RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 TCIRG1Q13488 830 aa13.5□□□□□ -0.25
FAM239A-201ENST00000381108 INTS5Q6P9B9 1019 aaKnown RBP13.5□□□□□ -0.25
FAM239A-201ENST00000381108 CCDC191Q8NCU4 936 aa13.5□□□□□ -0.25
FAM239A-201ENST00000381108 FBXO3Q9UK99 471 aa13.5□□□□□ -0.25
FAM239A-201ENST00000381108 CHMP3Q9Y3E7 222 aa13.5□□□□□ -0.25
FAM239A-201ENST00000381108 CASP7P55210 303 aa13.49□□□□□ -0.25
FAM239A-201ENST00000381108 TTC22Q5TAA0 569 aa13.49□□□□□ -0.25
FAM239A-201ENST00000381108 RHPN1Q8TCX5 695 aa13.49□□□□□ -0.25
FAM239A-201ENST00000381108 COL5A3P25940 1745 aaPredicted RBP13.49□□□□□ -0.25
FAM239A-201ENST00000381108 RAB11FIP3O75154 756 aa13.49□□□□□ -0.25
FAM239A-201ENST00000381108 GIGYF2Q6Y7W6 1299 aaKnown RBP13.49□□□□□ -0.25
FAM239A-201ENST00000381108 NUTM1Q86Y26 1132 aa13.49□□□□□ -0.25
FAM239A-201ENST00000381108 KIF1BPQ96EK5 621 aa13.49□□□□□ -0.25
FAM239A-201ENST00000381108 ISCA1Q9BUE6 129 aa13.49□□□□□ -0.25
FAM239A-201ENST00000381108 NUP98P52948 1817 aa13.49□□□□□ -0.25
FAM239A-201ENST00000381108 H7C1W4 665 aa13.48□□□□□ -0.25
FAM239A-201ENST00000381108 MX1P20591 662 aa13.48□□□□□ -0.25
FAM239A-201ENST00000381108 PDE1AP54750 535 aa13.48□□□□□ -0.25
FAM239A-201ENST00000381108 SBF2Q86WG5 1849 aa13.48□□□□□ -0.25
FAM239A-201ENST00000381108 CICQ96RK0 1608 aaPredicted RBP13.48□□□□□ -0.25
FAM239A-201ENST00000381108 ANKRD36CQ5JPF3 1778 aa13.48□□□□□ -0.25
FAM239A-201ENST00000381108 ONECUT3O60422 494 aaPredicted RBP13.48□□□□□ -0.25
FAM239A-201ENST00000381108 MFAP1P55081 439 aaKnown RBP13.48□□□□□ -0.25
FAM239A-201ENST00000381108 HSP90AB4PQ58FF6 505 aa13.48□□□□□ -0.25
FAM239A-201ENST00000381108 LINC00116Q8NCU8 138 aa13.48□□□□□ -0.25
FAM239A-201ENST00000381108 EIF5P55010 431 aaKnown RBP13.47□□□□□ -0.25
FAM239A-201ENST00000381108 LMBR1LQ6UX01 489 aa13.47□□□□□ -0.25
FAM239A-201ENST00000381108 FAM89AQ96GI7 184 aa13.47□□□□□ -0.25
FAM239A-201ENST00000381108 RREB1Q92766 1687 aa13.47□□□□□ -0.25
FAM239A-201ENST00000381108 BRWD3Q6RI45 1802 aa13.47□□□□□ -0.25
FAM239A-201ENST00000381108 UPF2Q9HAU5 1272 aaKnown RBP13.47□□□□□ -0.25
FAM239A-201ENST00000381108 ATF5Q9Y2D1 282 aaPredicted RBP13.47□□□□□ -0.25
FAM239A-201ENST00000381108 SALL3Q9BXA9 1300 aa13.46□□□□□ -0.25
FAM239A-201ENST00000381108 FOXO4P98177 505 aa13.46□□□□□ -0.25
FAM239A-201ENST00000381108 G3BP1Q13283 466 aaKnown RBP eCLIP13.46□□□□□ -0.25
FAM239A-201ENST00000381108 RABL6Q3YEC7 729 aaPredicted RBP13.46□□□□□ -0.25
FAM239A-201ENST00000381108 SDSP20132 328 aa13.45□□□□□ -0.26
FAM239A-201ENST00000381108 COL15A1P39059 1388 aa13.45□□□□□ -0.26
FAM239A-201ENST00000381108 TBC1D9Q6ZT07 1266 aa13.45□□□□□ -0.26
FAM239A-201ENST00000381108 SYNE4Q8N205 404 aa13.45□□□□□ -0.26
FAM239A-201ENST00000381108 CCDC85AQ96PX6 553 aaPredicted RBP13.45□□□□□ -0.26
FAM239A-201ENST00000381108 ZNF831Q5JPB2 1677 aa13.45□□□□□ -0.26
FAM239A-201ENST00000381108 HSP90AB3PQ58FF7 597 aa13.45□□□□□ -0.26
FAM239A-201ENST00000381108 SMIM5Q71RC9 77 aa13.45□□□□□ -0.26
FAM239A-201ENST00000381108 NLRP10Q86W26 655 aa13.45□□□□□ -0.26
FAM239A-201ENST00000381108 CCNL1Q9UK58 526 aaPredicted RBP13.45□□□□□ -0.26
FAM239A-201ENST00000381108 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.45□□□□□ -0.26
FAM239A-201ENST00000381108 UBN2Q6ZU65 1347 aa13.44□□□□□ -0.26
FAM239A-201ENST00000381108 FAM177BA6PVY3 158 aa13.44□□□□□ -0.26
FAM239A-201ENST00000381108 ERVV-1B6SEH8 477 aa13.44□□□□□ -0.26
FAM239A-201ENST00000381108 TRIM28Q13263 835 aaKnown RBP13.44□□□□□ -0.26
FAM239A-201ENST00000381108 ERC1Q8IUD2 1116 aa13.44□□□□□ -0.26
FAM239A-201ENST00000381108 CLASRPQ8N2M8 674 aaKnown RBP13.44□□□□□ -0.26
FAM239A-201ENST00000381108 OSBPL3Q9H4L5 887 aa13.44□□□□□ -0.26
FAM239A-201ENST00000381108 CDC45O75419 566 aa13.44□□□□□ -0.26
FAM239A-201ENST00000381108 SASH1O94885 1247 aa13.44□□□□□ -0.26
FAM239A-201ENST00000381108 RFX5P48382 616 aaPredicted RBP13.44□□□□□ -0.26
FAM239A-201ENST00000381108 PTPN12Q05209 780 aaKnown RBP13.44□□□□□ -0.26
FAM239A-201ENST00000381108 ZBTB38Q8NAP3 1195 aaPredicted RBP13.44□□□□□ -0.26
FAM239A-201ENST00000381108 PCCAP05165 728 aaPredicted RBP13.43□□□□□ -0.26
FAM239A-201ENST00000381108 AACSQ86V21 672 aa13.43□□□□□ -0.26
FAM239A-201ENST00000381108 TRMT112Q9UI30 125 aaKnown RBP13.43□□□□□ -0.26
FAM239A-201ENST00000381108 TUBGCP6Q96RT7 1819 aa13.43□□□□□ -0.26
FAM239A-201ENST00000381108 TRIM6-TRIM34B2RNG4 842 aa13.42□□□□□ -0.26
FAM239A-201ENST00000381108 CAMTA2O94983 1202 aa13.42□□□□□ -0.26
FAM239A-201ENST00000381108 KRT27Q7Z3Y8 459 aa13.42□□□□□ -0.26
FAM239A-201ENST00000381108 COPRSQ9NQ92 184 aa13.42□□□□□ -0.26
FAM239A-201ENST00000381108 LY75O60449 1722 aa13.42□□□□□ -0.26
FAM239A-201ENST00000381108 MAP4K4O95819 1239 aaPredicted RBP13.42□□□□□ -0.26
FAM239A-201ENST00000381108 IFIT2P09913 472 aaKnown RBP13.42□□□□□ -0.26
FAM239A-201ENST00000381108 RILPL2Q969X0 211 aa13.42□□□□□ -0.26
FAM239A-201ENST00000381108 STAP2Q9UGK3 403 aa13.42□□□□□ -0.26
FAM239A-201ENST00000381108 GNPATO15228 680 aa13.41□□□□□ -0.26
FAM239A-201ENST00000381108 ZNF594Q96JF6 807 aaPredicted RBP13.41□□□□□ -0.26
FAM239A-201ENST00000381108 CCDC8Q9H0W5 538 aaPredicted RBP13.41□□□□□ -0.26
FAM239A-201ENST00000381108 CNTNAP4Q9C0A0 1308 aa13.41□□□□□ -0.26
FAM239A-201ENST00000381108 ZNF772Q68DY9 489 aaPredicted RBP13.41□□□□□ -0.26
FAM239A-201ENST00000381108 ZNF34Q8IZ26 560 aa13.41□□□□□ -0.26
FAM239A-201ENST00000381108 TBC1D32Q96NH3 1257 aa13.41□□□□□ -0.26
FAM239A-201ENST00000381108 BCORQ6W2J9 1755 aa13.4□□□□□ -0.26
FAM239A-201ENST00000381108 TRIM37O94972 964 aa13.4□□□□□ -0.26
FAM239A-201ENST00000381108 EAF2Q96CJ1 260 aaPredicted RBP13.4□□□□□ -0.26
FAM239A-201ENST00000381108 BCL11BQ9C0K0 894 aaPredicted RBP13.4□□□□□ -0.26
FAM239A-201ENST00000381108 TLR7Q9NYK1 1049 aaKnown RBP13.4□□□□□ -0.26
FAM239A-201ENST00000381108 NIP7Q9Y221 180 aaKnown RBP eCLIP13.4□□□□□ -0.26
FAM239A-201ENST00000381108 TAF1LQ8IZX4 1826 aa13.4□□□□□ -0.26
FAM239A-201ENST00000381108 MYH3P11055 1940 aa13.4□□□□□ -0.27
FAM239A-201ENST00000381108 IRS4O14654 1257 aaPredicted RBP13.39□□□□□ -0.27
FAM239A-201ENST00000381108 RBM6P78332 1123 aaKnown RBP13.39□□□□□ -0.27
FAM239A-201ENST00000381108 TFCP2Q12800 502 aa13.39□□□□□ -0.27
FAM239A-201ENST00000381108 CCDC57Q2TAC2 916 aa13.39□□□□□ -0.27
FAM239A-201ENST00000381108 SUSD4Q5VX71 490 aa13.39□□□□□ -0.27
FAM239A-201ENST00000381108 FAM196AQ6ZSG2 479 aa13.39□□□□□ -0.27
FAM239A-201ENST00000381108 PI4K2BQ8TCG2 481 aa13.39□□□□□ -0.27
FAM239A-201ENST00000381108 C22orf23Q9BZE7 217 aa13.39□□□□□ -0.27
FAM239A-201ENST00000381108 DAXXQ9UER7 740 aaPredicted RBP13.39□□□□□ -0.27
FAM239A-201ENST00000381108 AK9Q5TCS8 1911 aa13.39□□□□□ -0.27
FAM239A-201ENST00000381108 AOX1Q06278 1338 aa13.39□□□□□ -0.27
FAM239A-201ENST00000381108 CDHR2Q9BYE9 1310 aa13.39□□□□□ -0.27
FAM239A-201ENST00000381108 CASC1Q6TDU7 716 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms