa17.94■□□□□ 0.46
SCFD2-201ENST00000388940 CASP7P55210 303 aa17.94■□□□□ 0.46
SCFD2-201ENST00000388940 KLHDC4Q8TBB5 520 aa17.94■□□□□ 0.46
SCFD2-201ENST00000388940 SMC3Q9UQE7 1217 aa17.94■□□□□ 0.46
SCFD2-201ENST00000388940 RFX7Q2KHR2 1363 aa17.94■□□□□ 0.46
SCFD2-201ENST00000388940 PSMA5P28066 241 aa17.94■□□□□ 0.46
SCFD2-201ENST00000388940 SYAP1Q96A49 352 aaPredicted RBP17.94■□□□□ 0.46
SCFD2-201ENST00000388940 FSD1Q9BTV5 496 aa17.94■□□□□ 0.46
SCFD2-201ENST00000388940 ALDH8A1Q9H2A2 487 aaPredicted RBP17.94■□□□□ 0.46
SCFD2-201ENST00000388940 STX6O43752 255 aa17.93■□□□□ 0.46
SCFD2-201ENST00000388940 WDR17Q8IZU2 1322 aa17.93■□□□□ 0.46
SCFD2-201ENST00000388940 CPA1P15085 419 aa17.92■□□□□ 0.46
SCFD2-201ENST00000388940 SYT1P21579 422 aa17.92■□□□□ 0.46
SCFD2-201ENST00000388940 TSGA10IPQ3SY00 556 aa17.92■□□□□ 0.46
SCFD2-201ENST00000388940 TNNI3KQ59H18 835 aa17.92■□□□□ 0.46
SCFD2-201ENST00000388940 FPGT-TNNI3KV9GXZ4 949 aa17.92■□□□□ 0.46
SCFD2-201ENST00000388940 PCDH11XQ9BZA7 1347 aa17.92■□□□□ 0.46
SCFD2-201ENST00000388940 PCDH11YQ9BZA8 1340 aa17.92■□□□□ 0.46
SCFD2-201ENST00000388940 NUP188Q5SRE5 1749 aa17.92■□□□□ 0.46
SCFD2-201ENST00000388940 A0A0D9SFI3 127 aa17.92■□□□□ 0.46
SCFD2-201ENST00000388940 ERVV-2B6SEH9 535 aa17.92■□□□□ 0.46
SCFD2-201ENST00000388940 SLC27A2O14975 620 aa17.92■□□□□ 0.46
SCFD2-201ENST00000388940 PDIA4P13667 645 aaKnown RBP17.92■□□□□ 0.46
SCFD2-201ENST00000388940 RNF20Q5VTR2 975 aa17.92■□□□□ 0.46
SCFD2-201ENST00000388940 UBE3BQ7Z3V4 1068 aa17.92■□□□□ 0.46
SCFD2-201ENST00000388940 USP48Q86UV5 1035 aa17.92■□□□□ 0.46
SCFD2-201ENST00000388940 ATP6V1DQ9Y5K8 247 aa17.92■□□□□ 0.46
SCFD2-201ENST00000388940 PAPPAQ13219 1627 aa17.92■□□□□ 0.46
SCFD2-201ENST00000388940 A0A087WZG4 1122 aa17.91■□□□□ 0.46
SCFD2-201ENST00000388940 SYCE3A1L190 88 aa17.91■□□□□ 0.46
SCFD2-201ENST00000388940 LARGE1O95461 756 aa17.91■□□□□ 0.46
SCFD2-201ENST00000388940 H7C1W4 665 aa17.91■□□□□ 0.46
SCFD2-201ENST00000388940 KCNJ4P48050 445 aa17.91■□□□□ 0.46
SCFD2-201ENST00000388940 PIP4K2AP48426 406 aaPredicted RBP17.91■□□□□ 0.46
SCFD2-201ENST00000388940 NKX1-1Q15270 411 aaPredicted RBP17.91■□□□□ 0.46
SCFD2-201ENST00000388940 ZCRB1Q8TBF4 217 aaKnown RBP17.91■□□□□ 0.46
SCFD2-201ENST00000388940 PDLIM2Q96JY6 352 aa17.91■□□□□ 0.46
SCFD2-201ENST00000388940 HMG20BQ9P0W2 317 aa17.91■□□□□ 0.46
SCFD2-201ENST00000388940 DBNLQ9UJU6 430 aaKnown RBP17.91■□□□□ 0.46
SCFD2-201ENST00000388940 F13A1P00488 732 aa17.9■□□□□ 0.46
SCFD2-201ENST00000388940 TFCP2Q12800 502 aa17.9■□□□□ 0.46
SCFD2-201ENST00000388940 HS1BP3Q53T59 392 aa17.9■□□□□ 0.46
SCFD2-201ENST00000388940 BRINP3Q76B58 766 aa17.9■□□□□ 0.46
SCFD2-201ENST00000388940 NBPF26B4DH59 902 aa17.9■□□□□ 0.46
SCFD2-201ENST00000388940 NBPF14Q5TI25 921 aa17.9■□□□□ 0.46
SCFD2-201ENST00000388940 USPL1Q5W0Q7 1092 aa17.9■□□□□ 0.46
SCFD2-201ENST00000388940 NBPF10Q6P3W6 841 aaKnown RBP17.9■□□□□ 0.46
SCFD2-201ENST00000388940 KLHL34Q8N239 644 aa17.9■□□□□ 0.46
SCFD2-201ENST00000388940 NBPF15Q8N660 670 aa17.9■□□□□ 0.46
SCFD2-201ENST00000388940 LARP6Q9BRS8 491 aaKnown RBP17.9■□□□□ 0.46
SCFD2-201ENST00000388940 GJB2P29033 226 aa17.89■□□□□ 0.45
SCFD2-201ENST00000388940 ANKRD1Q15327 319 aa17.89■□□□□ 0.45
SCFD2-201ENST00000388940 CCDC83Q8IWF9 413 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms