RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 PDIA4P13667 645 aaKnown RBP19.51■□□□□ 0.71
VPS16-203ENST00000380469 PDIA6Q15084 440 aa19.51■□□□□ 0.71
VPS16-203ENST00000380469 RNF20Q5VTR2 975 aa19.51■□□□□ 0.71
VPS16-203ENST00000380469 MTMR6Q9Y217 621 aa19.51■□□□□ 0.71
VPS16-203ENST00000380469 KLHL34Q8N239 644 aa19.51■□□□□ 0.71
VPS16-203ENST00000380469 FSD1Q9BTV5 496 aa19.51■□□□□ 0.71
VPS16-203ENST00000380469 SIL1Q9H173 461 aa19.51■□□□□ 0.71
VPS16-203ENST00000380469 SIPA1L3O60292 1781 aaPredicted RBP19.5■□□□□ 0.71
VPS16-203ENST00000380469 ME3Q16798 604 aa19.5■□□□□ 0.71
VPS16-203ENST00000380469 ZNF790Q6PG37 636 aa19.5■□□□□ 0.71
VPS16-203ENST00000380469 KRT28Q7Z3Y7 464 aa19.5■□□□□ 0.71
VPS16-203ENST00000380469 SLC27A2O14975 620 aa19.5■□□□□ 0.71
VPS16-203ENST00000380469 IGKV5-2P06315 115 aa19.5■□□□□ 0.71
VPS16-203ENST00000380469 PRKCSHP14314 528 aaPredicted RBP19.5■□□□□ 0.71
VPS16-203ENST00000380469 UBE2Q2Q8WVN8 375 aa19.5■□□□□ 0.71
VPS16-203ENST00000380469 BOLA2Q9H3K6 86 aa19.5■□□□□ 0.71
VPS16-203ENST00000380469 SNRKQ9NRH2 765 aa19.5■□□□□ 0.71
VPS16-203ENST00000380469 R3HCC1Q9Y3T6 440 aaKnown RBP19.5■□□□□ 0.71
VPS16-203ENST00000380469 VPS37CA5D8V6 355 aaPredicted RBP19.49■□□□□ 0.71
VPS16-203ENST00000380469 DNM1Q05193 864 aaKnown RBP19.49■□□□□ 0.71
VPS16-203ENST00000380469 ANKRD1Q15327 319 aa19.49■□□□□ 0.71
VPS16-203ENST00000380469 DDX54Q8TDD1 881 aaKnown RBP19.49■□□□□ 0.71
VPS16-203ENST00000380469 RAPGEF4Q8WZA2 1011 aa19.49■□□□□ 0.71
VPS16-203ENST00000380469 LMTK3Q96Q04 1460 aa19.49■□□□□ 0.71
VPS16-203ENST00000380469 CAMTA1Q9Y6Y1 1673 aa19.49■□□□□ 0.71
VPS16-203ENST00000380469 MYL6BP14649 208 aa19.48■□□□□ 0.71
VPS16-203ENST00000380469 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.48■□□□□ 0.71
VPS16-203ENST00000380469 NEURL1BA8MQ27 555 aa19.48■□□□□ 0.71
VPS16-203ENST00000380469 NECAB1Q8N987 351 aa19.48■□□□□ 0.71
VPS16-203ENST00000380469 SLC52A2Q9HAB3 445 aa19.48■□□□□ 0.71
VPS16-203ENST00000380469 TLR7Q9NYK1 1049 aaKnown RBP19.48■□□□□ 0.71
VPS16-203ENST00000380469 TPCN1Q9ULQ1 816 aa19.48■□□□□ 0.71
VPS16-203ENST00000380469 SLC39A6Q13433 755 aa19.47■□□□□ 0.71
VPS16-203ENST00000380469 GCKRQ14397 625 aa19.47■□□□□ 0.71
VPS16-203ENST00000380469 LARP1BQ659C4 914 aaKnown RBP19.47■□□□□ 0.71
VPS16-203ENST00000380469 BLOC1S2Q6QNY1 142 aa19.47■□□□□ 0.71
VPS16-203ENST00000380469 XAGE3Q8WTP9 111 aa19.47■□□□□ 0.71
VPS16-203ENST00000380469 A0A0D9SFI3 127 aa19.46■□□□□ 0.71
VPS16-203ENST00000380469 PDCP20941 246 aa19.46■□□□□ 0.71
VPS16-203ENST00000380469 MYD88Q99836 296 aa19.46■□□□□ 0.71
VPS16-203ENST00000380469 METTL22Q9BUU2 404 aaPredicted RBP19.46■□□□□ 0.71
VPS16-203ENST00000380469 ERBB3P21860 1342 aa19.46■□□□□ 0.71
VPS16-203ENST00000380469 ZNF142P52746 1687 aaPredicted RBP19.46■□□□□ 0.71
VPS16-203ENST00000380469 HCLS1P14317 486 aaPredicted RBP19.46■□□□□ 0.71
VPS16-203ENST00000380469 COPS6Q7L5N1 327 aa19.46■□□□□ 0.71
VPS16-203ENST00000380469 ADAMTS7Q9UKP4 1686 aa19.46■□□□□ 0.71
VPS16-203ENST00000380469 KIAA2012Q0VF49 1180 aa19.45■□□□□ 0.7
VPS16-203ENST00000380469 ST3GAL1Q11201 340 aa19.45■□□□□ 0.7
VPS16-203ENST00000380469 KLHDC4Q8TBB5 520 aa19.45■□□□□ 0.7
VPS16-203ENST00000380469 ALDH8A1Q9H2A2 487 aaPredicted RBP19.45■□□□□ 0.7
VPS16-203ENST00000380469 NLRP2Q9NX02 1062 aa19.45■□□□□ 0.7
VPS16-203ENST00000380469 HMG20BQ9P0W2 317 aa19.45■□□□□ 0.7
VPS16-203ENST00000380469 USP25Q9UHP3 1055 aa19.45■□□□□ 0.7
VPS16-203ENST00000380469 NPHP4O75161 1426 aaPredicted RBP19.45■□□□□ 0.7
VPS16-203ENST00000380469 TATP17735 454 aaPredicted RBP19.45■□□□□ 0.7
VPS16-203ENST00000380469 ZC3H6P61129 1189 aaKnown RBP19.45■□□□□ 0.7
VPS16-203ENST00000380469 GLIPR1L2Q4G1C9 344 aa19.45■□□□□ 0.7
VPS16-203ENST00000380469 NFATC2IPQ8NCF5 419 aa19.45■□□□□ 0.7
VPS16-203ENST00000380469 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.45■□□□□ 0.7
VPS16-203ENST00000380469 NPHP3Q7Z494 1330 aa19.45■□□□□ 0.7
VPS16-203ENST00000380469 RPS6KB1P23443 525 aa19.44■□□□□ 0.7
VPS16-203ENST00000380469 DTNBO60941 627 aa19.43■□□□□ 0.7
VPS16-203ENST00000380469 ADCY5O95622 1261 aa19.43■□□□□ 0.7
VPS16-203ENST00000380469 ANKRD13DQ6ZTN6 518 aa19.43■□□□□ 0.7
VPS16-203ENST00000380469 MED23Q9ULK4 1368 aa19.43■□□□□ 0.7
VPS16-203ENST00000380469 KRT85P78386 507 aa19.43■□□□□ 0.7
VPS16-203ENST00000380469 GIMAP6Q6P9H5 292 aa19.43■□□□□ 0.7
VPS16-203ENST00000380469 COPRSQ9NQ92 184 aa19.43■□□□□ 0.7
VPS16-203ENST00000380469 PHKG2P15735 406 aa19.42■□□□□ 0.7
VPS16-203ENST00000380469 EPHA10Q5JZY3 1008 aa19.42■□□□□ 0.7
VPS16-203ENST00000380469 TRPM3Q9HCF6 1732 aaPredicted RBP19.42■□□□□ 0.7
VPS16-203ENST00000380469 KDM4AO75164 1064 aa19.42■□□□□ 0.7
VPS16-203ENST00000380469 TSGA10IPQ3SY00 556 aa19.42■□□□□ 0.7
VPS16-203ENST00000380469 PROSER2Q86WR7 435 aaPredicted RBP19.42■□□□□ 0.7
VPS16-203ENST00000380469 TTC5Q8N0Z6 440 aa19.42■□□□□ 0.7
VPS16-203ENST00000380469 RGPD5Q99666 1765 aa19.42■□□□□ 0.7
VPS16-203ENST00000380469 SNRPA1P09661 255 aaKnown RBP19.41■□□□□ 0.7
VPS16-203ENST00000380469 ATP5JP18859 108 aa19.41■□□□□ 0.7
VPS16-203ENST00000380469 KRT32Q14532 448 aa19.41■□□□□ 0.7
VPS16-203ENST00000380469 MRC1P22897 1456 aa19.41■□□□□ 0.7
VPS16-203ENST00000380469 ZNF589Q86UQ0 364 aaPredicted RBP19.41■□□□□ 0.7
VPS16-203ENST00000380469 IFNL2Q8IZJ0 200 aa19.41■□□□□ 0.7
VPS16-203ENST00000380469 ZNF496Q96IT1 587 aaPredicted RBP19.41■□□□□ 0.7
VPS16-203ENST00000380469 FUCA2Q9BTY2 467 aa19.41■□□□□ 0.7
VPS16-203ENST00000380469 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.41■□□□□ 0.74e-6■□□□□ 11.2
VPS16-203ENST00000380469 KDM6AO15550 1401 aaPredicted RBP19.41■□□□□ 0.7
VPS16-203ENST00000380469 TAF5LO75529 589 aa19.4■□□□□ 0.7
VPS16-203ENST00000380469 TRHP20396 242 aaPredicted RBP19.4■□□□□ 0.7
VPS16-203ENST00000380469 SCN11AQ9UI33 1791 aa19.4■□□□□ 0.7
VPS16-203ENST00000380469 C5P01031 1676 aa19.4■□□□□ 0.7
VPS16-203ENST00000380469 TNNI3KQ59H18 835 aa19.4■□□□□ 0.7
VPS16-203ENST00000380469 TCEANC2Q96MN5 208 aa19.4■□□□□ 0.7
VPS16-203ENST00000380469 FPGT-TNNI3KV9GXZ4 949 aa19.4■□□□□ 0.7
VPS16-203ENST00000380469 JCADQ9P266 1359 aa19.39■□□□□ 0.7
VPS16-203ENST00000380469 CCDC192P0DO97 292 aa19.39■□□□□ 0.69
VPS16-203ENST00000380469 TOB2Q14106 344 aaPredicted RBP19.39■□□□□ 0.69
VPS16-203ENST00000380469 CDC37L1Q7L3B6 337 aa19.39■□□□□ 0.69
VPS16-203ENST00000380469 FERMT3Q86UX7 667 aa19.39■□□□□ 0.69
VPS16-203ENST00000380469 ELP1O95163 1332 aa19.39■□□□□ 0.69
VPS16-203ENST00000380469 UQCRHLA0A096LP55 91 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms