RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 KCPQ6ZWJ8 1503 aa9.92□□□□□ -0.82
UBR4-202ENST00000375224 A0A087WZG4 1122 aa9.92□□□□□ -0.82
UBR4-202ENST00000375224 RABL6Q3YEC7 729 aaPredicted RBP9.92□□□□□ -0.82
UBR4-202ENST00000375224 ANP32BQ92688 251 aaKnown RBP9.92□□□□□ -0.82
UBR4-202ENST00000375224 MAP7D2Q96T17 732 aa9.92□□□□□ -0.82
UBR4-202ENST00000375224 TNPO1Q92973 898 aaKnown RBP9.91□□□□□ -0.82
UBR4-202ENST00000375224 GOLGA6L22H0YM25 854 aa9.91□□□□□ -0.82
UBR4-202ENST00000375224 SASH1O94885 1247 aa9.91□□□□□ -0.82
UBR4-202ENST00000375224 NEK4P51957 841 aa9.91□□□□□ -0.82
UBR4-202ENST00000375224 CWC25Q9NXE8 425 aaPredicted RBP9.91□□□□□ -0.82
UBR4-202ENST00000375224 HSPA4P34932 840 aa9.91□□□□□ -0.82
UBR4-202ENST00000375224 SKOR2Q2VWA4 1001 aaPredicted RBP9.91□□□□□ -0.82
UBR4-202ENST00000375224 UBE3BQ7Z3V4 1068 aa9.91□□□□□ -0.82
UBR4-202ENST00000375224 BTG4Q9NY30 223 aa9.91□□□□□ -0.82
UBR4-202ENST00000375224 RAD50Q92878 1312 aa9.9□□□□□ -0.82
UBR4-202ENST00000375224 NBPF26B4DH59 902 aa9.9□□□□□ -0.82
UBR4-202ENST00000375224 MAP4K4O95819 1239 aaPredicted RBP9.9□□□□□ -0.82
UBR4-202ENST00000375224 NBPF14Q5TI25 921 aa9.9□□□□□ -0.82
UBR4-202ENST00000375224 NBPF10Q6P3W6 841 aaKnown RBP9.9□□□□□ -0.82
UBR4-202ENST00000375224 NBPF15Q8N660 670 aa9.9□□□□□ -0.82
UBR4-202ENST00000375224 CCDC191Q8NCU4 936 aa9.9□□□□□ -0.82
UBR4-202ENST00000375224 H7C1W4 665 aa9.9□□□□□ -0.82
UBR4-202ENST00000375224 CLEC17AQ6ZS10 378 aa9.9□□□□□ -0.82
UBR4-202ENST00000375224 FOXD4L1Q9NU39 408 aa9.9□□□□□ -0.82
UBR4-202ENST00000375224 AHDC1Q5TGY3 1603 aaPredicted RBP9.9□□□□□ -0.83
UBR4-202ENST00000375224 PTCD1O75127 700 aaKnown RBP9.9□□□□□ -0.83
UBR4-202ENST00000375224 PIP4K2AP48426 406 aaPredicted RBP9.9□□□□□ -0.83
UBR4-202ENST00000375224 EAF2Q96CJ1 260 aaPredicted RBP9.9□□□□□ -0.83
UBR4-202ENST00000375224 ATP5J2-PTCD1G3V325 749 aa9.89□□□□□ -0.83
UBR4-202ENST00000375224 EPHA10Q5JZY3 1008 aa9.89□□□□□ -0.83
UBR4-202ENST00000375224 SIL1Q9H173 461 aa9.89□□□□□ -0.83
UBR4-202ENST00000375224 COL22A1Q8NFW1 1626 aaPredicted RBP9.89□□□□□ -0.83
UBR4-202ENST00000375224 NUP188Q5SRE5 1749 aa9.89□□□□□ -0.83
UBR4-202ENST00000375224 TRAK2O60296 914 aa9.89□□□□□ -0.83
UBR4-202ENST00000375224 RFX5P48382 616 aaPredicted RBP9.89□□□□□ -0.83
UBR4-202ENST00000375224 CASP7P55210 303 aa9.89□□□□□ -0.83
UBR4-202ENST00000375224 SMAP1Q8IYB5 467 aaPredicted RBP9.89□□□□□ -0.83
UBR4-202ENST00000375224 STARD3NLO95772 234 aa9.88□□□□□ -0.83
UBR4-202ENST00000375224 A1BGP04217 495 aa9.88□□□□□ -0.83
UBR4-202ENST00000375224 PTPN12Q05209 780 aaKnown RBP9.88□□□□□ -0.83
UBR4-202ENST00000375224 CWC27Q6UX04 472 aaKnown RBP9.88□□□□□ -0.83
UBR4-202ENST00000375224 LSG1Q9H089 658 aaKnown RBP9.88□□□□□ -0.83
UBR4-202ENST00000375224 INTS4Q96HW7 963 aaKnown RBP9.88□□□□□ -0.83
UBR4-202ENST00000375224 CDCA7Q9BWT1 371 aaPredicted RBP9.88□□□□□ -0.83
UBR4-202ENST00000375224 CCDC8Q9H0W5 538 aaPredicted RBP9.88□□□□□ -0.83
UBR4-202ENST00000375224 ROBO1Q9Y6N7 1651 aa9.88□□□□□ -0.83
UBR4-202ENST00000375224 TTLL7Q6ZT98 887 aa9.88□□□□□ -0.83
UBR4-202ENST00000375224 DISP2A7MBM2 1401 aa9.87□□□□□ -0.83
UBR4-202ENST00000375224 LRP6O75581 1613 aa9.87□□□□□ -0.83
UBR4-202ENST00000375224 TOGARAM1Q9Y4F4 1720 aa9.87□□□□□ -0.83
UBR4-202ENST00000375224 KIF6Q6ZMV9 814 aa9.87□□□□□ -0.83
UBR4-202ENST00000375224 TMX3Q96JJ7 454 aa9.87□□□□□ -0.83
UBR4-202ENST00000375224 ATG3Q9NT62 314 aa9.87□□□□□ -0.83
UBR4-202ENST00000375224 PALD1Q9ULE6 856 aa9.87□□□□□ -0.83
UBR4-202ENST00000375224 PLCH1Q4KWH8 1693 aa9.87□□□□□ -0.83
UBR4-202ENST00000375224 EXOC5O00471 708 aa9.87□□□□□ -0.83
UBR4-202ENST00000375224 ATP5JP18859 108 aa9.87□□□□□ -0.83
UBR4-202ENST00000375224 CUL4AQ13619 759 aa9.87□□□□□ -0.83
UBR4-202ENST00000375224 LMBR1LQ6UX01 489 aa9.87□□□□□ -0.83
UBR4-202ENST00000375224 TICAM2Q86XR7 235 aa9.87□□□□□ -0.83
UBR4-202ENST00000375224 TEX2Q8IWB9 1127 aa9.87□□□□□ -0.83
UBR4-202ENST00000375224 TRIM28Q13263 835 aaKnown RBP9.87□□□□□ -0.83
UBR4-202ENST00000375224 TNNI3KQ59H18 835 aa9.87□□□□□ -0.83
UBR4-202ENST00000375224 GPR108Q9NPR9 543 aa9.87□□□□□ -0.83
UBR4-202ENST00000375224 FPGT-TNNI3KV9GXZ4 949 aa9.87□□□□□ -0.83
UBR4-202ENST00000375224 VGLL3A8MV65 326 aa9.86□□□□□ -0.83
UBR4-202ENST00000375224 PIGBQ92521 554 aa9.86□□□□□ -0.83
UBR4-202ENST00000375224 TRIM44Q96DX7 344 aaPredicted RBP9.86□□□□□ -0.83
UBR4-202ENST00000375224 RFX7Q2KHR2 1363 aa9.86□□□□□ -0.83
UBR4-202ENST00000375224 SSFA2P28290 1259 aa9.86□□□□□ -0.83
UBR4-202ENST00000375224 FOXO4P98177 505 aa9.86□□□□□ -0.83
UBR4-202ENST00000375224 TCIRG1Q13488 830 aa9.86□□□□□ -0.83
UBR4-202ENST00000375224 DNTTIP2Q5QJE6 756 aaKnown RBP9.86□□□□□ -0.83
UBR4-202ENST00000375224 KLHDC4Q8TBB5 520 aa9.86□□□□□ -0.83
UBR4-202ENST00000375224 FSD1Q9BTV5 496 aa9.86□□□□□ -0.83
UBR4-202ENST00000375224 ISCA1Q9BUE6 129 aa9.86□□□□□ -0.83
UBR4-202ENST00000375224 ZBTB3Q9H5J0 574 aa9.86□□□□□ -0.83
UBR4-202ENST00000375224 IL15P40933 162 aaPredicted RBP9.86□□□□□ -0.83
UBR4-202ENST00000375224 TFCP2Q12800 502 aa9.86□□□□□ -0.83
UBR4-202ENST00000375224 HSP90AB3PQ58FF7 597 aa9.86□□□□□ -0.83
UBR4-202ENST00000375224 SNRKQ9NRH2 765 aa9.86□□□□□ -0.83
UBR4-202ENST00000375224 FBXO3Q9UK99 471 aa9.86□□□□□ -0.83
UBR4-202ENST00000375224 ISY1Q9ULR0 285 aaKnown RBP9.86□□□□□ -0.83
UBR4-202ENST00000375224 CHMP3Q9Y3E7 222 aa9.86□□□□□ -0.83
UBR4-202ENST00000375224 SNX14Q9Y5W7 946 aa9.86□□□□□ -0.83
UBR4-202ENST00000375224 ITGB4P16144 1822 aa9.85□□□□□ -0.83
UBR4-202ENST00000375224 CYP2E1P05181 493 aaPredicted RBP9.85□□□□□ -0.83
UBR4-202ENST00000375224 ZKSCAN1P17029 563 aaPredicted RBP9.85□□□□□ -0.83
UBR4-202ENST00000375224 JARID2Q92833 1246 aaPredicted RBP9.85□□□□□ -0.83
UBR4-202ENST00000375224 TM6SF1Q9BZW5 370 aa9.85□□□□□ -0.83
UBR4-202ENST00000375224 IL25Q9H293 177 aa9.85□□□□□ -0.83
UBR4-202ENST00000375224 BOLA2Q9H3K6 86 aa9.85□□□□□ -0.83
UBR4-202ENST00000375224 BAG4O95429 457 aaKnown RBP9.85□□□□□ -0.83
UBR4-202ENST00000375224 KCNB2Q92953 911 aa9.85□□□□□ -0.83
UBR4-202ENST00000375224 SECISBP2LQ93073 1101 aaKnown RBP9.85□□□□□ -0.83
UBR4-202ENST00000375224 THRAP3Q9Y2W1 955 aaKnown RBP9.85□□□□□ -0.83
UBR4-202ENST00000375224 TJP1Q07157 1748 aa9.84□□□□□ -0.83
UBR4-202ENST00000375224 CIAO1O76071 339 aa9.84□□□□□ -0.83
UBR4-202ENST00000375224 RNF20Q5VTR2 975 aa9.84□□□□□ -0.83
UBR4-202ENST00000375224 BCCIPQ9P287 314 aaKnown RBP eCLIP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms