RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 FXR1P51114 621 aaKnown RBP eCLIP16.98■□□□□ 0.31
HDAC8-204ENST00000373560 USP50Q70EL3 339 aaPredicted RBP16.98■□□□□ 0.31
HDAC8-204ENST00000373560 NPR1P16066 1061 aa16.97■□□□□ 0.31
HDAC8-204ENST00000373560 SETDB2Q96T68 719 aa16.97■□□□□ 0.31
HDAC8-204ENST00000373560 A0A087WZG4 1122 aa16.96■□□□□ 0.31
HDAC8-204ENST00000373560 FAM155AB1AL88 458 aaPredicted RBP16.96■□□□□ 0.31
HDAC8-204ENST00000373560 RNMTO43148 476 aaKnown RBP16.96■□□□□ 0.31
HDAC8-204ENST00000373560 PRKAR2AP13861 404 aaKnown RBP16.96■□□□□ 0.31
HDAC8-204ENST00000373560 EIF6P56537 245 aaKnown RBP16.96■□□□□ 0.31
HDAC8-204ENST00000373560 RTKN2Q8IZC4 609 aa16.96■□□□□ 0.31
HDAC8-204ENST00000373560 GCC1Q96CN9 775 aa16.96■□□□□ 0.31
HDAC8-204ENST00000373560 SIPA1L3O60292 1781 aaPredicted RBP16.95■□□□□ 0.3
HDAC8-204ENST00000373560 NOGQ13253 232 aa16.95■□□□□ 0.3
HDAC8-204ENST00000373560 VSIG10Q8N0Z9 540 aa16.95■□□□□ 0.3
HDAC8-204ENST00000373560 NBPF15Q8N660 670 aa16.95■□□□□ 0.3
HDAC8-204ENST00000373560 TRPA1O75762 1119 aa16.94■□□□□ 0.3
HDAC8-204ENST00000373560 AKAP4Q5JQC9 854 aa16.94■□□□□ 0.3
HDAC8-204ENST00000373560 SULT6B1Q6IMI4 303 aa16.94■□□□□ 0.3
HDAC8-204ENST00000373560 CTU1Q7Z7A3 348 aaKnown RBP16.94■□□□□ 0.3
HDAC8-204ENST00000373560 JDP2Q8WYK2 163 aa16.94■□□□□ 0.3
HDAC8-204ENST00000373560 RNF186Q9NXI6 227 aa16.94■□□□□ 0.3
HDAC8-204ENST00000373560 KLRG2A4D1S0 409 aaPredicted RBP16.93■□□□□ 0.3
HDAC8-204ENST00000373560 PSMD1Q99460 953 aa16.93■□□□□ 0.3
HDAC8-204ENST00000373560 SAGE1Q9NXZ1 904 aa16.93■□□□□ 0.3
HDAC8-204ENST00000373560 A1BGP04217 495 aa16.92■□□□□ 0.3
HDAC8-204ENST00000373560 PIP4K2AP48426 406 aaPredicted RBP16.92■□□□□ 0.3
HDAC8-204ENST00000373560 HIRAP54198 1017 aaPredicted RBP16.92■□□□□ 0.3
HDAC8-204ENST00000373560 HUNKP57058 714 aa16.92■□□□□ 0.3
HDAC8-204ENST00000373560 MIER1Q8N108 512 aa16.92■□□□□ 0.3
HDAC8-204ENST00000373560 ADARB2Q9NS39 739 aaKnown RBP16.92■□□□□ 0.3
HDAC8-204ENST00000373560 GPRC5DQ9NZD1 345 aa16.92■□□□□ 0.3
HDAC8-204ENST00000373560 SZT2Q5T011 3432 aa16.92■□□□□ 0.3
HDAC8-204ENST00000373560 SHTN1A0MZ66 631 aa16.91■□□□□ 0.3
HDAC8-204ENST00000373560 KIF23Q02241 960 aaPredicted RBP16.91■□□□□ 0.3
HDAC8-204ENST00000373560 NBPF5PQ86XG9 351 aaPredicted RBP16.91■□□□□ 0.3
HDAC8-204ENST00000373560 TRPM4Q8TD43 1214 aa16.91■□□□□ 0.3
HDAC8-204ENST00000373560 ZNF496Q96IT1 587 aaPredicted RBP16.91■□□□□ 0.3
HDAC8-204ENST00000373560 ABCC12Q96J65 1359 aa16.9■□□□□ 0.3
HDAC8-204ENST00000373560 STARD3NLO95772 234 aa16.9■□□□□ 0.3
HDAC8-204ENST00000373560 HEG1Q9ULI3 1381 aa16.89■□□□□ 0.3
HDAC8-204ENST00000373560 FAM177BA6PVY3 158 aa16.89■□□□□ 0.29
HDAC8-204ENST00000373560 IL6STP40189 918 aaPredicted RBP16.89■□□□□ 0.29
HDAC8-204ENST00000373560 PLCD3Q8N3E9 789 aa16.89■□□□□ 0.29
HDAC8-204ENST00000373560 LARGE2Q8N3Y3 721 aa16.89■□□□□ 0.29
HDAC8-204ENST00000373560 POTEHQ6S545 545 aa16.88■□□□□ 0.29
HDAC8-204ENST00000373560 DZIP3Q86Y13 1208 aaKnown RBP16.88■□□□□ 0.29
HDAC8-204ENST00000373560 PGAP2Q9UHJ9 254 aa16.88■□□□□ 0.29
HDAC8-204ENST00000373560 HTTP42858 3142 aa16.87■□□□□ 0.29
HDAC8-204ENST00000373560 GMPSP49915 693 aaPredicted RBP16.87■□□□□ 0.29
HDAC8-204ENST00000373560 RGMBQ6NW40 437 aa16.87■□□□□ 0.29
HDAC8-204ENST00000373560 POLR2AP24928 1970 aaKnown RBP16.87■□□□□ 0.29
HDAC8-204ENST00000373560 NPC1L1Q9UHC9 1359 aa16.87■□□□□ 0.29
HDAC8-204ENST00000373560 PAPPA2Q9BXP8 1791 aa16.87■□□□□ 0.29
HDAC8-204ENST00000373560 USP48Q86UV5 1035 aa16.86■□□□□ 0.29
HDAC8-204ENST00000373560 DLL1O00548 723 aa16.85■□□□□ 0.29
HDAC8-204ENST00000373560 SLC24A1O60721 1099 aa16.85■□□□□ 0.29
HDAC8-204ENST00000373560 CSRNP1Q96S65 589 aa16.85■□□□□ 0.29
HDAC8-204ENST00000373560 BRCA2P51587 3418 aa16.84■□□□□ 0.29
HDAC8-204ENST00000373560 IL13P35225 146 aa16.84■□□□□ 0.29
HDAC8-204ENST00000373560 CXCL9Q07325 125 aa16.84■□□□□ 0.29
HDAC8-204ENST00000373560 AOC3Q16853 763 aa16.84■□□□□ 0.29
HDAC8-204ENST00000373560 NIM1KQ8IY84 436 aa16.84■□□□□ 0.29
HDAC8-204ENST00000373560 TCERG1O14776 1098 aaKnown RBP16.83■□□□□ 0.28
HDAC8-204ENST00000373560 MTHFSDQ2M296 383 aaKnown RBP16.83■□□□□ 0.28
HDAC8-204ENST00000373560 CDC37L1Q7L3B6 337 aa16.83■□□□□ 0.28
HDAC8-204ENST00000373560 TTC5Q8N0Z6 440 aa16.83■□□□□ 0.28
HDAC8-204ENST00000373560 RBBP6Q7Z6E9 1792 aaKnown RBP16.82■□□□□ 0.28
HDAC8-204ENST00000373560 PRAMEF22A3QJZ6 481 aa16.82■□□□□ 0.28
HDAC8-204ENST00000373560 PPIP5K2O43314 1243 aa16.82■□□□□ 0.28
HDAC8-204ENST00000373560 KCNQ3O43525 872 aa16.82■□□□□ 0.28
HDAC8-204ENST00000373560 SLC10A3P09131 477 aa16.82■□□□□ 0.28
HDAC8-204ENST00000373560 ALDH1B1P30837 517 aa16.82■□□□□ 0.28
HDAC8-204ENST00000373560 VASPP50552 380 aaPredicted RBP16.82■□□□□ 0.28
HDAC8-204ENST00000373560 RIC1Q4ADV7 1423 aa16.81■□□□□ 0.28
HDAC8-204ENST00000373560 POTEFA5A3E0 1075 aa16.81■□□□□ 0.28
HDAC8-204ENST00000373560 ADM5C9JUS6 153 aa16.81■□□□□ 0.28
HDAC8-204ENST00000373560 ZNF157P51786 506 aaPredicted RBP16.81■□□□□ 0.28
HDAC8-204ENST00000373560 CRY2Q49AN0 593 aa16.81■□□□□ 0.28
HDAC8-204ENST00000373560 ZNF296Q8WUU4 475 aaPredicted RBP16.81■□□□□ 0.28
HDAC8-204ENST00000373560 GBA2Q9HCG7 927 aaPredicted RBP16.81■□□□□ 0.28
HDAC8-204ENST00000373560 NIP7Q9Y221 180 aaKnown RBP eCLIP16.81■□□□□ 0.28
HDAC8-204ENST00000373560 EGFRP00533 1210 aa16.8■□□□□ 0.28
HDAC8-204ENST00000373560 HMOX1P09601 288 aa16.8■□□□□ 0.28
HDAC8-204ENST00000373560 ZNF790Q6PG37 636 aa16.8■□□□□ 0.28
HDAC8-204ENST00000373560 NUTM1Q86Y26 1132 aa16.8■□□□□ 0.28
HDAC8-204ENST00000373560 CENPFP49454 3210 aa16.79■□□□□ 0.28
HDAC8-204ENST00000373560 COLQQ9Y215 455 aaPredicted RBP16.79■□□□□ 0.28
HDAC8-204ENST00000373560 TBC1D8O95759 1140 aa16.78■□□□□ 0.28
HDAC8-204ENST00000373560 HLFQ16534 295 aa16.78■□□□□ 0.28
HDAC8-204ENST00000373560 CDCA8Q53HL2 280 aa16.78■□□□□ 0.28
HDAC8-204ENST00000373560 TPTE2Q6XPS3 522 aa16.78■□□□□ 0.28
HDAC8-204ENST00000373560 ZC3H15Q8WU90 426 aaKnown RBP16.78■□□□□ 0.28
HDAC8-204ENST00000373560 USP16Q9Y5T5 823 aa16.78■□□□□ 0.28
HDAC8-204ENST00000373560 RAD17O75943 681 aa16.77■□□□□ 0.28
HDAC8-204ENST00000373560 CLEC4GQ6UXB4 293 aa16.77■□□□□ 0.28
HDAC8-204ENST00000373560 C3orf67Q6ZVT6 689 aa16.77■□□□□ 0.28
HDAC8-204ENST00000373560 RASAL3Q86YV0 1011 aa16.77■□□□□ 0.28
HDAC8-204ENST00000373560 CCDC102AQ96A19 550 aa16.77■□□□□ 0.28
HDAC8-204ENST00000373560 NUP98P52948 1817 aa16.76■□□□□ 0.27
HDAC8-204ENST00000373560 PPEF1O14829 653 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms