RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 NOL8Q76FK4 1167 aaKnown RBP22.74■■□□□ 1.23
PPP1R3F-202ENST00000376188 NBPF15Q8N660 670 aa22.74■■□□□ 1.23
PPP1R3F-202ENST00000376188 TNS2Q63HR2 1409 aa22.74■■□□□ 1.23
PPP1R3F-202ENST00000376188 TTC14Q96N46 770 aa22.74■■□□□ 1.23
PPP1R3F-202ENST00000376188 ARXQ96QS3 562 aa22.74■■□□□ 1.23
PPP1R3F-202ENST00000376188 GRPEL1Q9HAV7 217 aa22.74■■□□□ 1.23
PPP1R3F-202ENST00000376188 TLR7Q9NYK1 1049 aaKnown RBP22.74■■□□□ 1.23
PPP1R3F-202ENST00000376188 ATP5J2-PTCD1G3V325 749 aa22.73■■□□□ 1.23
PPP1R3F-202ENST00000376188 PTCD1O75127 700 aaKnown RBP22.73■■□□□ 1.23
PPP1R3F-202ENST00000376188 BRD1O95696 1058 aa22.73■■□□□ 1.23
PPP1R3F-202ENST00000376188 CASP7P55210 303 aa22.73■■□□□ 1.23
PPP1R3F-202ENST00000376188 PTPN12Q05209 780 aaKnown RBP22.73■■□□□ 1.23
PPP1R3F-202ENST00000376188 RASEFQ8IZ41 740 aa22.73■■□□□ 1.23
PPP1R3F-202ENST00000376188 LMBRD1Q9NUN5 540 aa22.73■■□□□ 1.23
PPP1R3F-202ENST00000376188 SNRKQ9NRH2 765 aa22.73■■□□□ 1.23
PPP1R3F-202ENST00000376188 CCDC171Q6TFL3 1326 aa22.73■■□□□ 1.23
PPP1R3F-202ENST00000376188 TJP1Q07157 1748 aa22.73■■□□□ 1.23
PPP1R3F-202ENST00000376188 KCNB2Q92953 911 aa22.72■■□□□ 1.23
PPP1R3F-202ENST00000376188 EVA1CP58658 441 aa22.72■■□□□ 1.23
PPP1R3F-202ENST00000376188 TOGARAM1Q9Y4F4 1720 aa22.71■■□□□ 1.23
PPP1R3F-202ENST00000376188 BOLA2Q9H3K6 86 aa22.71■■□□□ 1.23
PPP1R3F-202ENST00000376188 STRN4Q9NRL3 753 aa22.71■■□□□ 1.23
PPP1R3F-202ENST00000376188 PTH1RQ03431 593 aa22.71■■□□□ 1.23
PPP1R3F-202ENST00000376188 TM6SF1Q9BZW5 370 aa22.71■■□□□ 1.23
PPP1R3F-202ENST00000376188 TNNI3KQ59H18 835 aa22.7■■□□□ 1.22
PPP1R3F-202ENST00000376188 DDX54Q8TDD1 881 aaKnown RBP22.7■■□□□ 1.22
PPP1R3F-202ENST00000376188 JARID2Q92833 1246 aaPredicted RBP22.7■■□□□ 1.22
PPP1R3F-202ENST00000376188 FSD1Q9BTV5 496 aa22.7■■□□□ 1.22
PPP1R3F-202ENST00000376188 FPGT-TNNI3KV9GXZ4 949 aa22.7■■□□□ 1.22
PPP1R3F-202ENST00000376188 H7C1W4 665 aa22.7■■□□□ 1.22
PPP1R3F-202ENST00000376188 NMIQ13287 307 aaPredicted RBP22.7■■□□□ 1.22
PPP1R3F-202ENST00000376188 CWC25Q9NXE8 425 aaPredicted RBP22.7■■□□□ 1.22
PPP1R3F-202ENST00000376188 AK2P54819 239 aa22.69■■□□□ 1.22
PPP1R3F-202ENST00000376188 LIMCH1Q9UPQ0 1083 aa22.69■■□□□ 1.22
PPP1R3F-202ENST00000376188 ZKSCAN1P17029 563 aaPredicted RBP22.69■■□□□ 1.22
PPP1R3F-202ENST00000376188 ATP5JP18859 108 aa22.69■■□□□ 1.22
PPP1R3F-202ENST00000376188 CASTP20810 708 aaKnown RBP22.69■■□□□ 1.22
PPP1R3F-202ENST00000376188 NECTIN1Q15223 517 aa22.68■■□□□ 1.22
PPP1R3F-202ENST00000376188 PRPF40BQ6NWY9 871 aaKnown RBP22.68■■□□□ 1.22
PPP1R3F-202ENST00000376188 TTLL7Q6ZT98 887 aa22.68■■□□□ 1.22
PPP1R3F-202ENST00000376188 KDM4FA0A1W2PPD8 638 aa22.68■■□□□ 1.22
PPP1R3F-202ENST00000376188 TFCP2Q12800 502 aa22.68■■□□□ 1.22
PPP1R3F-202ENST00000376188 MAP4K1Q92918 833 aa22.68■■□□□ 1.22
PPP1R3F-202ENST00000376188 FAM227BQ96M60 508 aa22.68■■□□□ 1.22
PPP1R3F-202ENST00000376188 DBNLQ9UJU6 430 aaKnown RBP22.68■■□□□ 1.22
PPP1R3F-202ENST00000376188 RFX7Q2KHR2 1363 aa22.68■■□□□ 1.22
PPP1R3F-202ENST00000376188 VPS53Q5VIR6 699 aa22.67■■□□□ 1.22
PPP1R3F-202ENST00000376188 MED23Q9ULK4 1368 aa22.67■■□□□ 1.22
PPP1R3F-202ENST00000376188 PRPF40AO75400 957 aaKnown RBP22.67■■□□□ 1.22
PPP1R3F-202ENST00000376188 A1BGP04217 495 aa22.67■■□□□ 1.22
PPP1R3F-202ENST00000376188 LMBR1LQ6UX01 489 aa22.67■■□□□ 1.22
PPP1R3F-202ENST00000376188 CCDC191Q8NCU4 936 aa22.67■■□□□ 1.22
PPP1R3F-202ENST00000376188 FOXO4P98177 505 aa22.66■■□□□ 1.22
PPP1R3F-202ENST00000376188 GAS2L3Q86XJ1 694 aa22.66■■□□□ 1.22
PPP1R3F-202ENST00000376188 JAKMIP1Q96N16 626 aaKnown RBP22.66■■□□□ 1.22
PPP1R3F-202ENST00000376188 PANK2Q9BZ23 570 aa22.66■■□□□ 1.22
PPP1R3F-202ENST00000376188 ZSWIM6Q9HCJ5 1215 aa22.66■■□□□ 1.22
PPP1R3F-202ENST00000376188 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.66■■□□□ 1.22
PPP1R3F-202ENST00000376188 RBM8AQ9Y5S9 174 aaKnown RBP22.66■■□□□ 1.22
PPP1R3F-202ENST00000376188 CYP46A1Q9Y6A2 500 aa22.66■■□□□ 1.22
PPP1R3F-202ENST00000376188 WDR33Q9C0J8 1336 aaKnown RBP22.66■■□□□ 1.22
PPP1R3F-202ENST00000376188 KCNJ4P48050 445 aa22.66■■□□□ 1.22
PPP1R3F-202ENST00000376188 RUFY3Q7L099 469 aa22.66■■□□□ 1.22
PPP1R3F-202ENST00000376188 RTN4Q9NQC3 1192 aaKnown RBP22.65■■□□□ 1.22
PPP1R3F-202ENST00000376188 TMOD3Q9NYL9 352 aa22.65■■□□□ 1.22
PPP1R3F-202ENST00000376188 A0A0D9SFI3 127 aa22.65■■□□□ 1.22
PPP1R3F-202ENST00000376188 JCADQ9P266 1359 aa22.64■■□□□ 1.22
PPP1R3F-202ENST00000376188 ZNF445P59923 1031 aa22.64■■□□□ 1.21
PPP1R3F-202ENST00000376188 RNF20Q5VTR2 975 aa22.64■■□□□ 1.21
PPP1R3F-202ENST00000376188 CREB3L3Q68CJ9 461 aa22.64■■□□□ 1.21
PPP1R3F-202ENST00000376188 FAM43AQ8N2R8 423 aa22.64■■□□□ 1.21
PPP1R3F-202ENST00000376188 PDRG1Q9NUG6 133 aa22.64■■□□□ 1.21
PPP1R3F-202ENST00000376188 ZSCAN31Q96LW9 406 aaPredicted RBP22.63■■□□□ 1.21
PPP1R3F-202ENST00000376188 ITGB4P16144 1822 aa22.63■■□□□ 1.21
PPP1R3F-202ENST00000376188 NCLP19338 710 aaKnown RBP22.63■■□□□ 1.21
PPP1R3F-202ENST00000376188 PSMA5P28066 241 aa22.63■■□□□ 1.21
PPP1R3F-202ENST00000376188 ADCK5Q3MIX3 580 aa22.63■■□□□ 1.21
PPP1R3F-202ENST00000376188 FOXD4L5Q5VV16 416 aaPredicted RBP22.63■■□□□ 1.21
PPP1R3F-202ENST00000376188 CAVIN1Q6NZI2 390 aaKnown RBP22.63■■□□□ 1.21
PPP1R3F-202ENST00000376188 FOXD4L4Q8WXT5 416 aaPredicted RBP22.63■■□□□ 1.21
PPP1R3F-202ENST00000376188 SH2B1Q9NRF2 756 aaPredicted RBP22.63■■□□□ 1.21
PPP1R3F-202ENST00000376188 CHMP3Q9Y3E7 222 aa22.63■■□□□ 1.21
PPP1R3F-202ENST00000376188 MBD3O95983 291 aa22.62■■□□□ 1.21
PPP1R3F-202ENST00000376188 TEX13AQ9BXU3 409 aaPredicted RBP22.62■■□□□ 1.21
PPP1R3F-202ENST00000376188 ZBTB3Q9H5J0 574 aa22.62■■□□□ 1.21
PPP1R3F-202ENST00000376188 RPAP1Q9BWH6 1393 aaPredicted RBP22.62■■□□□ 1.21
PPP1R3F-202ENST00000376188 GPR108Q9NPR9 543 aa22.62■■□□□ 1.21
PPP1R3F-202ENST00000376188 COL14A1Q05707 1796 aaKnown RBP22.61■■□□□ 1.21
PPP1R3F-202ENST00000376188 VSIG10Q8N0Z9 540 aa22.61■■□□□ 1.21
PPP1R3F-202ENST00000376188 TCHHQ07283 1943 aa22.61■■□□□ 1.21
PPP1R3F-202ENST00000376188 DBNDD2Q9BQY9 259 aa22.61■■□□□ 1.21
PPP1R3F-202ENST00000376188 HMG20BQ9P0W2 317 aa22.61■■□□□ 1.21
PPP1R3F-202ENST00000376188 SLC27A2O14975 620 aa22.6■■□□□ 1.21
PPP1R3F-202ENST00000376188 GPT2Q8TD30 523 aa22.6■■□□□ 1.21
PPP1R3F-202ENST00000376188 HAUS7Q99871 368 aa22.6■■□□□ 1.21
PPP1R3F-202ENST00000376188 ATG3Q9NT62 314 aa22.6■■□□□ 1.21
PPP1R3F-202ENST00000376188 CPA1P15085 419 aa22.6■■□□□ 1.21
PPP1R3F-202ENST00000376188 IL15P40933 162 aaPredicted RBP22.6■■□□□ 1.21
PPP1R3F-202ENST00000376188 ZSCAN23Q3MJ62 389 aa22.6■■□□□ 1.21
PPP1R3F-202ENST00000376188 SMC3Q9UQE7 1217 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms