RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 IFIT2P09913 472 aaKnown RBP6.57□□□□□ -1.36
GEN1-202ENST00000381254 EPHX2P34913 555 aa6.57□□□□□ -1.36
GEN1-202ENST00000381254 HUNKP57058 714 aa6.57□□□□□ -1.36
GEN1-202ENST00000381254 NOGQ13253 232 aa6.57□□□□□ -1.36
GEN1-202ENST00000381254 CIAPIN1Q6FI81 312 aa6.57□□□□□ -1.36
GEN1-202ENST00000381254 NME9Q86XW9 330 aa6.57□□□□□ -1.36
GEN1-202ENST00000381254 FAM13BQ9NYF5 915 aa6.57□□□□□ -1.36
GEN1-202ENST00000381254 TECPR2O15040 1411 aa6.57□□□□□ -1.36
GEN1-202ENST00000381254 ERVV-2B6SEH9 535 aa6.56□□□□□ -1.36
GEN1-202ENST00000381254 NPR1P16066 1061 aa6.56□□□□□ -1.36
GEN1-202ENST00000381254 HS1BP3Q53T59 392 aa6.56□□□□□ -1.36
GEN1-202ENST00000381254 ANKRD45Q5TZF3 282 aa6.56□□□□□ -1.36
GEN1-202ENST00000381254 DZIP3Q86Y13 1208 aaKnown RBP6.56□□□□□ -1.36
GEN1-202ENST00000381254 CNTROBQ8N137 903 aa6.56□□□□□ -1.36
GEN1-202ENST00000381254 BTBD11A6QL63 1104 aa6.56□□□□□ -1.36
GEN1-202ENST00000381254 RDXP35241 583 aaKnown RBP6.56□□□□□ -1.36
GEN1-202ENST00000381254 ERO1AQ96HE7 468 aa6.56□□□□□ -1.36
GEN1-202ENST00000381254 MPHOSPH8Q99549 860 aa6.56□□□□□ -1.36
GEN1-202ENST00000381254 AHDC1Q5TGY3 1603 aaPredicted RBP6.56□□□□□ -1.36
GEN1-202ENST00000381254 ZSCAN25Q6NSZ9 544 aa6.56□□□□□ -1.36
GEN1-202ENST00000381254 CEP89Q96ST8 783 aa6.56□□□□□ -1.36
GEN1-202ENST00000381254 SETD1AO15047 1707 aaKnown RBP6.56□□□□□ -1.36
GEN1-202ENST00000381254 ZC3H4Q9UPT8 1303 aaKnown RBP6.56□□□□□ -1.36
GEN1-202ENST00000381254 KDM5AP29375 1690 aaKnown RBP6.56□□□□□ -1.36
GEN1-202ENST00000381254 NUTM1Q86Y26 1132 aa6.56□□□□□ -1.36
GEN1-202ENST00000381254 ZSCAN29Q8IWY8 852 aaPredicted RBP6.56□□□□□ -1.36
GEN1-202ENST00000381254 VTI1AQ96AJ9 217 aa6.56□□□□□ -1.36
GEN1-202ENST00000381254 RAB11FIP3O75154 756 aa6.56□□□□□ -1.36
GEN1-202ENST00000381254 RPS6KA4O75676 772 aa6.56□□□□□ -1.36
GEN1-202ENST00000381254 FMNL1O95466 1100 aaPredicted RBP6.55□□□□□ -1.36
GEN1-202ENST00000381254 CALRP27797 417 aaKnown RBP6.55□□□□□ -1.36
GEN1-202ENST00000381254 RRS1Q15050 365 aaKnown RBP6.55□□□□□ -1.36
GEN1-202ENST00000381254 ATF7IPQ6VMQ6 1270 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 TMEM87AQ8NBN3 555 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 SLC10A4Q96EP9 437 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 PRDM10Q9NQV6 1147 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 CTNNA3Q9UI47 895 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 MVPQ14764 893 aaKnown RBP6.55□□□□□ -1.36
GEN1-202ENST00000381254 TMC4Q7Z404 712 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 PYM1Q9BRP8 204 aaKnown RBP6.55□□□□□ -1.36
GEN1-202ENST00000381254 BRMS1Q9HCU9 246 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 C21orf2O43822 256 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 WDR78Q5VTH9 848 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 SASS6Q6UVJ0 657 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 SH2B1Q9NRF2 756 aaPredicted RBP6.55□□□□□ -1.36
GEN1-202ENST00000381254 CPLX1O14810 134 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 SART3Q15020 963 aaKnown RBP6.55□□□□□ -1.36
GEN1-202ENST00000381254 UVSSAQ2YD98 709 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 SUPT20HL1Q3ZLR7 823 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 MPNDQ8N594 471 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 ANKRD36BQ8N2N9 1353 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 CBFA2T2O43439 604 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 CDKL5O76039 1030 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 TNNT3P45378 269 aaPredicted RBP6.55□□□□□ -1.36
GEN1-202ENST00000381254 LBX1P52954 281 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 TNFAIP1Q13829 316 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 NFKBIBQ15653 356 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 CREBRFQ8IUR6 639 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 CDC5LQ99459 802 aaKnown RBP6.55□□□□□ -1.36
GEN1-202ENST00000381254 BABAM1Q9NWV8 329 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 COG6Q9Y2V7 657 aa6.55□□□□□ -1.36
GEN1-202ENST00000381254 PLXNC1O60486 1568 aa6.54□□□□□ -1.36
GEN1-202ENST00000381254 RRP9O43818 475 aaKnown RBP6.54□□□□□ -1.36
GEN1-202ENST00000381254 SLF2Q8IX21 1173 aa6.54□□□□□ -1.36
GEN1-202ENST00000381254 TUBBP07437 444 aa6.54□□□□□ -1.36
GEN1-202ENST00000381254 CDC37L1Q7L3B6 337 aa6.54□□□□□ -1.36
GEN1-202ENST00000381254 GBP3Q9H0R5 595 aa6.54□□□□□ -1.36
GEN1-202ENST00000381254 CREBZFQ9NS37 354 aa6.54□□□□□ -1.36
GEN1-202ENST00000381254 CTAGE5O15320 804 aa6.54□□□□□ -1.36
GEN1-202ENST00000381254 SLFN5Q08AF3 891 aa6.54□□□□□ -1.36
GEN1-202ENST00000381254 IREB2P48200 963 aaKnown RBP6.54□□□□□ -1.36
GEN1-202ENST00000381254 MTIF3Q9H2K0 278 aaKnown RBP6.54□□□□□ -1.36
GEN1-202ENST00000381254 C9orf78Q9NZ63 289 aaPredicted RBP6.54□□□□□ -1.36
GEN1-202ENST00000381254 UNC13BO14795 1591 aa6.54□□□□□ -1.36
GEN1-202ENST00000381254 CDC42BPGQ6DT37 1551 aa6.54□□□□□ -1.36
GEN1-202ENST00000381254 PABPC4Q13310 644 aaKnown RBP eCLIP6.54□□□□□ -1.36
GEN1-202ENST00000381254 DCTN1Q14203 1278 aa6.54□□□□□ -1.36
GEN1-202ENST00000381254 SKIV2LQ15477 1246 aaKnown RBP6.54□□□□□ -1.36
GEN1-202ENST00000381254 COL23A1Q86Y22 540 aaPredicted RBP6.54□□□□□ -1.36
GEN1-202ENST00000381254 WASF1Q92558 559 aa6.54□□□□□ -1.36
GEN1-202ENST00000381254 GLRX3O76003 335 aaKnown RBP6.53□□□□□ -1.36
GEN1-202ENST00000381254 GNAI2P04899 355 aa6.53□□□□□ -1.36
GEN1-202ENST00000381254 UBTFL1P0CB47 393 aaPredicted RBP6.53□□□□□ -1.36
GEN1-202ENST00000381254 HSP90B2PQ58FF3 399 aa6.53□□□□□ -1.36
GEN1-202ENST00000381254 UTP14AQ9BVJ6 771 aaKnown RBP6.53□□□□□ -1.36
GEN1-202ENST00000381254 TRMT112Q9UI30 125 aaKnown RBP6.53□□□□□ -1.36
GEN1-202ENST00000381254 CFAP45Q9UL16 551 aa6.53□□□□□ -1.36
GEN1-202ENST00000381254 CDC42BPBQ9Y5S2 1711 aa6.53□□□□□ -1.36
GEN1-202ENST00000381254 MARCH10Q8NA82 808 aaPredicted RBP6.53□□□□□ -1.36
GEN1-202ENST00000381254 NKX2-3Q8TAU0 364 aa6.53□□□□□ -1.36
GEN1-202ENST00000381254 VEZTQ9HBM0 779 aa6.53□□□□□ -1.36
GEN1-202ENST00000381254 IFT57Q9NWB7 429 aa6.53□□□□□ -1.36
GEN1-202ENST00000381254 CDC42BPAQ5VT25 1732 aa6.53□□□□□ -1.36
GEN1-202ENST00000381254 HMGB1P09429 215 aaKnown RBP6.53□□□□□ -1.36
GEN1-202ENST00000381254 ANAPC15P60006 121 aa6.53□□□□□ -1.36
GEN1-202ENST00000381254 AIMP1Q12904 312 aaKnown RBP6.53□□□□□ -1.36
GEN1-202ENST00000381254 IQCEQ6IPM2 695 aa6.53□□□□□ -1.36
GEN1-202ENST00000381254 SLC17A8Q8NDX2 589 aa6.53□□□□□ -1.36
GEN1-202ENST00000381254 RAET1EQ8TD07 263 aa6.53□□□□□ -1.36
GEN1-202ENST00000381254 DDX11Q96FC9 970 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms