RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 C6orf163Q5TEZ5 329 aa14.26□□□□□ -0.13
CHD3-203ENST00000380358 HLA-DOAP06340 250 aa14.26□□□□□ -0.13
CHD3-203ENST00000380358 MTERF4Q7Z6M4 381 aaKnown RBP14.26□□□□□ -0.13
CHD3-203ENST00000380358 MPHOSPH6Q99547 160 aaKnown RBP14.26□□□□□ -0.13
CHD3-203ENST00000380358 TCP11L1Q9NUJ3 509 aa14.26□□□□□ -0.13
CHD3-203ENST00000380358 UAP1Q16222 522 aaPredicted RBP14.26□□□□□ -0.13
CHD3-203ENST00000380358 AFAP1Q8N556 730 aa14.26□□□□□ -0.13
CHD3-203ENST00000380358 PPP6R1Q9UPN7 881 aa14.26□□□□□ -0.13
CHD3-203ENST00000380358 ERCC3P19447 782 aa14.25□□□□□ -0.13
CHD3-203ENST00000380358 KIAA0753Q2KHM9 967 aa14.25□□□□□ -0.13
CHD3-203ENST00000380358 PPP4R4Q6NUP7 873 aa14.25□□□□□ -0.13
CHD3-203ENST00000380358 DAAM2Q86T65 1068 aa14.25□□□□□ -0.13
CHD3-203ENST00000380358 VPS8Q8N3P4 1428 aa14.25□□□□□ -0.13
CHD3-203ENST00000380358 PPP1R21Q6ZMI0 780 aa14.25□□□□□ -0.13
CHD3-203ENST00000380358 PNISRQ8TF01 805 aaKnown RBP14.25□□□□□ -0.13
CHD3-203ENST00000380358 RNF34Q969K3 372 aa14.25□□□□□ -0.13
CHD3-203ENST00000380358 CRCPO75575 148 aa14.25□□□□□ -0.13
CHD3-203ENST00000380358 CCDC25Q86WR0 208 aa14.25□□□□□ -0.13
CHD3-203ENST00000380358 FSIP1Q8NA03 581 aa14.25□□□□□ -0.13
CHD3-203ENST00000380358 THEMISQ8N1K5 641 aaPredicted RBP14.24□□□□□ -0.13
CHD3-203ENST00000380358 TBC1D5Q92609 795 aa14.24□□□□□ -0.13
CHD3-203ENST00000380358 LRRC45Q96CN5 670 aa14.24□□□□□ -0.13
CHD3-203ENST00000380358 PLIN2Q99541 437 aa14.24□□□□□ -0.13
CHD3-203ENST00000380358 SELENOSQ9BQE4 189 aa14.24□□□□□ -0.13
CHD3-203ENST00000380358 EPSTI1Q96J88 318 aa14.24□□□□□ -0.13
CHD3-203ENST00000380358 TSPY3P0CV98 308 aa14.24□□□□□ -0.13
CHD3-203ENST00000380358 TSPY8P0CW00 308 aa14.24□□□□□ -0.13
CHD3-203ENST00000380358 PPP2R1AP30153 589 aa14.24□□□□□ -0.13
CHD3-203ENST00000380358 ZBTB16Q05516 673 aa14.24□□□□□ -0.13
CHD3-203ENST00000380358 SKAP1Q86WV1 359 aa14.24□□□□□ -0.13
CHD3-203ENST00000380358 SREK1Q8WXA9 508 aaKnown RBP14.24□□□□□ -0.13
CHD3-203ENST00000380358 NOD1Q9Y239 953 aa14.24□□□□□ -0.13
CHD3-203ENST00000380358 ST5P78524 1137 aa14.24□□□□□ -0.13
CHD3-203ENST00000380358 RRBP1Q9P2E9 1410 aaKnown RBP14.24□□□□□ -0.13
CHD3-203ENST00000380358 KRT32Q14532 448 aa14.24□□□□□ -0.13
CHD3-203ENST00000380358 TAF7Q15545 349 aaPredicted RBP14.24□□□□□ -0.13
CHD3-203ENST00000380358 RPUSD2Q8IZ73 545 aaKnown RBP14.24□□□□□ -0.13
CHD3-203ENST00000380358 LRRC2Q9BYS8 371 aa14.24□□□□□ -0.13
CHD3-203ENST00000380358 TTF1Q15361 905 aaPredicted RBP14.23□□□□□ -0.13
CHD3-203ENST00000380358 CCDC117Q8IWD4 279 aaPredicted RBP14.23□□□□□ -0.13
CHD3-203ENST00000380358 PSMD6Q15008 389 aa14.23□□□□□ -0.13
CHD3-203ENST00000380358 SBNO2Q9Y2G9 1366 aa14.23□□□□□ -0.13
CHD3-203ENST00000380358 SLF2Q8IX21 1173 aa14.23□□□□□ -0.13
CHD3-203ENST00000380358 PKNOX2Q96KN3 472 aa14.23□□□□□ -0.13
CHD3-203ENST00000380358 KCNA4P22459 653 aa14.23□□□□□ -0.13
CHD3-203ENST00000380358 FNBP4Q8N3X1 1017 aaPredicted RBP14.23□□□□□ -0.13
CHD3-203ENST00000380358 EXOC1Q9NV70 894 aa14.23□□□□□ -0.13
CHD3-203ENST00000380358 SMARCC1Q92922 1105 aaPredicted RBP14.23□□□□□ -0.13
CHD3-203ENST00000380358 TRIM47Q96LD4 638 aa14.23□□□□□ -0.13
CHD3-203ENST00000380358 DUSP27Q5VZP5 1158 aa14.22□□□□□ -0.13
CHD3-203ENST00000380358 KRT9P35527 623 aa14.22□□□□□ -0.13
CHD3-203ENST00000380358 UBA7P41226 1012 aa14.22□□□□□ -0.13
CHD3-203ENST00000380358 PPME1Q9Y570 386 aa14.22□□□□□ -0.13
CHD3-203ENST00000380358 ZSCAN12O43309 604 aa14.22□□□□□ -0.13
CHD3-203ENST00000380358 FOXO3O43524 673 aa14.22□□□□□ -0.13
CHD3-203ENST00000380358 SF3A3Q12874 501 aaKnown RBP eCLIP14.22□□□□□ -0.139e-16■■■■□ 23.7
CHD3-203ENST00000380358 C8orf37Q96NL8 207 aa14.22□□□□□ -0.13
CHD3-203ENST00000380358 EXOC5O00471 708 aa14.22□□□□□ -0.13
CHD3-203ENST00000380358 SEPT14Q6ZU15 432 aa14.22□□□□□ -0.13
CHD3-203ENST00000380358 ANO3Q9BYT9 981 aa14.22□□□□□ -0.13
CHD3-203ENST00000380358 TTLL3Q9Y4R7 772 aa14.22□□□□□ -0.13
CHD3-203ENST00000380358 NCBP1Q09161 790 aaKnown RBP14.21□□□□□ -0.13
CHD3-203ENST00000380358 DNAJC21Q5F1R6 531 aaKnown RBP14.21□□□□□ -0.13
CHD3-203ENST00000380358 NBPF6Q5VWK0 638 aa14.21□□□□□ -0.13
CHD3-203ENST00000380358 NBPF5PQ86XG9 351 aaPredicted RBP14.21□□□□□ -0.13
CHD3-203ENST00000380358 NBPF4Q96M43 638 aa14.21□□□□□ -0.13
CHD3-203ENST00000380358 TTC21AQ8NDW8 1320 aa14.21□□□□□ -0.13
CHD3-203ENST00000380358 CCDC196A0A1B0GTZ2 297 aa14.21□□□□□ -0.13
CHD3-203ENST00000380358 HGSO14964 777 aaPredicted RBP14.21□□□□□ -0.13
CHD3-203ENST00000380358 ZSCAN31Q96LW9 406 aaPredicted RBP14.21□□□□□ -0.13
CHD3-203ENST00000380358 ANO10Q9NW15 660 aa14.21□□□□□ -0.13
CHD3-203ENST00000380358 CHRNA2Q15822 529 aa14.21□□□□□ -0.13
CHD3-203ENST00000380358 RAB11FIP3O75154 756 aa14.21□□□□□ -0.14
CHD3-203ENST00000380358 FAM13AO94988 1023 aa14.21□□□□□ -0.14
CHD3-203ENST00000380358 TMEM57Q8N5G2 664 aa14.21□□□□□ -0.14
CHD3-203ENST00000380358 HYPKQ9NX55 129 aa14.21□□□□□ -0.14
CHD3-203ENST00000380358 LDHAL6AQ6ZMR3 332 aa14.2□□□□□ -0.14
CHD3-203ENST00000380358 TXNDC16Q9P2K2 825 aa14.2□□□□□ -0.14
CHD3-203ENST00000380358 ANAPC4Q9UJX5 808 aa14.2□□□□□ -0.14
CHD3-203ENST00000380358 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.2□□□□□ -0.14
CHD3-203ENST00000380358 CEP112Q8N8E3 955 aa14.2□□□□□ -0.14
CHD3-203ENST00000380358 CCT6BQ92526 530 aa14.2□□□□□ -0.14
CHD3-203ENST00000380358 CCDC114Q96M63 670 aa14.2□□□□□ -0.14
CHD3-203ENST00000380358 PPANQ9NQ55 473 aaKnown RBP14.2□□□□□ -0.14
CHD3-203ENST00000380358 STXBP4Q6ZWJ1 553 aa14.2□□□□□ -0.14
CHD3-203ENST00000380358 FAM169AQ9Y6X4 670 aa14.2□□□□□ -0.14
CHD3-203ENST00000380358 OGFOD1Q8N543 542 aa14.2□□□□□ -0.14
CHD3-203ENST00000380358 CAPZA3Q96KX2 299 aa14.2□□□□□ -0.14
CHD3-203ENST00000380358 GBP3Q9H0R5 595 aa14.2□□□□□ -0.14
CHD3-203ENST00000380358 USP16Q9Y5T5 823 aa14.2□□□□□ -0.14
CHD3-203ENST00000380358 NACA2Q9H009 215 aa14.2□□□□□ -0.14
CHD3-203ENST00000380358 GNL1P36915 607 aaPredicted RBP14.2□□□□□ -0.14
CHD3-203ENST00000380358 SPECC1LQ69YQ0 1117 aa14.2□□□□□ -0.14
CHD3-203ENST00000380358 NAA15Q9BXJ9 866 aaKnown RBP14.2□□□□□ -0.14
CHD3-203ENST00000380358 MYCP01106 439 aaPredicted RBP14.19□□□□□ -0.14
CHD3-203ENST00000380358 AMPD3Q01432 767 aa14.19□□□□□ -0.14
CHD3-203ENST00000380358 NBPF1Q3BBV0 1214 aa14.19□□□□□ -0.14
CHD3-203ENST00000380358 MAEAQ7L5Y9 396 aa14.19□□□□□ -0.14
CHD3-203ENST00000380358 KIF18AQ8NI77 898 aa14.19□□□□□ -0.14
CHD3-203ENST00000380358 RTEL1-TNFRSF6BF6WH68 1400 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms