RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 EIF5P55010 431 aaKnown RBP19.27■□□□□ 0.68
HDAC8-209ENST00000373589 ITPK1Q13572 414 aa19.27■□□□□ 0.68
HDAC8-209ENST00000373589 HLFQ16534 295 aa19.27■□□□□ 0.68
HDAC8-209ENST00000373589 LMBR1LQ6UX01 489 aa19.27■□□□□ 0.68
HDAC8-209ENST00000373589 KLHDC4Q8TBB5 520 aa19.27■□□□□ 0.68
HDAC8-209ENST00000373589 GJD4Q96KN9 370 aaPredicted RBP19.27■□□□□ 0.68
HDAC8-209ENST00000373589 AFF2P51816 1311 aa19.27■□□□□ 0.67
HDAC8-209ENST00000373589 RREB1Q92766 1687 aa19.26■□□□□ 0.67
HDAC8-209ENST00000373589 HSP90AB3PQ58FF7 597 aa19.26■□□□□ 0.67
HDAC8-209ENST00000373589 CASC1Q6TDU7 716 aa19.26■□□□□ 0.67
HDAC8-209ENST00000373589 ERICH6Q7L0X2 663 aa19.26■□□□□ 0.67
HDAC8-209ENST00000373589 CCDC87Q9NVE4 849 aa19.26■□□□□ 0.67
HDAC8-209ENST00000373589 TTC41PQ6P2S7 1318 aa19.26■□□□□ 0.67
HDAC8-209ENST00000373589 CRKLP46109 303 aaKnown RBP19.25■□□□□ 0.67
HDAC8-209ENST00000373589 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.25■□□□□ 0.67
HDAC8-209ENST00000373589 ATRNO75882 1429 aa19.25■□□□□ 0.67
HDAC8-209ENST00000373589 ZNF831Q5JPB2 1677 aa19.25■□□□□ 0.67
HDAC8-209ENST00000373589 ONECUT3O60422 494 aaPredicted RBP19.25■□□□□ 0.67
HDAC8-209ENST00000373589 PCCAP05165 728 aaPredicted RBP19.25■□□□□ 0.67
HDAC8-209ENST00000373589 SIL1Q9H173 461 aa19.25■□□□□ 0.67
HDAC8-209ENST00000373589 MYT1Q01538 1121 aa19.24■□□□□ 0.67
HDAC8-209ENST00000373589 RTL5Q5HYW3 569 aaPredicted RBP19.24■□□□□ 0.67
HDAC8-209ENST00000373589 DZIP3Q86Y13 1208 aaKnown RBP19.24■□□□□ 0.67
HDAC8-209ENST00000373589 SLC4A3P48751 1232 aa19.23■□□□□ 0.67
HDAC8-209ENST00000373589 NLRP10Q86W26 655 aa19.23■□□□□ 0.67
HDAC8-209ENST00000373589 ZBTB38Q8NAP3 1195 aaPredicted RBP19.23■□□□□ 0.67
HDAC8-209ENST00000373589 EAF2Q96CJ1 260 aaPredicted RBP19.23■□□□□ 0.67
HDAC8-209ENST00000373589 ARXQ96QS3 562 aa19.23■□□□□ 0.67
HDAC8-209ENST00000373589 PLA2G12BQ9BX93 195 aa19.23■□□□□ 0.67
HDAC8-209ENST00000373589 IFIT2P09913 472 aaKnown RBP19.22■□□□□ 0.67
HDAC8-209ENST00000373589 AACSQ86V21 672 aa19.22■□□□□ 0.67
HDAC8-209ENST00000373589 TRIM6-TRIM34B2RNG4 842 aa19.22■□□□□ 0.67
HDAC8-209ENST00000373589 GLRX3O76003 335 aaKnown RBP19.22■□□□□ 0.67
HDAC8-209ENST00000373589 ECHDC1Q9NTX5 307 aa19.22■□□□□ 0.67
HDAC8-209ENST00000373589 DAXXQ9UER7 740 aaPredicted RBP19.22■□□□□ 0.67
HDAC8-209ENST00000373589 TRPC5Q9UL62 973 aaPredicted RBP19.22■□□□□ 0.67
HDAC8-209ENST00000373589 TBC1D2BQ9UPU7 963 aa19.22■□□□□ 0.67
HDAC8-209ENST00000373589 CDHR2Q9BYE9 1310 aa19.21■□□□□ 0.67
HDAC8-209ENST00000373589 BECN1Q14457 450 aa19.21■□□□□ 0.67
HDAC8-209ENST00000373589 RILPL2Q969X0 211 aa19.21■□□□□ 0.67
HDAC8-209ENST00000373589 ANKRD36CQ5JPF3 1778 aa19.21■□□□□ 0.67
HDAC8-209ENST00000373589 COL5A3P25940 1745 aaPredicted RBP19.2■□□□□ 0.66
HDAC8-209ENST00000373589 ERC2O15083 957 aa19.2■□□□□ 0.66
HDAC8-209ENST00000373589 CHMLP26374 656 aa19.2■□□□□ 0.66
HDAC8-209ENST00000373589 PTF1AQ7RTS3 328 aa19.2■□□□□ 0.66
HDAC8-209ENST00000373589 ZNF34Q8IZ26 560 aa19.2■□□□□ 0.66
HDAC8-209ENST00000373589 FAM89AQ96GI7 184 aa19.2■□□□□ 0.66
HDAC8-209ENST00000373589 GPATCH3Q96I76 525 aa19.2■□□□□ 0.66
HDAC8-209ENST00000373589 KIF2CQ99661 725 aa19.2■□□□□ 0.66
HDAC8-209ENST00000373589 USP26Q9BXU7 913 aa19.2■□□□□ 0.66
HDAC8-209ENST00000373589 MYH14Q7Z406 1995 aaKnown RBP19.2■□□□□ 0.66
HDAC8-209ENST00000373589 GPTP24298 496 aa19.2■□□□□ 0.66
HDAC8-209ENST00000373589 CHMP3Q9Y3E7 222 aa19.2■□□□□ 0.66
HDAC8-209ENST00000373589 NUP98P52948 1817 aa19.19■□□□□ 0.66
HDAC8-209ENST00000373589 NHSQ6T4R5 1651 aa19.19■□□□□ 0.66
HDAC8-209ENST00000373589 REC8O95072 547 aa19.19■□□□□ 0.66
HDAC8-209ENST00000373589 CSF1RP07333 972 aa19.19■□□□□ 0.66
HDAC8-209ENST00000373589 CAMTA2O94983 1202 aa19.18■□□□□ 0.66
HDAC8-209ENST00000373589 TFCP2Q12800 502 aa19.18■□□□□ 0.66
HDAC8-209ENST00000373589 ATG9AQ7Z3C6 839 aa19.18■□□□□ 0.66
HDAC8-209ENST00000373589 ESYT1Q9BSJ8 1104 aa19.18■□□□□ 0.66
HDAC8-209ENST00000373589 TBC1D2Q9BYX2 928 aa19.18■□□□□ 0.66
HDAC8-209ENST00000373589 CCDC8Q9H0W5 538 aaPredicted RBP19.18■□□□□ 0.66
HDAC8-209ENST00000373589 UBN2Q6ZU65 1347 aa19.18■□□□□ 0.66
HDAC8-209ENST00000373589 CNTROBQ8N137 903 aa19.17■□□□□ 0.66
HDAC8-209ENST00000373589 LINC00116Q8NCU8 138 aa19.17■□□□□ 0.66
HDAC8-209ENST00000373589 TLR7Q9NYK1 1049 aaKnown RBP19.17■□□□□ 0.66
HDAC8-209ENST00000373589 TNNI3KQ59H18 835 aa19.17■□□□□ 0.66
HDAC8-209ENST00000373589 FPGT-TNNI3KV9GXZ4 949 aa19.17■□□□□ 0.66
HDAC8-209ENST00000373589 CIAO1O76071 339 aa19.16■□□□□ 0.66
HDAC8-209ENST00000373589 MAP4K4O95819 1239 aaPredicted RBP19.16■□□□□ 0.66
HDAC8-209ENST00000373589 SEPT12Q8IYM1 358 aa19.16■□□□□ 0.66
HDAC8-209ENST00000373589 SYNE4Q8N205 404 aa19.16■□□□□ 0.66
HDAC8-209ENST00000373589 BTAF1O14981 1849 aa19.15■□□□□ 0.66
HDAC8-209ENST00000373589 EYA2O00167 538 aa19.15■□□□□ 0.66
HDAC8-209ENST00000373589 IL15P40933 162 aaPredicted RBP19.15■□□□□ 0.66
HDAC8-209ENST00000373589 FAM182BQ5T319 152 aa19.15■□□□□ 0.66
HDAC8-209ENST00000373589 TRMT112Q9UI30 125 aaKnown RBP19.15■□□□□ 0.66
HDAC8-209ENST00000373589 CNTNAP4Q9C0A0 1308 aa19.15■□□□□ 0.66
HDAC8-209ENST00000373589 GPR108Q9NPR9 543 aa19.14■□□□□ 0.66
HDAC8-209ENST00000373589 FBXO3Q9UK99 471 aa19.14■□□□□ 0.66
HDAC8-209ENST00000373589 CCDC57Q2TAC2 916 aa19.14■□□□□ 0.65
HDAC8-209ENST00000373589 SNX21Q969T3 373 aa19.14■□□□□ 0.65
HDAC8-209ENST00000373589 ZNF594Q96JF6 807 aaPredicted RBP19.14■□□□□ 0.65
HDAC8-209ENST00000373589 QTRT2Q9H974 415 aaKnown RBP19.14■□□□□ 0.65
HDAC8-209ENST00000373589 DBNLQ9UJU6 430 aaKnown RBP19.14■□□□□ 0.65
HDAC8-209ENST00000373589 IRS4O14654 1257 aaPredicted RBP19.13■□□□□ 0.65
HDAC8-209ENST00000373589 LRRC24Q50LG9 513 aa19.13■□□□□ 0.65
HDAC8-209ENST00000373589 TTLL11Q8NHH1 800 aa19.13■□□□□ 0.65
HDAC8-209ENST00000373589 ANP32EQ9BTT0 268 aa19.13■□□□□ 0.65
HDAC8-209ENST00000373589 CTSWP56202 376 aa19.12■□□□□ 0.65
HDAC8-209ENST00000373589 RC3H1Q5TC82 1133 aaKnown RBP19.12■□□□□ 0.65
HDAC8-209ENST00000373589 EVI5LQ96CN4 794 aa19.12■□□□□ 0.65
HDAC8-209ENST00000373589 AK9Q5TCS8 1911 aa19.12■□□□□ 0.65
HDAC8-209ENST00000373589 KCNQ4P56696 695 aa19.11■□□□□ 0.65
HDAC8-209ENST00000373589 PARP10Q53GL7 1025 aa19.11■□□□□ 0.65
HDAC8-209ENST00000373589 SUSD4Q5VX71 490 aa19.11■□□□□ 0.65
HDAC8-209ENST00000373589 AK7Q96M32 723 aa19.11■□□□□ 0.65
HDAC8-209ENST00000373589 EPB41L2O43491 1005 aaKnown RBP19.11■□□□□ 0.65
HDAC8-209ENST00000373589 PDE8AO60658 829 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms