RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 NBPF15Q8N660 670 aa16.89■□□□□ 0.29
MSH5-202ENST00000375740 PLBD2Q8NHP8 589 aa16.89■□□□□ 0.29
MSH5-202ENST00000375740 LSG1Q9H089 658 aaKnown RBP16.89■□□□□ 0.29
MSH5-202ENST00000375740 BAG4O95429 457 aaKnown RBP16.88■□□□□ 0.29
MSH5-202ENST00000375740 NASPP49321 788 aaPredicted RBP16.88■□□□□ 0.29
MSH5-202ENST00000375740 NKX1-1Q15270 411 aaPredicted RBP16.88■□□□□ 0.29
MSH5-202ENST00000375740 GLI3P10071 1580 aa16.88■□□□□ 0.29
MSH5-202ENST00000375740 PPP1R9BQ96SB3 815 aa16.88■□□□□ 0.29
MSH5-202ENST00000375740 UPF3BQ9BZI7 483 aaKnown RBP16.88■□□□□ 0.29
MSH5-202ENST00000375740 R3HCC1Q9Y3T6 440 aaKnown RBP16.88■□□□□ 0.29
MSH5-202ENST00000375740 RAD50Q92878 1312 aa16.87■□□□□ 0.29
MSH5-202ENST00000375740 UBE3BQ7Z3V4 1068 aa16.87■□□□□ 0.29
MSH5-202ENST00000375740 DIAPH3Q9NSV4 1193 aa16.87■□□□□ 0.29
MSH5-202ENST00000375740 AFDNP55196 1824 aaKnown RBP16.87■□□□□ 0.29
MSH5-202ENST00000375740 A0A087WZG4 1122 aa16.87■□□□□ 0.29
MSH5-202ENST00000375740 CCDC173Q0VFZ6 552 aa16.87■□□□□ 0.29
MSH5-202ENST00000375740 NOL8Q76FK4 1167 aaKnown RBP16.87■□□□□ 0.29
MSH5-202ENST00000375740 TLR7Q9NYK1 1049 aaKnown RBP16.87■□□□□ 0.29
MSH5-202ENST00000375740 LAMB4A4D0S4 1761 aa16.87■□□□□ 0.29
MSH5-202ENST00000375740 ARFGEF2Q9Y6D5 1785 aa16.87■□□□□ 0.29
MSH5-202ENST00000375740 PTMSP20962 102 aa16.86■□□□□ 0.29
MSH5-202ENST00000375740 EVI5LQ96CN4 794 aa16.86■□□□□ 0.29
MSH5-202ENST00000375740 ABCA3Q99758 1704 aa16.86■□□□□ 0.29
MSH5-202ENST00000375740 SKOR2Q2VWA4 1001 aaPredicted RBP16.86■□□□□ 0.29
MSH5-202ENST00000375740 RUFY2Q8WXA3 655 aa16.86■□□□□ 0.29
MSH5-202ENST00000375740 A1BGP04217 495 aa16.85■□□□□ 0.29
MSH5-202ENST00000375740 RFX5P48382 616 aaPredicted RBP16.85■□□□□ 0.29
MSH5-202ENST00000375740 SNX14Q9Y5W7 946 aa16.85■□□□□ 0.29
MSH5-202ENST00000375740 GOLGA6L22H0YM25 854 aa16.85■□□□□ 0.29
MSH5-202ENST00000375740 CUL4AQ13619 759 aa16.85■□□□□ 0.29
MSH5-202ENST00000375740 COPRSQ9NQ92 184 aa16.85■□□□□ 0.29
MSH5-202ENST00000375740 ZDHHC9Q9Y397 364 aa16.85■□□□□ 0.29
MSH5-202ENST00000375740 RABL6Q3YEC7 729 aaPredicted RBP16.84■□□□□ 0.29
MSH5-202ENST00000375740 TTLL7Q6ZT98 887 aa16.84■□□□□ 0.29
MSH5-202ENST00000375740 MSNP26038 577 aaKnown RBP16.84■□□□□ 0.29
MSH5-202ENST00000375740 CASP7P55210 303 aa16.84■□□□□ 0.29
MSH5-202ENST00000375740 PTPN12Q05209 780 aaKnown RBP16.84■□□□□ 0.29
MSH5-202ENST00000375740 RASEFQ8IZ41 740 aa16.84■□□□□ 0.29
MSH5-202ENST00000375740 BOLA2Q9H3K6 86 aa16.83■□□□□ 0.29
MSH5-202ENST00000375740 UBR2Q8IWV8 1755 aa16.83■□□□□ 0.28
MSH5-202ENST00000375740 PTH1RQ03431 593 aa16.83■□□□□ 0.28
MSH5-202ENST00000375740 MCTP1Q6DN14 999 aa16.83■□□□□ 0.28
MSH5-202ENST00000375740 KCPQ6ZWJ8 1503 aa16.82■□□□□ 0.28
MSH5-202ENST00000375740 SHANK3Q9BYB0 1731 aa16.82■□□□□ 0.28
MSH5-202ENST00000375740 COL15A1P39059 1388 aa16.82■□□□□ 0.28
MSH5-202ENST00000375740 H7C1W4 665 aa16.82■□□□□ 0.28
MSH5-202ENST00000375740 TFCP2Q12800 502 aa16.82■□□□□ 0.28
MSH5-202ENST00000375740 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.82■□□□□ 0.28
MSH5-202ENST00000375740 INTS4Q96HW7 963 aaKnown RBP16.81■□□□□ 0.28
MSH5-202ENST00000375740 A0A0U1RQG5 324 aaPredicted RBP16.81■□□□□ 0.28
MSH5-202ENST00000375740 LMBR1LQ6UX01 489 aa16.81■□□□□ 0.28
MSH5-202ENST00000375740 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.81■□□□□ 0.28
MSH5-202ENST00000375740 NHSL1Q5SYE7 1610 aa16.8■□□□□ 0.28
MSH5-202ENST00000375740 FOXO4P98177 505 aa16.8■□□□□ 0.28
MSH5-202ENST00000375740 FAM227BQ96M60 508 aa16.8■□□□□ 0.28
MSH5-202ENST00000375740 ZBTB3Q9H5J0 574 aa16.8■□□□□ 0.28
MSH5-202ENST00000375740 DDX49Q9Y6V7 483 aaKnown RBP16.8■□□□□ 0.28
MSH5-202ENST00000375740 PAPPAQ13219 1627 aa16.8■□□□□ 0.28
MSH5-202ENST00000375740 NMIQ13287 307 aaPredicted RBP16.8■□□□□ 0.28
MSH5-202ENST00000375740 TNNI3KQ59H18 835 aa16.8■□□□□ 0.28
MSH5-202ENST00000375740 CWC25Q9NXE8 425 aaPredicted RBP16.8■□□□□ 0.28
MSH5-202ENST00000375740 FPGT-TNNI3KV9GXZ4 949 aa16.8■□□□□ 0.28
MSH5-202ENST00000375740 HIP1O00291 1037 aa16.79■□□□□ 0.28
MSH5-202ENST00000375740 TTC14Q96N46 770 aa16.79■□□□□ 0.28
MSH5-202ENST00000375740 FOXD4L5Q5VV16 416 aaPredicted RBP16.79■□□□□ 0.28
MSH5-202ENST00000375740 PRPF40BQ6NWY9 871 aaKnown RBP16.79■□□□□ 0.28
MSH5-202ENST00000375740 FOXD4L4Q8WXT5 416 aaPredicted RBP16.79■□□□□ 0.28
MSH5-202ENST00000375740 FSD1Q9BTV5 496 aa16.79■□□□□ 0.28
MSH5-202ENST00000375740 BTG4Q9NY30 223 aa16.79■□□□□ 0.28
MSH5-202ENST00000375740 TMOD3Q9NYL9 352 aa16.79■□□□□ 0.28
MSH5-202ENST00000375740 DBNLQ9UJU6 430 aaKnown RBP16.79■□□□□ 0.28
MSH5-202ENST00000375740 PRDM10Q9NQV6 1147 aa16.78■□□□□ 0.28
MSH5-202ENST00000375740 LMBRD1Q9NUN5 540 aa16.78■□□□□ 0.28
MSH5-202ENST00000375740 CHMP3Q9Y3E7 222 aa16.78■□□□□ 0.28
MSH5-202ENST00000375740 TNS2Q63HR2 1409 aa16.78■□□□□ 0.28
MSH5-202ENST00000375740 UQCRHLA0A096LP55 91 aa16.78■□□□□ 0.28
MSH5-202ENST00000375740 UQCRHP07919 91 aa16.78■□□□□ 0.28
MSH5-202ENST00000375740 CPA1P15085 419 aa16.77■□□□□ 0.28
MSH5-202ENST00000375740 AK2P54819 239 aa16.77■□□□□ 0.28
MSH5-202ENST00000375740 NUP188Q5SRE5 1749 aa16.77■□□□□ 0.28
MSH5-202ENST00000375740 CCDC171Q6TFL3 1326 aa16.77■□□□□ 0.28
MSH5-202ENST00000375740 ATP5JP18859 108 aa16.77■□□□□ 0.27
MSH5-202ENST00000375740 CASTP20810 708 aaKnown RBP16.77■□□□□ 0.27
MSH5-202ENST00000375740 NECTIN1Q15223 517 aa16.77■□□□□ 0.27
MSH5-202ENST00000375740 KLHL40Q2TBA0 621 aa16.77■□□□□ 0.27
MSH5-202ENST00000375740 KCNB2Q92953 911 aa16.77■□□□□ 0.27
MSH5-202ENST00000375740 EDC3Q96F86 508 aaKnown RBP16.77■□□□□ 0.27
MSH5-202ENST00000375740 CHAMP1Q96JM3 812 aa16.77■□□□□ 0.27
MSH5-202ENST00000375740 LARP6Q9BRS8 491 aaKnown RBP16.77■□□□□ 0.27
MSH5-202ENST00000375740 A0A0D9SFI3 127 aa16.76■□□□□ 0.27
MSH5-202ENST00000375740 BRD1O95696 1058 aa16.76■□□□□ 0.27
MSH5-202ENST00000375740 ADCK5Q3MIX3 580 aa16.76■□□□□ 0.27
MSH5-202ENST00000375740 ANP32BQ92688 251 aaKnown RBP16.76■□□□□ 0.27
MSH5-202ENST00000375740 RBSNQ9H1K0 784 aa16.76■□□□□ 0.27
MSH5-202ENST00000375740 TOGARAM1Q9Y4F4 1720 aa16.76■□□□□ 0.27
MSH5-202ENST00000375740 CCDC191Q8NCU4 936 aa16.76■□□□□ 0.27
MSH5-202ENST00000375740 PIGBQ92521 554 aa16.76■□□□□ 0.27
MSH5-202ENST00000375740 MAP4K1Q92918 833 aa16.76■□□□□ 0.27
MSH5-202ENST00000375740 ASAP1Q9ULH1 1129 aa16.76■□□□□ 0.27
MSH5-202ENST00000375740 RBM8AQ9Y5S9 174 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms