RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 CHMP5Q9NZZ3 219 aa17.97■□□□□ 0.47
RAB3IP-203ENST00000378809 ITGB4P16144 1822 aa17.97■□□□□ 0.47
RAB3IP-203ENST00000378809 SPATA31A5Q5VU36 1347 aa17.96■□□□□ 0.47
RAB3IP-203ENST00000378809 SPATA31A7Q8IWB4 1347 aa17.96■□□□□ 0.47
RAB3IP-203ENST00000378809 FOXO4P98177 505 aa17.96■□□□□ 0.47
RAB3IP-203ENST00000378809 SLC4A9Q96Q91 983 aa17.96■□□□□ 0.47
RAB3IP-203ENST00000378809 LRP6O75581 1613 aa17.96■□□□□ 0.47
RAB3IP-203ENST00000378809 NUP188Q5SRE5 1749 aa17.96■□□□□ 0.47
RAB3IP-203ENST00000378809 ST18O60284 1047 aa17.96■□□□□ 0.47
RAB3IP-203ENST00000378809 CYP19A1P11511 503 aaPredicted RBP17.96■□□□□ 0.47
RAB3IP-203ENST00000378809 TFCP2Q12800 502 aa17.96■□□□□ 0.47
RAB3IP-203ENST00000378809 TCIRG1Q13488 830 aa17.96■□□□□ 0.47
RAB3IP-203ENST00000378809 CWC27Q6UX04 472 aaKnown RBP17.96■□□□□ 0.47
RAB3IP-203ENST00000378809 DIAPH3Q9NSV4 1193 aa17.96■□□□□ 0.47
RAB3IP-203ENST00000378809 KAT6BQ8WYB5 2073 aa17.96■□□□□ 0.46
RAB3IP-203ENST00000378809 IL25Q9H293 177 aa17.95■□□□□ 0.46
RAB3IP-203ENST00000378809 NRAPQ86VF7 1730 aa17.95■□□□□ 0.46
RAB3IP-203ENST00000378809 C8orf37Q96NL8 207 aa17.94■□□□□ 0.46
RAB3IP-203ENST00000378809 ISCA1Q9BUE6 129 aa17.94■□□□□ 0.46
RAB3IP-203ENST00000378809 ZBTB1Q9Y2K1 713 aa17.94■□□□□ 0.46
RAB3IP-203ENST00000378809 WNK3Q9BYP7 1800 aa17.94■□□□□ 0.46
RAB3IP-203ENST00000378809 EVI5LQ96CN4 794 aa17.94■□□□□ 0.46
RAB3IP-203ENST00000378809 BOLA2Q9H3K6 86 aa17.94■□□□□ 0.46
RAB3IP-203ENST00000378809 MAP3K15Q6ZN16 1313 aa17.93■□□□□ 0.46
RAB3IP-203ENST00000378809 SGSM2O43147 1006 aa17.93■□□□□ 0.46
RAB3IP-203ENST00000378809 MARCH10Q8NA82 808 aaPredicted RBP17.93■□□□□ 0.46
RAB3IP-203ENST00000378809 TNNI3KQ59H18 835 aa17.93■□□□□ 0.46
RAB3IP-203ENST00000378809 KIAA1211Q6ZU35 1233 aa17.93■□□□□ 0.46
RAB3IP-203ENST00000378809 NGLY1Q96IV0 654 aa17.93■□□□□ 0.46
RAB3IP-203ENST00000378809 FPGT-TNNI3KV9GXZ4 949 aa17.93■□□□□ 0.46
RAB3IP-203ENST00000378809 DOT1LQ8TEK3 1739 aa17.92■□□□□ 0.46
RAB3IP-203ENST00000378809 GPTP24298 496 aa17.92■□□□□ 0.46
RAB3IP-203ENST00000378809 RUFY2Q8WXA3 655 aa17.92■□□□□ 0.46
RAB3IP-203ENST00000378809 FAM89AQ96GI7 184 aa17.92■□□□□ 0.46
RAB3IP-203ENST00000378809 PALD1Q9ULE6 856 aa17.92■□□□□ 0.46
RAB3IP-203ENST00000378809 SLIT2O94813 1529 aa17.92■□□□□ 0.46
RAB3IP-203ENST00000378809 HLFQ16534 295 aa17.91■□□□□ 0.46
RAB3IP-203ENST00000378809 GIGYF2Q6Y7W6 1299 aaKnown RBP17.91■□□□□ 0.46
RAB3IP-203ENST00000378809 BARGINQ6ZT62 677 aa17.91■□□□□ 0.46
RAB3IP-203ENST00000378809 FAM98CQ17RN3 349 aaKnown RBP17.91■□□□□ 0.46
RAB3IP-203ENST00000378809 DBNLQ9UJU6 430 aaKnown RBP17.91■□□□□ 0.46
RAB3IP-203ENST00000378809 TJP1Q07157 1748 aa17.9■□□□□ 0.46
RAB3IP-203ENST00000378809 NEK4P51957 841 aa17.9■□□□□ 0.46
RAB3IP-203ENST00000378809 ZNF594Q96JF6 807 aaPredicted RBP17.9■□□□□ 0.46
RAB3IP-203ENST00000378809 AK9Q5TCS8 1911 aa17.9■□□□□ 0.46
RAB3IP-203ENST00000378809 DEKP35659 375 aaKnown RBP17.89■□□□□ 0.46
RAB3IP-203ENST00000378809 ATP6V1AP38606 617 aa17.89■□□□□ 0.46
RAB3IP-203ENST00000378809 ANAPC15P60006 121 aa17.89■□□□□ 0.46
RAB3IP-203ENST00000378809 TRIM28Q13263 835 aaKnown RBP17.89■□□□□ 0.46
RAB3IP-203ENST00000378809 CCDC57Q2TAC2 916 aa17.89■□□□□ 0.46
RAB3IP-203ENST00000378809 HSP90AB3PQ58FF7 597 aa17.89■□□□□ 0.46
RAB3IP-203ENST00000378809 CCDC85AQ96PX6 553 aaPredicted RBP17.89■□□□□ 0.46
RAB3IP-203ENST00000378809 FSD1Q9BTV5 496 aa17.89■□□□□ 0.46
RAB3IP-203ENST00000378809 TBC1D2BQ9UPU7 963 aa17.89■□□□□ 0.46
RAB3IP-203ENST00000378809 PCCAP05165 728 aaPredicted RBP17.89■□□□□ 0.45
RAB3IP-203ENST00000378809 DZIP3Q86Y13 1208 aaKnown RBP17.89■□□□□ 0.45
RAB3IP-203ENST00000378809 RAD50Q92878 1312 aa17.89■□□□□ 0.45
RAB3IP-203ENST00000378809 IL6STP40189 918 aaPredicted RBP17.88■□□□□ 0.45
RAB3IP-203ENST00000378809 ZBTB38Q8NAP3 1195 aaPredicted RBP17.88■□□□□ 0.45
RAB3IP-203ENST00000378809 NEUROD6Q96NK8 337 aa17.88■□□□□ 0.45
RAB3IP-203ENST00000378809 DBNDD2Q9BQY9 259 aa17.88■□□□□ 0.45
RAB3IP-203ENST00000378809 EPB41L2O43491 1005 aaKnown RBP17.88■□□□□ 0.45
RAB3IP-203ENST00000378809 DDIT3P35638 169 aa17.88■□□□□ 0.45
RAB3IP-203ENST00000378809 IL15P40933 162 aaPredicted RBP17.88■□□□□ 0.45
RAB3IP-203ENST00000378809 ATG9AQ7Z3C6 839 aa17.88■□□□□ 0.45
RAB3IP-203ENST00000378809 NWD2Q9ULI1 1742 aa17.88■□□□□ 0.45
RAB3IP-203ENST00000378809 JCADQ9P266 1359 aa17.87■□□□□ 0.45
RAB3IP-203ENST00000378809 HIP1O00291 1037 aa17.87■□□□□ 0.45
RAB3IP-203ENST00000378809 HSPA4P34932 840 aa17.87■□□□□ 0.45
RAB3IP-203ENST00000378809 LRRC24Q50LG9 513 aa17.87■□□□□ 0.45
RAB3IP-203ENST00000378809 TAF7LQ5H9L4 462 aa17.87■□□□□ 0.45
RAB3IP-203ENST00000378809 NLRP10Q86W26 655 aa17.87■□□□□ 0.45
RAB3IP-203ENST00000378809 LSG1Q9H089 658 aaKnown RBP17.87■□□□□ 0.45
RAB3IP-203ENST00000378809 CIZ1Q9ULV3 898 aaPredicted RBP17.87■□□□□ 0.45
RAB3IP-203ENST00000378809 LOC102724428A0A0B4J2F2 783 aa17.86■□□□□ 0.45
RAB3IP-203ENST00000378809 EYA2O00167 538 aa17.86■□□□□ 0.45
RAB3IP-203ENST00000378809 SIK1P57059 783 aa17.86■□□□□ 0.45
RAB3IP-203ENST00000378809 DNAJC2Q99543 621 aaKnown RBP17.86■□□□□ 0.45
RAB3IP-203ENST00000378809 ATP5JP18859 108 aa17.86■□□□□ 0.45
RAB3IP-203ENST00000378809 FAM227BQ96M60 508 aa17.86■□□□□ 0.45
RAB3IP-203ENST00000378809 UPF3BQ9BZI7 483 aaKnown RBP17.86■□□□□ 0.45
RAB3IP-203ENST00000378809 CRKLP46109 303 aaKnown RBP17.85■□□□□ 0.45
RAB3IP-203ENST00000378809 NMIQ13287 307 aaPredicted RBP17.85■□□□□ 0.45
RAB3IP-203ENST00000378809 NOL8Q76FK4 1167 aaKnown RBP17.85■□□□□ 0.45
RAB3IP-203ENST00000378809 SYNE4Q8N205 404 aa17.85■□□□□ 0.45
RAB3IP-203ENST00000378809 EDC3Q96F86 508 aaKnown RBP17.85■□□□□ 0.45
RAB3IP-203ENST00000378809 CCDC87Q9NVE4 849 aa17.85■□□□□ 0.45
RAB3IP-203ENST00000378809 TRMT112Q9UI30 125 aaKnown RBP17.85■□□□□ 0.45
RAB3IP-203ENST00000378809 NDUFB9Q9Y6M9 179 aa17.85■□□□□ 0.45
RAB3IP-203ENST00000378809 PALLDQ8WX93 1383 aa17.85■□□□□ 0.45
RAB3IP-203ENST00000378809 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.85■□□□□ 0.45
RAB3IP-203ENST00000378809 KCNQ2O43526 872 aa17.84■□□□□ 0.45
RAB3IP-203ENST00000378809 VPS72Q15906 364 aa17.84■□□□□ 0.45
RAB3IP-203ENST00000378809 PUS3Q9BZE2 481 aaKnown RBP17.84■□□□□ 0.45
RAB3IP-203ENST00000378809 ERVV-1B6SEH8 477 aa17.84■□□□□ 0.45
RAB3IP-203ENST00000378809 TIMM10P62072 90 aa17.84■□□□□ 0.45
RAB3IP-203ENST00000378809 IFIT5Q13325 482 aaKnown RBP17.84■□□□□ 0.45
RAB3IP-203ENST00000378809 CIAO1O76071 339 aa17.83■□□□□ 0.45
RAB3IP-203ENST00000378809 MCM2P49736 904 aa17.83■□□□□ 0.45
RAB3IP-203ENST00000378809 INTS5Q6P9B9 1019 aaKnown RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms