RNA–Protein interactions for RNA: ENST00000373831.7

RCC1-201, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 1 (best) BASIC

Gene RCC1, Length 1,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-201ENST00000373831 TRIM28Q13263 835 aaKnown RBP18.24■□□□□ 0.51
RCC1-201ENST00000373831 GNAI2P04899 355 aa18.23■□□□□ 0.51
RCC1-201ENST00000373831 BCL2L12Q9HB09 334 aa18.23■□□□□ 0.51
RCC1-201ENST00000373831 C9orf78Q9NZ63 289 aaPredicted RBP18.23■□□□□ 0.51
RCC1-201ENST00000373831 TFCP2L1Q9NZI6 479 aa18.23■□□□□ 0.51
RCC1-201ENST00000373831 SRP68Q9UHB9 627 aaKnown RBP18.23■□□□□ 0.51
RCC1-201ENST00000373831 LRRFIP2Q9Y608 721 aaKnown RBP18.23■□□□□ 0.51
RCC1-201ENST00000373831 PNPLA7Q6ZV29 1317 aa18.23■□□□□ 0.51
RCC1-201ENST00000373831 PHF14O94880 888 aa18.22■□□□□ 0.51
RCC1-201ENST00000373831 GPTP24298 496 aa18.22■□□□□ 0.51
RCC1-201ENST00000373831 CASP7P55210 303 aa18.22■□□□□ 0.51
RCC1-201ENST00000373831 CEP85Q6P2H3 762 aa18.22■□□□□ 0.51
RCC1-201ENST00000373831 ZNF34Q8IZ26 560 aa18.22■□□□□ 0.51
RCC1-201ENST00000373831 CCDC191Q8NCU4 936 aa18.22■□□□□ 0.51
RCC1-201ENST00000373831 JARID2Q92833 1246 aaPredicted RBP18.22■□□□□ 0.51
RCC1-201ENST00000373831 KAZALD1Q96I82 304 aa18.22■□□□□ 0.51
RCC1-201ENST00000373831 CWC25Q9NXE8 425 aaPredicted RBP18.22■□□□□ 0.51
RCC1-201ENST00000373831 NARFQ9UHQ1 456 aa18.22■□□□□ 0.51
RCC1-201ENST00000373831 UBN2Q6ZU65 1347 aa18.22■□□□□ 0.51
RCC1-201ENST00000373831 COL24A1Q17RW2 1714 aa18.22■□□□□ 0.51
RCC1-201ENST00000373831 HDAC1Q13547 482 aaPredicted RBP18.21■□□□□ 0.51
RCC1-201ENST00000373831 HSP90AB3PQ58FF7 597 aa18.21■□□□□ 0.51
RCC1-201ENST00000373831 NLRP10Q86W26 655 aa18.21■□□□□ 0.51
RCC1-201ENST00000373831 SLC16A10Q8TF71 515 aa18.21■□□□□ 0.51
RCC1-201ENST00000373831 QSER1Q2KHR3 1735 aa18.21■□□□□ 0.51
RCC1-201ENST00000373831 MYH3P11055 1940 aa18.21■□□□□ 0.51
RCC1-201ENST00000373831 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.21■□□□□ 0.51
RCC1-201ENST00000373831 H7C1W4 665 aa18.21■□□□□ 0.51
RCC1-201ENST00000373831 TRAPPC3LQ5T215 181 aa18.21■□□□□ 0.51
RCC1-201ENST00000373831 USPL1Q5W0Q7 1092 aa18.21■□□□□ 0.51
RCC1-201ENST00000373831 ANKRD44Q8N8A2 993 aa18.21■□□□□ 0.51
RCC1-201ENST00000373831 SUCLG2Q96I99 432 aa18.21■□□□□ 0.51
RCC1-201ENST00000373831 ADRA2BP18089 450 aa18.2■□□□□ 0.5
RCC1-201ENST00000373831 UBE3BQ7Z3V4 1068 aa18.2■□□□□ 0.5
RCC1-201ENST00000373831 KLHL34Q8N239 644 aa18.2■□□□□ 0.5
RCC1-201ENST00000373831 USP42Q9H9J4 1324 aaKnown RBP18.2■□□□□ 0.5
RCC1-201ENST00000373831 UTRNP46939 3433 aa18.2■□□□□ 0.5
RCC1-201ENST00000373831 RGL2O15211 777 aa18.19■□□□□ 0.5
RCC1-201ENST00000373831 SSFA2P28290 1259 aa18.19■□□□□ 0.5
RCC1-201ENST00000373831 POLD1P28340 1107 aa18.19■□□□□ 0.5
RCC1-201ENST00000373831 CLEC4GQ6UXB4 293 aa18.19■□□□□ 0.5
RCC1-201ENST00000373831 RPAP2Q8IXW5 612 aaPredicted RBP18.19■□□□□ 0.5
RCC1-201ENST00000373831 DDX60Q8IY21 1712 aaKnown RBP18.19■□□□□ 0.5
RCC1-201ENST00000373831 LAMB2P55268 1798 aa18.18■□□□□ 0.5
RCC1-201ENST00000373831 HMGB2P26583 209 aaKnown RBP18.18■□□□□ 0.5
RCC1-201ENST00000373831 EPHA10Q5JZY3 1008 aa18.18■□□□□ 0.5
RCC1-201ENST00000373831 RWDD1Q9H446 243 aaPredicted RBP18.18■□□□□ 0.5
RCC1-201ENST00000373831 PNMA6EA0A0J9YXQ4 647 aa18.17■□□□□ 0.5
RCC1-201ENST00000373831 RFC4P35249 363 aa18.17■□□□□ 0.5
RCC1-201ENST00000373831 CENPQQ7L2Z9 268 aaPredicted RBP18.17■□□□□ 0.5
RCC1-201ENST00000373831 ZNF784Q8NCA9 323 aaPredicted RBP18.17■□□□□ 0.5
RCC1-201ENST00000373831 ZNF652Q9Y2D9 606 aa18.17■□□□□ 0.5
RCC1-201ENST00000373831 ZPR1O75312 459 aa18.17■□□□□ 0.5
RCC1-201ENST00000373831 PCCAP05165 728 aaPredicted RBP18.17■□□□□ 0.5
RCC1-201ENST00000373831 ATP8B2P98198 1209 aa18.17■□□□□ 0.5
RCC1-201ENST00000373831 RTL5Q5HYW3 569 aaPredicted RBP18.17■□□□□ 0.5
RCC1-201ENST00000373831 SUSD4Q5VX71 490 aa18.17■□□□□ 0.5
RCC1-201ENST00000373831 TBC1D9BQ66K14 1250 aa18.17■□□□□ 0.5
RCC1-201ENST00000373831 SYNE4Q8N205 404 aa18.17■□□□□ 0.5
RCC1-201ENST00000373831 BICC1Q9H694 974 aaKnown RBP18.16■□□□□ 0.5
RCC1-201ENST00000373831 NIP7Q9Y221 180 aaKnown RBP eCLIP18.16■□□□□ 0.5
RCC1-201ENST00000373831 MSH5O43196 834 aa18.15■□□□□ 0.5
RCC1-201ENST00000373831 MTX1Q13505 466 aa18.15■□□□□ 0.5
RCC1-201ENST00000373831 GPR162Q16538 588 aa18.15■□□□□ 0.5
RCC1-201ENST00000373831 ZBTB38Q8NAP3 1195 aaPredicted RBP18.15■□□□□ 0.5
RCC1-201ENST00000373831 FAM89AQ96GI7 184 aa18.15■□□□□ 0.5
RCC1-201ENST00000373831 FOXO4P98177 505 aa18.14■□□□□ 0.49
RCC1-201ENST00000373831 PARP10Q53GL7 1025 aa18.14■□□□□ 0.49
RCC1-201ENST00000373831 PPP1R42Q7Z4L9 355 aa18.14■□□□□ 0.49
RCC1-201ENST00000373831 COL23A1Q86Y22 540 aaPredicted RBP18.14■□□□□ 0.49
RCC1-201ENST00000373831 NTSR2O95665 410 aa18.13■□□□□ 0.49
RCC1-201ENST00000373831 GYS1P13807 737 aa18.13■□□□□ 0.49
RCC1-201ENST00000373831 POLA2Q14181 598 aa18.13■□□□□ 0.49
RCC1-201ENST00000373831 SMC5Q8IY18 1101 aa18.13■□□□□ 0.49
RCC1-201ENST00000373831 SSH3Q8TE77 659 aa18.13■□□□□ 0.49
RCC1-201ENST00000373831 HDAC5Q9UQL6 1122 aa18.13■□□□□ 0.49
RCC1-201ENST00000373831 CDHR2Q9BYE9 1310 aa18.13■□□□□ 0.49
RCC1-201ENST00000373831 RABL6Q3YEC7 729 aaPredicted RBP18.13■□□□□ 0.49
RCC1-201ENST00000373831 BICDL1Q6ZP65 573 aa18.13■□□□□ 0.49
RCC1-201ENST00000373831 TRMT112Q9UI30 125 aaKnown RBP18.13■□□□□ 0.49
RCC1-201ENST00000373831 FAM177BA6PVY3 158 aa18.12■□□□□ 0.49
RCC1-201ENST00000373831 SRGAP3O43295 1099 aa18.12■□□□□ 0.49
RCC1-201ENST00000373831 PELP1Q8IZL8 1130 aaKnown RBP18.12■□□□□ 0.49
RCC1-201ENST00000373831 NLGN2Q8NFZ4 835 aa18.12■□□□□ 0.49
RCC1-201ENST00000373831 UTP14AQ9BVJ6 771 aaKnown RBP18.12■□□□□ 0.49
RCC1-201ENST00000373831 DCTPP1Q9H773 170 aa18.12■□□□□ 0.49
RCC1-201ENST00000373831 SKAP1Q86WV1 359 aa18.11■□□□□ 0.49
RCC1-201ENST00000373831 PLA2G12BQ9BX93 195 aa18.11■□□□□ 0.49
RCC1-201ENST00000373831 HMMRO75330 724 aa18.1■□□□□ 0.49
RCC1-201ENST00000373831 NFIXQ14938 502 aa18.1■□□□□ 0.49
RCC1-201ENST00000373831 MSL1Q68DK7 614 aa18.1■□□□□ 0.49
RCC1-201ENST00000373831 SH3TC1Q8TE82 1336 aa18.1■□□□□ 0.49
RCC1-201ENST00000373831 NUTM1Q86Y26 1132 aa18.09■□□□□ 0.49
RCC1-201ENST00000373831 FLAD1Q8NFF5 587 aa18.09■□□□□ 0.49
RCC1-201ENST00000373831 SETDB2Q96T68 719 aa18.09■□□□□ 0.49
RCC1-201ENST00000373831 IRS4O14654 1257 aaPredicted RBP18.08■□□□□ 0.49
RCC1-201ENST00000373831 LMBR1LQ6UX01 489 aa18.08■□□□□ 0.49
RCC1-201ENST00000373831 GCC1Q96CN9 775 aa18.08■□□□□ 0.49
RCC1-201ENST00000373831 TNRC6CQ9HCJ0 1690 aaKnown RBP18.08■□□□□ 0.48
RCC1-201ENST00000373831 TM4SF1P30408 202 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms