RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 DDX58O95786 925 aaKnown RBP21.45■■□□□ 1.02
PHF1-201ENST00000374512 PSMA5P28066 241 aa21.45■■□□□ 1.02
PHF1-201ENST00000374512 ZC3H6P61129 1189 aaKnown RBP21.45■■□□□ 1.02
PHF1-201ENST00000374512 PTH1RQ03431 593 aa21.45■■□□□ 1.02
PHF1-201ENST00000374512 LINS1Q8NG48 757 aa21.45■■□□□ 1.02
PHF1-201ENST00000374512 MTMR6Q9Y217 621 aa21.45■■□□□ 1.02
PHF1-201ENST00000374512 PRPF40BQ6NWY9 871 aaKnown RBP21.44■■□□□ 1.02
PHF1-201ENST00000374512 MTERF4Q7Z6M4 381 aaKnown RBP21.44■■□□□ 1.02
PHF1-201ENST00000374512 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.44■■□□□ 1.021e-6■□□□□ 10.5
PHF1-201ENST00000374512 PRAMEF22A3QJZ6 481 aa21.44■■□□□ 1.02
PHF1-201ENST00000374512 MAP4K1Q92918 833 aa21.44■■□□□ 1.02
PHF1-201ENST00000374512 ALDH8A1Q9H2A2 487 aaPredicted RBP21.44■■□□□ 1.02
PHF1-201ENST00000374512 DDX21Q9NR30 783 aaKnown RBP eCLIP21.44■■□□□ 1.02
PHF1-201ENST00000374512 CWF19L2Q2TBE0 894 aaKnown RBP21.43■■□□□ 1.02
PHF1-201ENST00000374512 CADPS2Q86UW7 1296 aa21.43■■□□□ 1.02
PHF1-201ENST00000374512 ANKRD1Q15327 319 aa21.43■■□□□ 1.02
PHF1-201ENST00000374512 CCDC83Q8IWF9 413 aa21.43■■□□□ 1.02
PHF1-201ENST00000374512 UQCRHLA0A096LP55 91 aa21.42■■□□□ 1.02
PHF1-201ENST00000374512 GRM8O00222 908 aa21.42■■□□□ 1.02
PHF1-201ENST00000374512 UQCRHP07919 91 aa21.42■■□□□ 1.02
PHF1-201ENST00000374512 PDCP20941 246 aa21.42■■□□□ 1.02
PHF1-201ENST00000374512 AACSQ86V21 672 aa21.42■■□□□ 1.02
PHF1-201ENST00000374512 NPHP3Q7Z494 1330 aa21.42■■□□□ 1.02
PHF1-201ENST00000374512 LARGE1O95461 756 aa21.41■■□□□ 1.02
PHF1-201ENST00000374512 G3BP1Q13283 466 aaKnown RBP eCLIP21.41■■□□□ 1.02
PHF1-201ENST00000374512 ADCK5Q3MIX3 580 aa21.41■■□□□ 1.02
PHF1-201ENST00000374512 RNF20Q5VTR2 975 aa21.41■■□□□ 1.02
PHF1-201ENST00000374512 RAPGEF4Q8WZA2 1011 aa21.41■■□□□ 1.02
PHF1-201ENST00000374512 FUCA2Q9BTY2 467 aa21.41■■□□□ 1.02
PHF1-201ENST00000374512 COL18A1P39060 1754 aa21.41■■□□□ 1.02
PHF1-201ENST00000374512 SCN11AQ9UI33 1791 aa21.41■■□□□ 1.02
PHF1-201ENST00000374512 FIBPO43427 364 aa21.41■■□□□ 1.02
PHF1-201ENST00000374512 KDM4AO75164 1064 aa21.41■■□□□ 1.02
PHF1-201ENST00000374512 CREB3L3Q68CJ9 461 aa21.41■■□□□ 1.02
PHF1-201ENST00000374512 PIBF1Q8WXW3 757 aa21.41■■□□□ 1.02
PHF1-201ENST00000374512 ADCY5O95622 1261 aa21.4■■□□□ 1.02
PHF1-201ENST00000374512 RBM8AQ9Y5S9 174 aaKnown RBP21.4■■□□□ 1.02
PHF1-201ENST00000374512 TPM3P06753 285 aa21.4■■□□□ 1.02
PHF1-201ENST00000374512 USP25Q9UHP3 1055 aa21.4■■□□□ 1.02
PHF1-201ENST00000374512 ELP1O95163 1332 aa21.39■■□□□ 1.02
PHF1-201ENST00000374512 HCLS1P14317 486 aaPredicted RBP21.39■■□□□ 1.01
PHF1-201ENST00000374512 CPA1P15085 419 aa21.39■■□□□ 1.01
PHF1-201ENST00000374512 ZNF790Q6PG37 636 aa21.39■■□□□ 1.01
PHF1-201ENST00000374512 DDX17Q92841 729 aaKnown RBP21.39■■□□□ 1.01
PHF1-201ENST00000374512 PA2G4Q9UQ80 394 aaKnown RBP21.39■■□□□ 1.01
PHF1-201ENST00000374512 DNM1Q05193 864 aaKnown RBP21.39■■□□□ 1.01
PHF1-201ENST00000374512 PDIA6Q15084 440 aa21.39■■□□□ 1.01
PHF1-201ENST00000374512 ME3Q16798 604 aa21.39■■□□□ 1.01
PHF1-201ENST00000374512 SUCLG2Q96I99 432 aa21.39■■□□□ 1.01
PHF1-201ENST00000374512 SLC52A2Q9HAB3 445 aa21.39■■□□□ 1.01
PHF1-201ENST00000374512 TNS3Q68CZ2 1445 aa21.39■■□□□ 1.01
PHF1-201ENST00000374512 ABCC6O95255 1503 aa21.38■■□□□ 1.01
PHF1-201ENST00000374512 KCNJ4P48050 445 aa21.38■■□□□ 1.01
PHF1-201ENST00000374512 AIMP1Q12904 312 aaKnown RBP21.38■■□□□ 1.01
PHF1-201ENST00000374512 LARP6Q9BRS8 491 aaKnown RBP21.38■■□□□ 1.01
PHF1-201ENST00000374512 NLRP2Q9NX02 1062 aa21.38■■□□□ 1.01
PHF1-201ENST00000374512 HMG20BQ9P0W2 317 aa21.38■■□□□ 1.01
PHF1-201ENST00000374512 SASH1O94885 1247 aa21.37■■□□□ 1.01
PHF1-201ENST00000374512 TSGA10IPQ3SY00 556 aa21.37■■□□□ 1.01
PHF1-201ENST00000374512 PRIMPOLQ96LW4 560 aa21.37■■□□□ 1.01
PHF1-201ENST00000374512 C5P01031 1676 aa21.37■■□□□ 1.01
PHF1-201ENST00000374512 KRT85P78386 507 aa21.37■■□□□ 1.01
PHF1-201ENST00000374512 MRC1P22897 1456 aa21.36■■□□□ 1.01
PHF1-201ENST00000374512 SLC27A2O14975 620 aa21.36■■□□□ 1.01
PHF1-201ENST00000374512 TATP17735 454 aaPredicted RBP21.36■■□□□ 1.01
PHF1-201ENST00000374512 HMGN5P82970 282 aaKnown RBP21.36■■□□□ 1.01
PHF1-201ENST00000374512 NMIQ13287 307 aaPredicted RBP21.36■■□□□ 1.01
PHF1-201ENST00000374512 LARP1BQ659C4 914 aaKnown RBP21.36■■□□□ 1.01
PHF1-201ENST00000374512 LARP1Q6PKG0 1096 aaKnown RBP21.36■■□□□ 1.01
PHF1-201ENST00000374512 RIC3Q7Z5B4 369 aa21.36■■□□□ 1.01
PHF1-201ENST00000374512 EAF2Q96CJ1 260 aaPredicted RBP21.36■■□□□ 1.01
PHF1-201ENST00000374512 KAZALD1Q96I82 304 aa21.36■■□□□ 1.01
PHF1-201ENST00000374512 BICC1Q9H694 974 aaKnown RBP21.36■■□□□ 1.01
PHF1-201ENST00000374512 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.36■■□□□ 1.013e-6■■□□□ 13.2
PHF1-201ENST00000374512 PLEKHG2Q9H7P9 1386 aa21.36■■□□□ 1.01
PHF1-201ENST00000374512 JCADQ9P266 1359 aa21.36■■□□□ 1.01
PHF1-201ENST00000374512 KDM6AO15550 1401 aaPredicted RBP21.36■■□□□ 1.01
PHF1-201ENST00000374512 CCDC192P0DO97 292 aa21.36■■□□□ 1.01
PHF1-201ENST00000374512 ST3GAL1Q11201 340 aa21.36■■□□□ 1.01
PHF1-201ENST00000374512 TPCN1Q9ULQ1 816 aa21.36■■□□□ 1.01
PHF1-201ENST00000374512 NEXNQ0ZGT2 675 aa21.35■■□□□ 1.01
PHF1-201ENST00000374512 SLC39A6Q13433 755 aa21.35■■□□□ 1.01
PHF1-201ENST00000374512 BLOC1S2Q6QNY1 142 aa21.35■■□□□ 1.01
PHF1-201ENST00000374512 MED23Q9ULK4 1368 aa21.35■■□□□ 1.01
PHF1-201ENST00000374512 VPS37CA5D8V6 355 aaPredicted RBP21.35■■□□□ 1.01
PHF1-201ENST00000374512 PHKG2P15735 406 aa21.35■■□□□ 1.01
PHF1-201ENST00000374512 SPTLC3Q9NUV7 552 aa21.35■■□□□ 1.01
PHF1-201ENST00000374512 NOLC1Q14978 699 aaKnown RBP eCLIP21.34■■□□□ 1.019e-9■□□□□ 9.2
PHF1-201ENST00000374512 FAM227BQ96M60 508 aa21.34■■□□□ 1.01
PHF1-201ENST00000374512 SPATA31A3Q5VYP0 1347 aa21.34■■□□□ 1.01
PHF1-201ENST00000374512 IGKV5-2P06315 115 aa21.33■■□□□ 1.01
PHF1-201ENST00000374512 GIMAP6Q6P9H5 292 aa21.33■■□□□ 1.01
PHF1-201ENST00000374512 SCAND2PQ9GZW5 306 aaPredicted RBP21.33■■□□□ 1.01
PHF1-201ENST00000374512 RPS6KB1P23443 525 aa21.33■■□□□ 1
PHF1-201ENST00000374512 KRT32Q14532 448 aa21.33■■□□□ 1
PHF1-201ENST00000374512 NFATC2IPQ8NCF5 419 aa21.33■■□□□ 1
PHF1-201ENST00000374512 MYRIPQ8NFW9 859 aa21.33■■□□□ 1
PHF1-201ENST00000374512 XIRP1Q702N8 1843 aaKnown RBP21.33■■□□□ 1
PHF1-201ENST00000374512 RFX7Q2KHR2 1363 aa21.32■■□□□ 1
PHF1-201ENST00000374512 IFNL2Q8IZJ0 200 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms