RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 POLA2Q14181 598 aa26.24■■□□□ 1.79
RNF38-205ENST00000377877 ANKRD45Q5TZF3 282 aa26.24■■□□□ 1.79
RNF38-205ENST00000377877 HDAC5Q9UQL6 1122 aa26.24■■□□□ 1.79
RNF38-205ENST00000377877 NUCB1Q02818 461 aa26.23■■□□□ 1.79
RNF38-205ENST00000377877 SYNE4Q8N205 404 aa26.23■■□□□ 1.79
RNF38-205ENST00000377877 MTX1Q13505 466 aa26.22■■□□□ 1.79
RNF38-205ENST00000377877 ARHGEF1Q92888 912 aaKnown RBP26.22■■□□□ 1.79
RNF38-205ENST00000377877 UBN2Q6ZU65 1347 aa26.22■■□□□ 1.79
RNF38-205ENST00000377877 FAM89AQ96GI7 184 aa26.22■■□□□ 1.79
RNF38-205ENST00000377877 AK7Q96M32 723 aa26.21■■□□□ 1.79
RNF38-205ENST00000377877 SRP68Q9UHB9 627 aaKnown RBP26.21■■□□□ 1.79
RNF38-205ENST00000377877 EXOC6BQ9Y2D4 811 aa26.21■■□□□ 1.79
RNF38-205ENST00000377877 ANKRD36CQ5JPF3 1778 aa26.21■■□□□ 1.79
RNF38-205ENST00000377877 PDE4AP27815 886 aa26.2■■□□□ 1.79
RNF38-205ENST00000377877 LNPKQ9C0E8 428 aa26.2■■□□□ 1.79
RNF38-205ENST00000377877 BCL2L12Q9HB09 334 aa26.2■■□□□ 1.79
RNF38-205ENST00000377877 APBB1O00213 710 aa26.2■■□□□ 1.78
RNF38-205ENST00000377877 PHF14O94880 888 aa26.2■■□□□ 1.78
RNF38-205ENST00000377877 FOXO4P98177 505 aa26.2■■□□□ 1.78
RNF38-205ENST00000377877 CHD1LQ86WJ1 897 aa26.2■■□□□ 1.78
RNF38-205ENST00000377877 USPL1Q5W0Q7 1092 aa26.19■■□□□ 1.78
RNF38-205ENST00000377877 NARFQ9UHQ1 456 aa26.19■■□□□ 1.78
RNF38-205ENST00000377877 PCCAP05165 728 aaPredicted RBP26.18■■□□□ 1.78
RNF38-205ENST00000377877 ZBTB38Q8NAP3 1195 aaPredicted RBP26.18■■□□□ 1.78
RNF38-205ENST00000377877 TNS1Q9HBL0 1735 aaKnown RBP26.18■■□□□ 1.78
RNF38-205ENST00000377877 TRAPPC3LQ5T215 181 aa26.18■■□□□ 1.78
RNF38-205ENST00000377877 SUSD4Q5VX71 490 aa26.18■■□□□ 1.78
RNF38-205ENST00000377877 CLEC4GQ6UXB4 293 aa26.17■■□□□ 1.78
RNF38-205ENST00000377877 SMARCA5O60264 1052 aaPredicted RBP26.16■■□□□ 1.78
RNF38-205ENST00000377877 RABL6Q3YEC7 729 aaPredicted RBP26.16■■□□□ 1.78
RNF38-205ENST00000377877 TRMT112Q9UI30 125 aaKnown RBP26.16■■□□□ 1.78
RNF38-205ENST00000377877 NIP7Q9Y221 180 aaKnown RBP eCLIP26.16■■□□□ 1.78
RNF38-205ENST00000377877 FAM177BA6PVY3 158 aa26.16■■□□□ 1.78
RNF38-205ENST00000377877 BCL11AQ9H165 835 aa26.16■■□□□ 1.78
RNF38-205ENST00000377877 PA2G4Q9UQ80 394 aaKnown RBP26.16■■□□□ 1.78
RNF38-205ENST00000377877 BCORQ6W2J9 1755 aa26.16■■□□□ 1.78
RNF38-205ENST00000377877 SURF6O75683 361 aaKnown RBP26.15■■□□□ 1.78
RNF38-205ENST00000377877 LMBR1LQ6UX01 489 aa26.15■■□□□ 1.78
RNF38-205ENST00000377877 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.15■■□□□ 1.78
RNF38-205ENST00000377877 ZPR1O75312 459 aa26.15■■□□□ 1.78
RNF38-205ENST00000377877 UBR3Q6ZT12 1888 aa26.14■■□□□ 1.78
RNF38-205ENST00000377877 C16orf71Q8IYS4 520 aaPredicted RBP26.14■■□□□ 1.77
RNF38-205ENST00000377877 ZNF652Q9Y2D9 606 aa26.14■■□□□ 1.77
RNF38-205ENST00000377877 RFC4P35249 363 aa26.13■■□□□ 1.77
RNF38-205ENST00000377877 ANP32AP39687 249 aaKnown RBP26.13■■□□□ 1.77
RNF38-205ENST00000377877 TBC1D9BQ66K14 1250 aa26.13■■□□□ 1.77
RNF38-205ENST00000377877 KLHDC4Q8TBB5 520 aa26.13■■□□□ 1.77
RNF38-205ENST00000377877 NOP58Q9Y2X3 529 aaKnown RBP26.13■■□□□ 1.77
RNF38-205ENST00000377877 EN1Q05925 392 aaPredicted RBP26.13■■□□□ 1.77
RNF38-205ENST00000377877 BICDL1Q6ZP65 573 aa26.13■■□□□ 1.77
RNF38-205ENST00000377877 ZNF827Q17R98 1081 aa26.12■■□□□ 1.77
RNF38-205ENST00000377877 RFX5P48382 616 aaPredicted RBP26.11■■□□□ 1.77
RNF38-205ENST00000377877 USP42Q9H9J4 1324 aaKnown RBP26.11■■□□□ 1.77
RNF38-205ENST00000377877 EZH2Q15910 746 aaKnown RBP26.11■■□□□ 1.77
RNF38-205ENST00000377877 PARP10Q53GL7 1025 aa26.11■■□□□ 1.77
RNF38-205ENST00000377877 UTP14AQ9BVJ6 771 aaKnown RBP26.11■■□□□ 1.77
RNF38-205ENST00000377877 C4AP0C0L4 1744 aa26.11■■□□□ 1.77
RNF38-205ENST00000377877 CDHR2Q9BYE9 1310 aa26.1■■□□□ 1.77
RNF38-205ENST00000377877 IRS4O14654 1257 aaPredicted RBP26.1■■□□□ 1.77
RNF38-205ENST00000377877 AKT1S1Q96B36 256 aa26.1■■□□□ 1.77
RNF38-205ENST00000377877 CAMKK2Q96RR4 588 aa26.1■■□□□ 1.77
RNF38-205ENST00000377877 PLA2G12BQ9BX93 195 aa26.1■■□□□ 1.77
RNF38-205ENST00000377877 RGL2O15211 777 aa26.09■■□□□ 1.77
RNF38-205ENST00000377877 ADRA2BP18089 450 aa26.09■■□□□ 1.77
RNF38-205ENST00000377877 SCN7AQ01118 1682 aa26.09■■□□□ 1.77
RNF38-205ENST00000377877 NTSR2O95665 410 aa26.09■■□□□ 1.77
RNF38-205ENST00000377877 CHMP3Q9Y3E7 222 aa26.09■■□□□ 1.77
RNF38-205ENST00000377877 SSFA2P28290 1259 aa26.08■■□□□ 1.77
RNF38-205ENST00000377877 OTUD7AQ8TE49 926 aaPredicted RBP26.08■■□□□ 1.77
RNF38-205ENST00000377877 PTPN12Q05209 780 aaKnown RBP26.07■■□□□ 1.76
RNF38-205ENST00000377877 NUTM1Q86Y26 1132 aa26.07■■□□□ 1.76
RNF38-205ENST00000377877 CCDC85AQ96PX6 553 aaPredicted RBP26.07■■□□□ 1.76
RNF38-205ENST00000377877 LRRCC1Q9C099 1032 aa26.07■■□□□ 1.76
RNF38-205ENST00000377877 CSF1RP07333 972 aa26.07■■□□□ 1.76
RNF38-205ENST00000377877 HCLS1P14317 486 aaPredicted RBP26.07■■□□□ 1.76
RNF38-205ENST00000377877 SIL1Q9H173 461 aa26.07■■□□□ 1.76
RNF38-205ENST00000377877 RAB11FIP3O75154 756 aa26.06■■□□□ 1.76
RNF38-205ENST00000377877 TFCP2L1Q9NZI6 479 aa26.06■■□□□ 1.76
RNF38-205ENST00000377877 SH3TC1Q8TE82 1336 aa26.06■■□□□ 1.76
RNF38-205ENST00000377877 RHPN1Q8TCX5 695 aa26.06■■□□□ 1.76
RNF38-205ENST00000377877 IL1RAPL2Q9NP60 686 aa26.06■■□□□ 1.76
RNF38-205ENST00000377877 COPRSQ9NQ92 184 aa26.06■■□□□ 1.76
RNF38-205ENST00000377877 DEFB132Q7Z7B7 95 aa26.05■■□□□ 1.76
RNF38-205ENST00000377877 TTLL11Q8NHH1 800 aa26.05■■□□□ 1.76
RNF38-205ENST00000377877 SETDB2Q96T68 719 aa26.05■■□□□ 1.76
RNF38-205ENST00000377877 ZBTB47Q9UFB7 747 aaPredicted RBP26.05■■□□□ 1.76
RNF38-205ENST00000377877 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.04■■□□□ 1.76
RNF38-205ENST00000377877 PDE8AO60658 829 aa26.04■■□□□ 1.76
RNF38-205ENST00000377877 GYS1P13807 737 aa26.04■■□□□ 1.76
RNF38-205ENST00000377877 HMGB2P26583 209 aaKnown RBP26.04■■□□□ 1.76
RNF38-205ENST00000377877 PLEKHM2Q8IWE5 1019 aa26.04■■□□□ 1.76
RNF38-205ENST00000377877 ZNF594Q96JF6 807 aaPredicted RBP26.04■■□□□ 1.76
RNF38-205ENST00000377877 SASH1O94885 1247 aa26.03■■□□□ 1.76
RNF38-205ENST00000377877 OS9Q13438 667 aaPredicted RBP26.03■■□□□ 1.76
RNF38-205ENST00000377877 IPO9Q96P70 1041 aaKnown RBP26.03■■□□□ 1.76
RNF38-205ENST00000377877 RGPD3A6NKT7 1758 aaPredicted RBP26.02■■□□□ 1.76
RNF38-205ENST00000377877 RGPD4Q7Z3J3 1758 aa26.02■■□□□ 1.76
RNF38-205ENST00000377877 G3BP1Q13283 466 aaKnown RBP eCLIP26.02■■□□□ 1.76
RNF38-205ENST00000377877 FAM161AQ3B820 660 aa26.02■■□□□ 1.76
RNF38-205ENST00000377877 ERFEQ4G0M1 354 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms