RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 TXLNBQ8N3L3 684 aa4.84□□□□□ -1.63
BRCA2-201ENST00000380152 TSPYL6Q8N831 410 aa4.84□□□□□ -1.63
BRCA2-201ENST00000380152 DNAAF4Q8WXU2 420 aa4.84□□□□□ -1.63
BRCA2-201ENST00000380152 AIDAQ96BJ3 306 aa4.84□□□□□ -1.63
BRCA2-201ENST00000380152 INTS4Q96HW7 963 aaKnown RBP4.84□□□□□ -1.63
BRCA2-201ENST00000380152 ANKRD62A6NC57 917 aa4.84□□□□□ -1.63
BRCA2-201ENST00000380152 GOLGA6L9A6NEM1 432 aa4.84□□□□□ -1.63
BRCA2-201ENST00000380152 MATR3P43243 847 aaKnown RBP eCLIP4.84□□□□□ -1.63
BRCA2-201ENST00000380152 SPECC1Q5M775 1068 aa4.84□□□□□ -1.63
BRCA2-201ENST00000380152 ARHGAP45Q92619 1136 aa4.84□□□□□ -1.63
BRCA2-201ENST00000380152 LRP2BPQ9P2M1 347 aa4.84□□□□□ -1.63
BRCA2-201ENST00000380152 SYT10Q6XYQ8 523 aa4.84□□□□□ -1.63
BRCA2-201ENST00000380152 DDX46Q7L014 1031 aaKnown RBP4.84□□□□□ -1.63
BRCA2-201ENST00000380152 TICAM2Q86XR7 235 aa4.84□□□□□ -1.63
BRCA2-201ENST00000380152 NOS1P29475 1434 aa4.84□□□□□ -1.63
BRCA2-201ENST00000380152 CTAGE9A4FU28 777 aa4.84□□□□□ -1.63
BRCA2-201ENST00000380152 SPA17Q15506 151 aa4.84□□□□□ -1.63
BRCA2-201ENST00000380152 RUFY3Q7L099 469 aa4.84□□□□□ -1.63
BRCA2-201ENST00000380152 SYCP2Q9BX26 1530 aa4.84□□□□□ -1.63
BRCA2-201ENST00000380152 PHACTR2O75167 634 aa4.84□□□□□ -1.63
BRCA2-201ENST00000380152 CCDC150Q8NCX0 1101 aa4.84□□□□□ -1.63
BRCA2-201ENST00000380152 UBAC1Q9BSL1 405 aa4.84□□□□□ -1.63
BRCA2-201ENST00000380152 CEP126Q9P2H0 1117 aa4.84□□□□□ -1.63
BRCA2-201ENST00000380152 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.84□□□□□ -1.63
BRCA2-201ENST00000380152 TEX14Q8IWB6 1497 aa4.84□□□□□ -1.64
BRCA2-201ENST00000380152 VAMP4O75379 141 aa4.84□□□□□ -1.64
BRCA2-201ENST00000380152 KRT24Q2M2I5 525 aa4.84□□□□□ -1.64
BRCA2-201ENST00000380152 MRPL50Q8N5N7 158 aaKnown RBP4.84□□□□□ -1.64
BRCA2-201ENST00000380152 RSPH14Q9UHP6 348 aa4.84□□□□□ -1.64
BRCA2-201ENST00000380152 MARCKSP29966 332 aaPredicted RBP4.84□□□□□ -1.64
BRCA2-201ENST00000380152 FAM69CQ0P6D2 419 aa4.84□□□□□ -1.64
BRCA2-201ENST00000380152 GAS2L3Q86XJ1 694 aa4.84□□□□□ -1.64
BRCA2-201ENST00000380152 MICALL1Q8N3F8 863 aa4.84□□□□□ -1.64
BRCA2-201ENST00000380152 RBM8AQ9Y5S9 174 aaKnown RBP4.84□□□□□ -1.64
BRCA2-201ENST00000380152 ABCA5Q8WWZ7 1642 aa4.84□□□□□ -1.64
BRCA2-201ENST00000380152 ATP2B2Q01814 1243 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 CCDC178Q5BJE1 867 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 ZNF530Q6P9A1 599 aaPredicted RBP4.83□□□□□ -1.64
BRCA2-201ENST00000380152 RBM33Q96EV2 1170 aaKnown RBP4.83□□□□□ -1.64
BRCA2-201ENST00000380152 MPHOSPH8Q99549 860 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 NAPBQ9H115 298 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 LMBRD1Q9NUN5 540 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 SLC12A7Q9Y666 1083 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 DUOX2Q9NRD8 1548 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 TRIM21P19474 475 aaKnown RBP4.83□□□□□ -1.64
BRCA2-201ENST00000380152 CEP85Q6P2H3 762 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 Q6ZUG5 572 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 RHPN1Q8TCX5 695 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 LZTFL1Q9NQ48 299 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 A0A1B0GVL5 298 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 PTCD1O75127 700 aaKnown RBP4.83□□□□□ -1.64
BRCA2-201ENST00000380152 HAND2P61296 217 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 RNF187Q5TA31 235 aaPredicted RBP4.83□□□□□ -1.64
BRCA2-201ENST00000380152 MICU3Q86XE3 530 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 TARBP1Q13395 1621 aaKnown RBP4.83□□□□□ -1.64
BRCA2-201ENST00000380152 GOLGA8BA8MQT2 603 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 IVLP07476 585 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 SYKP43405 635 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 HLTFQ14527 1009 aaKnown RBP eCLIP4.83□□□□□ -1.646e-6■■■□□ 17.2
BRCA2-201ENST00000380152 MYD88Q99836 296 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 PUF60Q9UHX1 559 aaKnown RBP4.83□□□□□ -1.64
BRCA2-201ENST00000380152 DMRT2Q9Y5R5 561 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 MSH6P52701 1360 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 TDRD12Q587J7 1177 aaKnown RBP4.83□□□□□ -1.64
BRCA2-201ENST00000380152 LARP1Q6PKG0 1096 aaKnown RBP4.83□□□□□ -1.64
BRCA2-201ENST00000380152 SEPT11Q9NVA2 429 aaKnown RBP4.83□□□□□ -1.64
BRCA2-201ENST00000380152 RAB11FIP4Q86YS3 637 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 WASF1Q92558 559 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 ECHDC1Q9NTX5 307 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 BLMP54132 1417 aaPredicted RBP4.83□□□□□ -1.64
BRCA2-201ENST00000380152 GPT2Q8TD30 523 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 PIK3C2GO75747 1445 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 NSD2O96028 1365 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 SSRP1Q08945 709 aaKnown RBP4.83□□□□□ -1.64
BRCA2-201ENST00000380152 FAM173BQ6P4H8 233 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 MRC2Q9UBG0 1479 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 CCDC196A0A1B0GTZ2 297 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 LIG1P18858 919 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 PAFAH1B1P43034 410 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 AKAP2Q9Y2D5 859 aa4.83□□□□□ -1.64
BRCA2-201ENST00000380152 ATF3P18847 181 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 AFMP43652 599 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 BCL2L12Q9HB09 334 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 DBF4Q9UBU7 674 aaPredicted RBP4.82□□□□□ -1.64
BRCA2-201ENST00000380152 COL17A1Q9UMD9 1497 aaPredicted RBP4.82□□□□□ -1.64
BRCA2-201ENST00000380152 A0A087WZG4 1122 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 TATP17735 454 aaPredicted RBP4.82□□□□□ -1.64
BRCA2-201ENST00000380152 IFNKQ9P0W0 207 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 ANKRD36BQ8N2N9 1353 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 CHMLP26374 656 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 METAP2P50579 478 aaKnown RBP eCLIP4.82□□□□□ -1.64
BRCA2-201ENST00000380152 JARID2Q92833 1246 aaPredicted RBP4.82□□□□□ -1.64
BRCA2-201ENST00000380152 CHPF2Q9P2E5 772 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 RTL1A6NKG5 1358 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 IFIT3O14879 490 aaKnown RBP4.82□□□□□ -1.64
BRCA2-201ENST00000380152 CPA1P15085 419 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 CCDC102BQ68D86 513 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 KCNG4Q8TDN1 519 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 BRF1Q92994 677 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 CHAMP1Q96JM3 812 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms