RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 NEURL1BA8MQ27 555 aa14.58□□□□□ -0.07
RFC3-201ENST00000380071 F13A1P00488 732 aa14.58□□□□□ -0.07
RFC3-201ENST00000380071 ME3Q16798 604 aa14.58□□□□□ -0.07
RFC3-201ENST00000380071 CREB3L3Q68CJ9 461 aa14.58□□□□□ -0.07
RFC3-201ENST00000380071 LARP1Q6PKG0 1096 aaKnown RBP14.58□□□□□ -0.07
RFC3-201ENST00000380071 TMEM87AQ8NBN3 555 aa14.58□□□□□ -0.07
RFC3-201ENST00000380071 MYD88Q99836 296 aa14.58□□□□□ -0.07
RFC3-201ENST00000380071 NECAB1Q8N987 351 aa14.58□□□□□ -0.08
RFC3-201ENST00000380071 RAPGEF4Q8WZA2 1011 aa14.58□□□□□ -0.08
RFC3-201ENST00000380071 MAP4K1Q92918 833 aa14.58□□□□□ -0.08
RFC3-201ENST00000380071 TM6SF1Q9BZW5 370 aa14.58□□□□□ -0.08
RFC3-201ENST00000380071 USP16Q9Y5T5 823 aa14.58□□□□□ -0.08
RFC3-201ENST00000380071 A0A0D9SFI3 127 aa14.57□□□□□ -0.08
RFC3-201ENST00000380071 GCKRQ14397 625 aa14.57□□□□□ -0.08
RFC3-201ENST00000380071 ZNF496Q96IT1 587 aaPredicted RBP14.57□□□□□ -0.08
RFC3-201ENST00000380071 TRPM3Q9HCF6 1732 aaPredicted RBP14.57□□□□□ -0.08
RFC3-201ENST00000380071 ZNF142P52746 1687 aaPredicted RBP14.57□□□□□ -0.08
RFC3-201ENST00000380071 CAMTA1Q9Y6Y1 1673 aa14.57□□□□□ -0.08
RFC3-201ENST00000380071 NPHP3Q7Z494 1330 aa14.57□□□□□ -0.08
RFC3-201ENST00000380071 KDM6AO15550 1401 aaPredicted RBP14.57□□□□□ -0.08
RFC3-201ENST00000380071 PHKG2P15735 406 aa14.57□□□□□ -0.08
RFC3-201ENST00000380071 KCNJ4P48050 445 aa14.57□□□□□ -0.08
RFC3-201ENST00000380071 EDC3Q96F86 508 aaKnown RBP14.57□□□□□ -0.08
RFC3-201ENST00000380071 FIBPO43427 364 aa14.56□□□□□ -0.08
RFC3-201ENST00000380071 ZKSCAN1P17029 563 aaPredicted RBP14.56□□□□□ -0.08
RFC3-201ENST00000380071 TPCN1Q9ULQ1 816 aa14.56□□□□□ -0.08
RFC3-201ENST00000380071 MTMR6Q9Y217 621 aa14.56□□□□□ -0.08
RFC3-201ENST00000380071 TAF6LQ9Y6J9 622 aa14.56□□□□□ -0.08
RFC3-201ENST00000380071 SLC27A2O14975 620 aa14.56□□□□□ -0.08
RFC3-201ENST00000380071 NEXNQ0ZGT2 675 aa14.56□□□□□ -0.08
RFC3-201ENST00000380071 ZSCAN31Q96LW9 406 aaPredicted RBP14.56□□□□□ -0.08
RFC3-201ENST00000380071 TCEANC2Q96MN5 208 aa14.56□□□□□ -0.08
RFC3-201ENST00000380071 FSD1Q9BTV5 496 aa14.56□□□□□ -0.08
RFC3-201ENST00000380071 METTL22Q9BUU2 404 aaPredicted RBP14.56□□□□□ -0.08
RFC3-201ENST00000380071 OFD1O75665 1012 aa14.55□□□□□ -0.08
RFC3-201ENST00000380071 DNM1Q05193 864 aaKnown RBP14.55□□□□□ -0.08
RFC3-201ENST00000380071 C1orf167Q5SNV9 1468 aa14.55□□□□□ -0.08
RFC3-201ENST00000380071 ADAMTS7Q9UKP4 1686 aa14.55□□□□□ -0.08
RFC3-201ENST00000380071 PHF14O94880 888 aa14.55□□□□□ -0.08
RFC3-201ENST00000380071 TATP17735 454 aaPredicted RBP14.55□□□□□ -0.08
RFC3-201ENST00000380071 UBE2HP62256 183 aa14.55□□□□□ -0.08
RFC3-201ENST00000380071 ANKRD13DQ6ZTN6 518 aa14.55□□□□□ -0.08
RFC3-201ENST00000380071 LRP10Q7Z4F1 713 aa14.55□□□□□ -0.08
RFC3-201ENST00000380071 ZNF589Q86UQ0 364 aaPredicted RBP14.55□□□□□ -0.08
RFC3-201ENST00000380071 CABLES1Q8TDN4 633 aa14.55□□□□□ -0.08
RFC3-201ENST00000380071 SH2B1Q9NRF2 756 aaPredicted RBP14.55□□□□□ -0.08
RFC3-201ENST00000380071 C5P01031 1676 aa14.55□□□□□ -0.08
RFC3-201ENST00000380071 HIP1O00291 1037 aa14.54□□□□□ -0.08
RFC3-201ENST00000380071 CCDC183Q5T5S1 534 aa14.54□□□□□ -0.08
RFC3-201ENST00000380071 NDUFB9Q9Y6M9 179 aa14.54□□□□□ -0.08
RFC3-201ENST00000380071 C19orf44Q9H6X5 657 aa14.54□□□□□ -0.08
RFC3-201ENST00000380071 SNRKQ9NRH2 765 aa14.54□□□□□ -0.08
RFC3-201ENST00000380071 ZKSCAN5Q9Y2L8 839 aa14.54□□□□□ -0.08
RFC3-201ENST00000380071 VPS37CA5D8V6 355 aaPredicted RBP14.53□□□□□ -0.08
RFC3-201ENST00000380071 ZNF500O60304 480 aaPredicted RBP14.53□□□□□ -0.08
RFC3-201ENST00000380071 MEGF6O75095 1541 aa14.53□□□□□ -0.08
RFC3-201ENST00000380071 ATP5J2-PTCD1G3V325 749 aa14.53□□□□□ -0.08
RFC3-201ENST00000380071 PTCD1O75127 700 aaKnown RBP14.53□□□□□ -0.08
RFC3-201ENST00000380071 CHGBP05060 677 aa14.53□□□□□ -0.08
RFC3-201ENST00000380071 CSB-PGBD3P0DP91 1061 aa14.53□□□□□ -0.08
RFC3-201ENST00000380071 RFX5P48382 616 aaPredicted RBP14.53□□□□□ -0.08
RFC3-201ENST00000380071 CHRNA2Q15822 529 aa14.53□□□□□ -0.08
RFC3-201ENST00000380071 IFNL2Q8IZJ0 200 aa14.53□□□□□ -0.08
RFC3-201ENST00000380071 ATP6V1DQ9Y5K8 247 aa14.53□□□□□ -0.08
RFC3-201ENST00000380071 CYP27B1O15528 508 aa14.52□□□□□ -0.08
RFC3-201ENST00000380071 PTPN12Q05209 780 aaKnown RBP14.52□□□□□ -0.08
RFC3-201ENST00000380071 TFCP2Q12800 502 aa14.52□□□□□ -0.08
RFC3-201ENST00000380071 HSP90AA2PQ14568 343 aaPredicted RBP14.52□□□□□ -0.08
RFC3-201ENST00000380071 CCDC39Q9UFE4 941 aa14.52□□□□□ -0.08
RFC3-201ENST00000380071 DBNLQ9UJU6 430 aaKnown RBP14.52□□□□□ -0.08
RFC3-201ENST00000380071 SCN11AQ9UI33 1791 aa14.52□□□□□ -0.08
RFC3-201ENST00000380071 SNRPA1P09661 255 aaKnown RBP14.52□□□□□ -0.09
RFC3-201ENST00000380071 PSMA5P28066 241 aa14.52□□□□□ -0.09
RFC3-201ENST00000380071 MPNDQ8N594 471 aa14.52□□□□□ -0.09
RFC3-201ENST00000380071 MED23Q9ULK4 1368 aa14.51□□□□□ -0.09
RFC3-201ENST00000380071 HCLS1P14317 486 aaPredicted RBP14.51□□□□□ -0.09
RFC3-201ENST00000380071 LARP1BQ659C4 914 aaKnown RBP14.51□□□□□ -0.09
RFC3-201ENST00000380071 UBE3BQ7Z3V4 1068 aa14.51□□□□□ -0.09
RFC3-201ENST00000380071 TTC5Q8N0Z6 440 aa14.51□□□□□ -0.09
RFC3-201ENST00000380071 COPRSQ9NQ92 184 aa14.51□□□□□ -0.09
RFC3-201ENST00000380071 RRP9O43818 475 aaKnown RBP14.51□□□□□ -0.09
RFC3-201ENST00000380071 TAF5LO75529 589 aa14.51□□□□□ -0.09
RFC3-201ENST00000380071 TNNI3KQ59H18 835 aa14.51□□□□□ -0.09
RFC3-201ENST00000380071 FAM173BQ6P4H8 233 aa14.51□□□□□ -0.09
RFC3-201ENST00000380071 GIMAP6Q6P9H5 292 aa14.51□□□□□ -0.09
RFC3-201ENST00000380071 BLOC1S2Q6QNY1 142 aa14.51□□□□□ -0.09
RFC3-201ENST00000380071 FPGT-TNNI3KV9GXZ4 949 aa14.51□□□□□ -0.09
RFC3-201ENST00000380071 LMTK3Q96Q04 1460 aa14.5□□□□□ -0.09
RFC3-201ENST00000380071 RPS6KB1P23443 525 aa14.5□□□□□ -0.09
RFC3-201ENST00000380071 TOB2Q14106 344 aaPredicted RBP14.5□□□□□ -0.09
RFC3-201ENST00000380071 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.5□□□□□ -0.09
RFC3-201ENST00000380071 FERMT3Q86UX7 667 aa14.5□□□□□ -0.09
RFC3-201ENST00000380071 USP25Q9UHP3 1055 aa14.5□□□□□ -0.09
RFC3-201ENST00000380071 COL15A1P39059 1388 aa14.5□□□□□ -0.09
RFC3-201ENST00000380071 RNF20Q5VTR2 975 aa14.5□□□□□ -0.09
RFC3-201ENST00000380071 CDC37L1Q7L3B6 337 aa14.5□□□□□ -0.09
RFC3-201ENST00000380071 ALS2Q96Q42 1657 aa14.49□□□□□ -0.09
RFC3-201ENST00000380071 A0A087WZG4 1122 aa14.49□□□□□ -0.09
RFC3-201ENST00000380071 LETM1O95202 739 aaPredicted RBP14.49□□□□□ -0.09
RFC3-201ENST00000380071 PTMAP06454 111 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms