RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 KCNQ4P56696 695 aa17.98■□□□□ 0.47
SYNGR1-204ENST00000381535 HSP90AB4PQ58FF6 505 aa17.98■□□□□ 0.47
SYNGR1-204ENST00000381535 RC3H1Q5TC82 1133 aaKnown RBP17.98■□□□□ 0.47
SYNGR1-204ENST00000381535 CCNL1Q9UK58 526 aaPredicted RBP17.98■□□□□ 0.47
SYNGR1-204ENST00000381535 NOP58Q9Y2X3 529 aaKnown RBP17.98■□□□□ 0.47
SYNGR1-204ENST00000381535 COL15A1P39059 1388 aa17.97■□□□□ 0.47
SYNGR1-204ENST00000381535 PLEKHM2Q8IWE5 1019 aa17.97■□□□□ 0.47
SYNGR1-204ENST00000381535 LRP5O75197 1615 aa17.97■□□□□ 0.47
SYNGR1-204ENST00000381535 TXNRD1Q16881 649 aa17.96■□□□□ 0.47
SYNGR1-204ENST00000381535 C8orf34Q49A92 452 aa17.96■□□□□ 0.47
SYNGR1-204ENST00000381535 NHSQ6T4R5 1651 aa17.96■□□□□ 0.47
SYNGR1-204ENST00000381535 CNTNAP4Q9C0A0 1308 aa17.96■□□□□ 0.46
SYNGR1-204ENST00000381535 NUP188Q5SRE5 1749 aa17.95■□□□□ 0.46
SYNGR1-204ENST00000381535 PCCAP05165 728 aaPredicted RBP17.95■□□□□ 0.46
SYNGR1-204ENST00000381535 GPTP24298 496 aa17.95■□□□□ 0.46
SYNGR1-204ENST00000381535 OS9Q13438 667 aaPredicted RBP17.95■□□□□ 0.46
SYNGR1-204ENST00000381535 RABL6Q3YEC7 729 aaPredicted RBP17.95■□□□□ 0.46
SYNGR1-204ENST00000381535 RTL5Q5HYW3 569 aaPredicted RBP17.95■□□□□ 0.46
SYNGR1-204ENST00000381535 NLRP10Q86W26 655 aa17.95■□□□□ 0.46
SYNGR1-204ENST00000381535 AFDNP55196 1824 aaKnown RBP17.95■□□□□ 0.46
SYNGR1-204ENST00000381535 BTAF1O14981 1849 aa17.94■□□□□ 0.46
SYNGR1-204ENST00000381535 FOXO4P98177 505 aa17.94■□□□□ 0.46
SYNGR1-204ENST00000381535 G3BP1Q13283 466 aaKnown RBP eCLIP17.94■□□□□ 0.46
SYNGR1-204ENST00000381535 ZNF34Q8IZ26 560 aa17.94■□□□□ 0.46
SYNGR1-204ENST00000381535 RHPN1Q8TCX5 695 aa17.94■□□□□ 0.46
SYNGR1-204ENST00000381535 KIF1BPQ96EK5 621 aa17.94■□□□□ 0.46
SYNGR1-204ENST00000381535 ANO8Q9HCE9 1232 aaPredicted RBP17.94■□□□□ 0.46
SYNGR1-204ENST00000381535 PA2G4Q9UQ80 394 aaKnown RBP17.94■□□□□ 0.46
SYNGR1-204ENST00000381535 RPS6KA4O75676 772 aa17.93■□□□□ 0.46
SYNGR1-204ENST00000381535 CAMTA2O94983 1202 aa17.93■□□□□ 0.46
SYNGR1-204ENST00000381535 LMBR1LQ6UX01 489 aa17.93■□□□□ 0.46
SYNGR1-204ENST00000381535 ZBTB38Q8NAP3 1195 aaPredicted RBP17.93■□□□□ 0.46
SYNGR1-204ENST00000381535 OTUD7AQ8TE49 926 aaPredicted RBP17.93■□□□□ 0.46
SYNGR1-204ENST00000381535 CICQ96RK0 1608 aaPredicted RBP17.93■□□□□ 0.46
SYNGR1-204ENST00000381535 MYH14Q7Z406 1995 aaKnown RBP17.93■□□□□ 0.46
SYNGR1-204ENST00000381535 ZNF831Q5JPB2 1677 aa17.93■□□□□ 0.46
SYNGR1-204ENST00000381535 RREB1Q92766 1687 aa17.93■□□□□ 0.46
SYNGR1-204ENST00000381535 ERC1Q8IUD2 1116 aa17.92■□□□□ 0.46
SYNGR1-204ENST00000381535 FAM89AQ96GI7 184 aa17.92■□□□□ 0.46
SYNGR1-204ENST00000381535 SPON1Q9HCB6 807 aa17.92■□□□□ 0.46
SYNGR1-204ENST00000381535 SBF2Q86WG5 1849 aa17.92■□□□□ 0.46
SYNGR1-204ENST00000381535 RFX5P48382 616 aaPredicted RBP17.91■□□□□ 0.46
SYNGR1-204ENST00000381535 BMP2KLQ5H9B9 411 aa17.91■□□□□ 0.46
SYNGR1-204ENST00000381535 PLA2G12BQ9BX93 195 aa17.91■□□□□ 0.46
SYNGR1-204ENST00000381535 IL1RAPL2Q9NP60 686 aa17.91■□□□□ 0.46
SYNGR1-204ENST00000381535 COPRSQ9NQ92 184 aa17.91■□□□□ 0.46
SYNGR1-204ENST00000381535 CLEC4GQ6UXB4 293 aa17.9■□□□□ 0.46
SYNGR1-204ENST00000381535 TRMT112Q9UI30 125 aaKnown RBP17.9■□□□□ 0.46
SYNGR1-204ENST00000381535 ZNF652Q9Y2D9 606 aa17.9■□□□□ 0.46
SYNGR1-204ENST00000381535 CHMP3Q9Y3E7 222 aa17.9■□□□□ 0.46
SYNGR1-204ENST00000381535 GNPATO15228 680 aa17.89■□□□□ 0.45
SYNGR1-204ENST00000381535 PDE1AP54750 535 aa17.89■□□□□ 0.45
SYNGR1-204ENST00000381535 PTPN12Q05209 780 aaKnown RBP17.89■□□□□ 0.45
SYNGR1-204ENST00000381535 SLC15A2Q16348 729 aa17.89■□□□□ 0.45
SYNGR1-204ENST00000381535 PARP10Q53GL7 1025 aa17.89■□□□□ 0.45
SYNGR1-204ENST00000381535 OSBPL3Q9H4L5 887 aa17.89■□□□□ 0.45
SYNGR1-204ENST00000381535 RTCBQ9Y3I0 505 aaKnown RBP17.89■□□□□ 0.45
SYNGR1-204ENST00000381535 CDHR2Q9BYE9 1310 aa17.89■□□□□ 0.45
SYNGR1-204ENST00000381535 SLC27A3Q5K4L6 730 aa17.88■□□□□ 0.45
SYNGR1-204ENST00000381535 TTC22Q5TAA0 569 aa17.88■□□□□ 0.45
SYNGR1-204ENST00000381535 SUSD4Q5VX71 490 aa17.88■□□□□ 0.45
SYNGR1-204ENST00000381535 KLHDC4Q8TBB5 520 aa17.88■□□□□ 0.45
SYNGR1-204ENST00000381535 UTP14AQ9BVJ6 771 aaKnown RBP17.88■□□□□ 0.45
SYNGR1-204ENST00000381535 PDGFDQ9GZP0 370 aaPredicted RBP17.88■□□□□ 0.45
SYNGR1-204ENST00000381535 SIL1Q9H173 461 aa17.88■□□□□ 0.45
SYNGR1-204ENST00000381535 COL5A3P25940 1745 aaPredicted RBP17.87■□□□□ 0.45
SYNGR1-204ENST00000381535 RGPD3A6NKT7 1758 aaPredicted RBP17.87■□□□□ 0.45
SYNGR1-204ENST00000381535 RGPD4Q7Z3J3 1758 aa17.87■□□□□ 0.45
SYNGR1-204ENST00000381535 NUP98P52948 1817 aa17.87■□□□□ 0.45
SYNGR1-204ENST00000381535 IRS4O14654 1257 aaPredicted RBP17.87■□□□□ 0.45
SYNGR1-204ENST00000381535 RGL2O15211 777 aa17.87■□□□□ 0.45
SYNGR1-204ENST00000381535 SASH1O94885 1247 aa17.87■□□□□ 0.45
SYNGR1-204ENST00000381535 CSF1RP07333 972 aa17.87■□□□□ 0.45
SYNGR1-204ENST00000381535 SMIM5Q71RC9 77 aa17.87■□□□□ 0.45
SYNGR1-204ENST00000381535 NUTM1Q86Y26 1132 aa17.87■□□□□ 0.45
SYNGR1-204ENST00000381535 SYNE4Q8N205 404 aa17.87■□□□□ 0.45
SYNGR1-204ENST00000381535 CLASRPQ8N2M8 674 aaKnown RBP17.87■□□□□ 0.45
SYNGR1-204ENST00000381535 LRRC4BQ9NT99 713 aa17.87■□□□□ 0.45
SYNGR1-204ENST00000381535 STK32BQ9NY57 414 aa17.87■□□□□ 0.45
SYNGR1-204ENST00000381535 STAP2Q9UGK3 403 aa17.87■□□□□ 0.45
SYNGR1-204ENST00000381535 NARFQ9UHQ1 456 aa17.87■□□□□ 0.45
SYNGR1-204ENST00000381535 NIP7Q9Y221 180 aaKnown RBP eCLIP17.87■□□□□ 0.45
SYNGR1-204ENST00000381535 UBN2Q6ZU65 1347 aa17.87■□□□□ 0.45
SYNGR1-204ENST00000381535 MX1P20591 662 aa17.86■□□□□ 0.45
SYNGR1-204ENST00000381535 HMGB2P26583 209 aaKnown RBP17.86■□□□□ 0.45
SYNGR1-204ENST00000381535 TRAPPC3LQ5T215 181 aa17.86■□□□□ 0.45
SYNGR1-204ENST00000381535 AK7Q96M32 723 aa17.86■□□□□ 0.45
SYNGR1-204ENST00000381535 SALL3Q9BXA9 1300 aa17.86■□□□□ 0.45
SYNGR1-204ENST00000381535 MSH5O43196 834 aa17.85■□□□□ 0.45
SYNGR1-204ENST00000381535 PDE8AO60658 829 aa17.85■□□□□ 0.45
SYNGR1-204ENST00000381535 ZPR1O75312 459 aa17.85■□□□□ 0.45
SYNGR1-204ENST00000381535 GSPT1P15170 499 aaKnown RBP17.85■□□□□ 0.45
SYNGR1-204ENST00000381535 ARHGEF1Q92888 912 aaKnown RBP17.85■□□□□ 0.45
SYNGR1-204ENST00000381535 LY75O60449 1722 aa17.84■□□□□ 0.45
SYNGR1-204ENST00000381535 FAM177BA6PVY3 158 aa17.84■□□□□ 0.45
SYNGR1-204ENST00000381535 SEC24BO95487 1268 aa17.84■□□□□ 0.45
SYNGR1-204ENST00000381535 CCDC57Q2TAC2 916 aa17.84■□□□□ 0.45
SYNGR1-204ENST00000381535 USPL1Q5W0Q7 1092 aa17.84■□□□□ 0.45
SYNGR1-204ENST00000381535 SH3TC1Q8TE82 1336 aa17.83■□□□□ 0.44
SYNGR1-204ENST00000381535 IFIT2P09913 472 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms