RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 TLR7Q9NYK1 1049 aaKnown RBP15.48■□□□□ 0.07
CLCN6-206ENST00000376496 MAP3K15Q6ZN16 1313 aa15.48■□□□□ 0.07
CLCN6-206ENST00000376496 RFX5P48382 616 aaPredicted RBP15.48■□□□□ 0.07
CLCN6-206ENST00000376496 INTS5Q6P9B9 1019 aaKnown RBP15.48■□□□□ 0.07
CLCN6-206ENST00000376496 AACSQ86V21 672 aa15.48■□□□□ 0.07
CLCN6-206ENST00000376496 ISCA1Q9BUE6 129 aa15.48■□□□□ 0.07
CLCN6-206ENST00000376496 HSP90AB4PQ58FF6 505 aa15.47■□□□□ 0.07
CLCN6-206ENST00000376496 DZIP3Q86Y13 1208 aaKnown RBP15.47■□□□□ 0.07
CLCN6-206ENST00000376496 CCDC191Q8NCU4 936 aa15.47■□□□□ 0.07
CLCN6-206ENST00000376496 ZNF594Q96JF6 807 aaPredicted RBP15.47■□□□□ 0.07
CLCN6-206ENST00000376496 FAM177BA6PVY3 158 aa15.47■□□□□ 0.07
CLCN6-206ENST00000376496 PTPN12Q05209 780 aaKnown RBP15.47■□□□□ 0.07
CLCN6-206ENST00000376496 EAF2Q96CJ1 260 aaPredicted RBP15.47■□□□□ 0.07
CLCN6-206ENST00000376496 STAP2Q9UGK3 403 aa15.47■□□□□ 0.07
CLCN6-206ENST00000376496 CLASRPQ8N2M8 674 aaKnown RBP15.47■□□□□ 0.07
CLCN6-206ENST00000376496 PI4K2BQ8TCG2 481 aa15.47■□□□□ 0.07
CLCN6-206ENST00000376496 GJD4Q96KN9 370 aaPredicted RBP15.47■□□□□ 0.07
CLCN6-206ENST00000376496 RABL6Q3YEC7 729 aaPredicted RBP15.46■□□□□ 0.07
CLCN6-206ENST00000376496 DAXXQ9UER7 740 aaPredicted RBP15.46■□□□□ 0.07
CLCN6-206ENST00000376496 GIGYF2Q6Y7W6 1299 aaKnown RBP15.46■□□□□ 0.06
CLCN6-206ENST00000376496 CCDC87Q9NVE4 849 aa15.46■□□□□ 0.06
CLCN6-206ENST00000376496 EP400Q96L91 3159 aa15.45■□□□□ 0.06
CLCN6-206ENST00000376496 IFIT2P09913 472 aaKnown RBP15.45■□□□□ 0.06
CLCN6-206ENST00000376496 TFCP2Q12800 502 aa15.45■□□□□ 0.06
CLCN6-206ENST00000376496 MYH14Q7Z406 1995 aaKnown RBP15.45■□□□□ 0.06
CLCN6-206ENST00000376496 SPRYD3Q8NCJ5 442 aa15.44■□□□□ 0.06
CLCN6-206ENST00000376496 IL6STP40189 918 aaPredicted RBP15.44■□□□□ 0.06
CLCN6-206ENST00000376496 NLRP10Q86W26 655 aa15.44■□□□□ 0.06
CLCN6-206ENST00000376496 ERC1Q8IUD2 1116 aa15.44■□□□□ 0.06
CLCN6-206ENST00000376496 LINC00116Q8NCU8 138 aa15.44■□□□□ 0.06
CLCN6-206ENST00000376496 IL25Q9H293 177 aa15.44■□□□□ 0.06
CLCN6-206ENST00000376496 EIF5P55010 431 aaKnown RBP15.43■□□□□ 0.06
CLCN6-206ENST00000376496 COPRSQ9NQ92 184 aa15.43■□□□□ 0.06
CLCN6-206ENST00000376496 TUBGCP6Q96RT7 1819 aa15.43■□□□□ 0.06
CLCN6-206ENST00000376496 PUS3Q9BZE2 481 aaKnown RBP15.43■□□□□ 0.06
CLCN6-206ENST00000376496 UBN2Q6ZU65 1347 aa15.42■□□□□ 0.06
CLCN6-206ENST00000376496 LRRC24Q50LG9 513 aa15.42■□□□□ 0.06
CLCN6-206ENST00000376496 TBC1D2Q9BYX2 928 aa15.42■□□□□ 0.06
CLCN6-206ENST00000376496 SEPT12Q8IYM1 358 aa15.42■□□□□ 0.06
CLCN6-206ENST00000376496 KIF2CQ99661 725 aa15.42■□□□□ 0.06
CLCN6-206ENST00000376496 NDUFB9Q9Y6M9 179 aa15.42■□□□□ 0.06
CLCN6-206ENST00000376496 CHMLP26374 656 aa15.41■□□□□ 0.06
CLCN6-206ENST00000376496 RBM25P49756 843 aaKnown RBP15.41■□□□□ 0.06
CLCN6-206ENST00000376496 TRMT112Q9UI30 125 aaKnown RBP15.41■□□□□ 0.06
CLCN6-206ENST00000376496 CASC1Q6TDU7 716 aa15.41■□□□□ 0.06
CLCN6-206ENST00000376496 QTRT2Q9H974 415 aaKnown RBP15.41■□□□□ 0.06
CLCN6-206ENST00000376496 ECHDC1Q9NTX5 307 aa15.41■□□□□ 0.06
CLCN6-206ENST00000376496 NUP98P52948 1817 aa15.41■□□□□ 0.06
CLCN6-206ENST00000376496 SMARCC1Q92922 1105 aaPredicted RBP15.4■□□□□ 0.06
CLCN6-206ENST00000376496 PCCAP05165 728 aaPredicted RBP15.4■□□□□ 0.06
CLCN6-206ENST00000376496 ZBTB38Q8NAP3 1195 aaPredicted RBP15.4■□□□□ 0.06
CLCN6-206ENST00000376496 USP26Q9BXU7 913 aa15.4■□□□□ 0.06
CLCN6-206ENST00000376496 BOLA2Q9H3K6 86 aa15.4■□□□□ 0.06
CLCN6-206ENST00000376496 TRIM28Q13263 835 aaKnown RBP15.4■□□□□ 0.06
CLCN6-206ENST00000376496 NBR1Q14596 966 aa15.4■□□□□ 0.06
CLCN6-206ENST00000376496 ATG9AQ7Z3C6 839 aa15.4■□□□□ 0.06
CLCN6-206ENST00000376496 EDC3Q96F86 508 aaKnown RBP15.4■□□□□ 0.06
CLCN6-206ENST00000376496 THSD7AQ9UPZ6 1657 aa15.4■□□□□ 0.06
CLCN6-206ENST00000376496 COL15A1P39059 1388 aa15.39■□□□□ 0.05
CLCN6-206ENST00000376496 TRPC5Q9UL62 973 aaPredicted RBP15.39■□□□□ 0.05
CLCN6-206ENST00000376496 AOX1Q06278 1338 aa15.39■□□□□ 0.05
CLCN6-206ENST00000376496 ERC2O15083 957 aa15.39■□□□□ 0.05
CLCN6-206ENST00000376496 ESYT1Q9BSJ8 1104 aa15.39■□□□□ 0.05
CLCN6-206ENST00000376496 SLKQ9H2G2 1235 aaPredicted RBP15.39■□□□□ 0.05
CLCN6-206ENST00000376496 DBNLQ9UJU6 430 aaKnown RBP15.39■□□□□ 0.05
CLCN6-206ENST00000376496 CD2BP2O95400 341 aaKnown RBP15.38■□□□□ 0.05
CLCN6-206ENST00000376496 TNNI3KQ59H18 835 aa15.38■□□□□ 0.05
CLCN6-206ENST00000376496 SUSD4Q5VX71 490 aa15.38■□□□□ 0.05
CLCN6-206ENST00000376496 DBNDD2Q9BQY9 259 aa15.38■□□□□ 0.05
CLCN6-206ENST00000376496 FPGT-TNNI3KV9GXZ4 949 aa15.38■□□□□ 0.05
CLCN6-206ENST00000376496 IRS4O14654 1257 aaPredicted RBP15.38■□□□□ 0.05
CLCN6-206ENST00000376496 GLRX3O76003 335 aaKnown RBP15.38■□□□□ 0.05
CLCN6-206ENST00000376496 CAMTA2O94983 1202 aa15.38■□□□□ 0.05
CLCN6-206ENST00000376496 HCLS1P14317 486 aaPredicted RBP15.38■□□□□ 0.05
CLCN6-206ENST00000376496 TIMM10P62072 90 aa15.38■□□□□ 0.05
CLCN6-206ENST00000376496 ANP32EQ9BTT0 268 aa15.38■□□□□ 0.05
CLCN6-206ENST00000376496 AMIGO3Q86WK7 504 aa15.37■□□□□ 0.05
CLCN6-206ENST00000376496 ZNF34Q8IZ26 560 aa15.37■□□□□ 0.05
CLCN6-206ENST00000376496 NEUROD6Q96NK8 337 aa15.37■□□□□ 0.05
CLCN6-206ENST00000376496 GREM2Q9H772 168 aa15.37■□□□□ 0.05
CLCN6-206ENST00000376496 TTC41PQ6P2S7 1318 aa15.37■□□□□ 0.05
CLCN6-206ENST00000376496 USP42Q9H9J4 1324 aaKnown RBP15.37■□□□□ 0.05
CLCN6-206ENST00000376496 BTAF1O14981 1849 aa15.37■□□□□ 0.05
CLCN6-206ENST00000376496 ERVV-1B6SEH8 477 aa15.37■□□□□ 0.05
CLCN6-206ENST00000376496 CCDC57Q2TAC2 916 aa15.37■□□□□ 0.05
CLCN6-206ENST00000376496 HSP90AB3PQ58FF7 597 aa15.37■□□□□ 0.05
CLCN6-206ENST00000376496 ANO2Q9NQ90 1003 aa15.37■□□□□ 0.05
CLCN6-206ENST00000376496 AK9Q5TCS8 1911 aa15.37■□□□□ 0.05
CLCN6-206ENST00000376496 ATRNO75882 1429 aa15.37■□□□□ 0.05
CLCN6-206ENST00000376496 BECN1Q14457 450 aa15.37■□□□□ 0.05
CLCN6-206ENST00000376496 CWC27Q6UX04 472 aaKnown RBP15.37■□□□□ 0.05
CLCN6-206ENST00000376496 BICDL1Q6ZP65 573 aa15.37■□□□□ 0.05
CLCN6-206ENST00000376496 CNTROBQ8N137 903 aa15.36■□□□□ 0.05
CLCN6-206ENST00000376496 GPATCH3Q96I76 525 aa15.36■□□□□ 0.05
CLCN6-206ENST00000376496 CCNL1Q9UK58 526 aaPredicted RBP15.36■□□□□ 0.05
CLCN6-206ENST00000376496 NIP7Q9Y221 180 aaKnown RBP eCLIP15.36■□□□□ 0.05
CLCN6-206ENST00000376496 EYA2O00167 538 aa15.35■□□□□ 0.05
CLCN6-206ENST00000376496 TAF7LQ5H9L4 462 aa15.35■□□□□ 0.05
CLCN6-206ENST00000376496 TTLL11Q8NHH1 800 aa15.35■□□□□ 0.05
CLCN6-206ENST00000376496 ANKRD36CQ5JPF3 1778 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms