RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 TRAPPC3LQ5T215 181 aa21.58■■□□□ 1.05
HLA-DMA-201ENST00000374843 SIRT2Q8IXJ6 389 aa21.58■■□□□ 1.05
HLA-DMA-201ENST00000374843 ARXQ96QS3 562 aa21.58■■□□□ 1.05
HLA-DMA-201ENST00000374843 BCL2L12Q9HB09 334 aa21.58■■□□□ 1.05
HLA-DMA-201ENST00000374843 MTX1Q13505 466 aa21.57■■□□□ 1.04
HLA-DMA-201ENST00000374843 EZH2Q15910 746 aaKnown RBP21.57■■□□□ 1.04
HLA-DMA-201ENST00000374843 PARP10Q53GL7 1025 aa21.57■■□□□ 1.04
HLA-DMA-201ENST00000374843 RWDD1Q9H446 243 aaPredicted RBP21.57■■□□□ 1.04
HLA-DMA-201ENST00000374843 IGHDP01880 384 aa21.56■■□□□ 1.04
HLA-DMA-201ENST00000374843 SUCLG2Q96I99 432 aa21.56■■□□□ 1.04
HLA-DMA-201ENST00000374843 LAMB2P55268 1798 aa21.56■■□□□ 1.04
HLA-DMA-201ENST00000374843 CDHR2Q9BYE9 1310 aa21.55■■□□□ 1.04
HLA-DMA-201ENST00000374843 ZPR1O75312 459 aa21.55■■□□□ 1.04
HLA-DMA-201ENST00000374843 PCCAP05165 728 aaPredicted RBP21.55■■□□□ 1.04
HLA-DMA-201ENST00000374843 USPL1Q5W0Q7 1092 aa21.55■■□□□ 1.04
HLA-DMA-201ENST00000374843 SMIM5Q71RC9 77 aa21.55■■□□□ 1.04
HLA-DMA-201ENST00000374843 UBE3BQ7Z3V4 1068 aa21.55■■□□□ 1.04
HLA-DMA-201ENST00000374843 KAZALD1Q96I82 304 aa21.55■■□□□ 1.04
HLA-DMA-201ENST00000374843 SRP68Q9UHB9 627 aaKnown RBP21.55■■□□□ 1.04
HLA-DMA-201ENST00000374843 PHF14O94880 888 aa21.54■■□□□ 1.04
HLA-DMA-201ENST00000374843 GPTP24298 496 aa21.54■■□□□ 1.04
HLA-DMA-201ENST00000374843 RFC4P35249 363 aa21.54■■□□□ 1.04
HLA-DMA-201ENST00000374843 ZBTB38Q8NAP3 1195 aaPredicted RBP21.54■■□□□ 1.04
HLA-DMA-201ENST00000374843 FLAD1Q8NFF5 587 aa21.54■■□□□ 1.04
HLA-DMA-201ENST00000374843 RABL6Q3YEC7 729 aaPredicted RBP21.53■■□□□ 1.04
HLA-DMA-201ENST00000374843 PLA2G12BQ9BX93 195 aa21.53■■□□□ 1.04
HLA-DMA-201ENST00000374843 HMMRO75330 724 aa21.52■■□□□ 1.04
HLA-DMA-201ENST00000374843 ATP8B2P98198 1209 aa21.52■■□□□ 1.04
HLA-DMA-201ENST00000374843 DEFB132Q7Z7B7 95 aa21.52■■□□□ 1.04
HLA-DMA-201ENST00000374843 SMC5Q8IY18 1101 aa21.52■■□□□ 1.04
HLA-DMA-201ENST00000374843 ANO8Q9HCE9 1232 aaPredicted RBP21.52■■□□□ 1.04
HLA-DMA-201ENST00000374843 NIP7Q9Y221 180 aaKnown RBP eCLIP21.52■■□□□ 1.04
HLA-DMA-201ENST00000374843 NTSR2O95665 410 aa21.51■■□□□ 1.03
HLA-DMA-201ENST00000374843 POLA2Q14181 598 aa21.51■■□□□ 1.03
HLA-DMA-201ENST00000374843 SSH3Q8TE77 659 aa21.51■■□□□ 1.03
HLA-DMA-201ENST00000374843 BICC1Q9H694 974 aaKnown RBP21.51■■□□□ 1.03
HLA-DMA-201ENST00000374843 TFCP2L1Q9NZI6 479 aa21.51■■□□□ 1.03
HLA-DMA-201ENST00000374843 TBC1D9BQ66K14 1250 aa21.5■■□□□ 1.03
HLA-DMA-201ENST00000374843 PNPLA7Q6ZV29 1317 aa21.5■■□□□ 1.03
HLA-DMA-201ENST00000374843 PNMA6EA0A0J9YXQ4 647 aa21.49■■□□□ 1.03
HLA-DMA-201ENST00000374843 GYS1P13807 737 aa21.49■■□□□ 1.03
HLA-DMA-201ENST00000374843 EPHA10Q5JZY3 1008 aa21.49■■□□□ 1.03
HLA-DMA-201ENST00000374843 SUSD4Q5VX71 490 aa21.49■■□□□ 1.03
HLA-DMA-201ENST00000374843 UTP14AQ9BVJ6 771 aaKnown RBP21.49■■□□□ 1.03
HLA-DMA-201ENST00000374843 DDX60Q8IY21 1712 aaKnown RBP21.49■■□□□ 1.03
HLA-DMA-201ENST00000374843 FOXO4P98177 505 aa21.48■■□□□ 1.03
HLA-DMA-201ENST00000374843 SLC15A2Q16348 729 aa21.48■■□□□ 1.03
HLA-DMA-201ENST00000374843 PPP1R42Q7Z4L9 355 aa21.48■■□□□ 1.03
HLA-DMA-201ENST00000374843 GCC1Q96CN9 775 aa21.48■■□□□ 1.03
HLA-DMA-201ENST00000374843 STK32BQ9NY57 414 aa21.48■■□□□ 1.03
HLA-DMA-201ENST00000374843 TRMT112Q9UI30 125 aaKnown RBP21.48■■□□□ 1.03
HLA-DMA-201ENST00000374843 SH3TC1Q8TE82 1336 aa21.48■■□□□ 1.03
HLA-DMA-201ENST00000374843 CARMIL3Q8ND23 1372 aa21.48■■□□□ 1.03
HLA-DMA-201ENST00000374843 COL23A1Q86Y22 540 aaPredicted RBP21.47■■□□□ 1.03
HLA-DMA-201ENST00000374843 JARID2Q92833 1246 aaPredicted RBP21.47■■□□□ 1.03
HLA-DMA-201ENST00000374843 FAM89AQ96GI7 184 aa21.47■■□□□ 1.03
HLA-DMA-201ENST00000374843 DCTPP1Q9H773 170 aa21.47■■□□□ 1.03
HLA-DMA-201ENST00000374843 RIC1Q4ADV7 1423 aa21.46■■□□□ 1.03
HLA-DMA-201ENST00000374843 SRGAP3O43295 1099 aa21.46■■□□□ 1.03
HLA-DMA-201ENST00000374843 MYH3P11055 1940 aa21.45■■□□□ 1.02
HLA-DMA-201ENST00000374843 UPF1Q92900 1129 aaKnown RBP eCLIP21.45■■□□□ 1.02
HLA-DMA-201ENST00000374843 SETDB2Q96T68 719 aa21.45■■□□□ 1.02
HLA-DMA-201ENST00000374843 NYXQ9GZU5 481 aa21.45■■□□□ 1.02
HLA-DMA-201ENST00000374843 LRP5O75197 1615 aa21.44■■□□□ 1.02
HLA-DMA-201ENST00000374843 IRS4O14654 1257 aaPredicted RBP21.44■■□□□ 1.02
HLA-DMA-201ENST00000374843 HSP90B1P14625 803 aaKnown RBP21.44■■□□□ 1.02
HLA-DMA-201ENST00000374843 NFIXQ14938 502 aa21.44■■□□□ 1.02
HLA-DMA-201ENST00000374843 NOP58Q9Y2X3 529 aaKnown RBP21.43■■□□□ 1.02
HLA-DMA-201ENST00000374843 NRXN2Q9P2S2 1712 aa21.43■■□□□ 1.02
HLA-DMA-201ENST00000374843 PDE8AO60658 829 aa21.42■■□□□ 1.02
HLA-DMA-201ENST00000374843 CSF1RP07333 972 aa21.42■■□□□ 1.02
HLA-DMA-201ENST00000374843 TM4SF1P30408 202 aa21.42■■□□□ 1.02
HLA-DMA-201ENST00000374843 RFX5P48382 616 aaPredicted RBP21.42■■□□□ 1.02
HLA-DMA-201ENST00000374843 CTSWP56202 376 aa21.42■■□□□ 1.02
HLA-DMA-201ENST00000374843 RTL5Q5HYW3 569 aaPredicted RBP21.42■■□□□ 1.02
HLA-DMA-201ENST00000374843 LMBR1LQ6UX01 489 aa21.42■■□□□ 1.02
HLA-DMA-201ENST00000374843 SYNE4Q8N205 404 aa21.42■■□□□ 1.02
HLA-DMA-201ENST00000374843 RTL9Q8NET4 1388 aa21.42■■□□□ 1.02
HLA-DMA-201ENST00000374843 ABCC12Q96J65 1359 aa21.42■■□□□ 1.02
HLA-DMA-201ENST00000374843 NUCB1Q02818 461 aa21.41■■□□□ 1.02
HLA-DMA-201ENST00000374843 SLC10A5Q5PT55 438 aa21.41■■□□□ 1.02
HLA-DMA-201ENST00000374843 BICDL1Q6ZP65 573 aa21.41■■□□□ 1.02
HLA-DMA-201ENST00000374843 NBPF5PQ86XG9 351 aaPredicted RBP21.4■■□□□ 1.02
HLA-DMA-201ENST00000374843 NLGN1Q8N2Q7 840 aa21.4■■□□□ 1.02
HLA-DMA-201ENST00000374843 COPRSQ9NQ92 184 aa21.4■■□□□ 1.02
HLA-DMA-201ENST00000374843 CASZ1Q86V15 1759 aa21.39■■□□□ 1.01
HLA-DMA-201ENST00000374843 DDR1Q08345 913 aa21.39■■□□□ 1.01
HLA-DMA-201ENST00000374843 PDZRN3Q9UPQ7 1066 aa21.39■■□□□ 1.01
HLA-DMA-201ENST00000374843 TNRC6CQ9HCJ0 1690 aaKnown RBP21.39■■□□□ 1.01
HLA-DMA-201ENST00000374843 ERFEQ4G0M1 354 aa21.38■■□□□ 1.01
HLA-DMA-201ENST00000374843 HSP90AB4PQ58FF6 505 aa21.38■■□□□ 1.01
HLA-DMA-201ENST00000374843 TPTE2Q6XPS3 522 aa21.38■■□□□ 1.01
HLA-DMA-201ENST00000374843 NUTM1Q86Y26 1132 aa21.38■■□□□ 1.01
HLA-DMA-201ENST00000374843 TTLL11Q8NHH1 800 aa21.38■■□□□ 1.01
HLA-DMA-201ENST00000374843 FAM177BA6PVY3 158 aa21.37■■□□□ 1.01
HLA-DMA-201ENST00000374843 POLRMTO00411 1230 aaKnown RBP21.37■■□□□ 1.01
HLA-DMA-201ENST00000374843 RAB11FIP3O75154 756 aa21.37■■□□□ 1.01
HLA-DMA-201ENST00000374843 FAM161AQ3B820 660 aa21.37■■□□□ 1.01
HLA-DMA-201ENST00000374843 EXOC6BQ9Y2D4 811 aa21.37■■□□□ 1.01
HLA-DMA-201ENST00000374843 HCLS1P14317 486 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms