RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 LARGE2Q8N3Y3 721 aa21.16■□□□□ 0.98
TRAPPC3-203ENST00000373163 PRAMEF22A3QJZ6 481 aa21.15■□□□□ 0.98
TRAPPC3-203ENST00000373163 CELF2O95319 508 aaKnown RBP21.14■□□□□ 0.97
TRAPPC3-203ENST00000373163 CRY2Q49AN0 593 aa21.14■□□□□ 0.97
TRAPPC3-203ENST00000373163 SIPA1L3O60292 1781 aaPredicted RBP21.14■□□□□ 0.97
TRAPPC3-203ENST00000373163 SNRPA1P09661 255 aaKnown RBP21.13■□□□□ 0.97
TRAPPC3-203ENST00000373163 HHIPL1Q96JK4 782 aa21.13■□□□□ 0.97
TRAPPC3-203ENST00000373163 U2SURPO15042 1029 aaKnown RBP21.12■□□□□ 0.97
TRAPPC3-203ENST00000373163 GRIPAP1Q4V328 841 aa21.12■□□□□ 0.97
TRAPPC3-203ENST00000373163 NIM1KQ8IY84 436 aa21.12■□□□□ 0.97
TRAPPC3-203ENST00000373163 ADARB2Q9NS39 739 aaKnown RBP21.12■□□□□ 0.97
TRAPPC3-203ENST00000373163 ABCC12Q96J65 1359 aa21.11■□□□□ 0.97
TRAPPC3-203ENST00000373163 NBPF26B4DH59 902 aa21.11■□□□□ 0.97
TRAPPC3-203ENST00000373163 HLFQ16534 295 aa21.11■□□□□ 0.97
TRAPPC3-203ENST00000373163 CIAPIN1Q6FI81 312 aa21.11■□□□□ 0.97
TRAPPC3-203ENST00000373163 NBPF10Q6P3W6 841 aaKnown RBP21.11■□□□□ 0.97
TRAPPC3-203ENST00000373163 NBPF15Q8N660 670 aa21.11■□□□□ 0.97
TRAPPC3-203ENST00000373163 RPGRQ92834 1020 aaKnown RBP21.11■□□□□ 0.97
TRAPPC3-203ENST00000373163 GPRC5DQ9NZD1 345 aa21.11■□□□□ 0.97
TRAPPC3-203ENST00000373163 NUTM1Q86Y26 1132 aa21.09■□□□□ 0.97
TRAPPC3-203ENST00000373163 GLIS2Q9BZE0 524 aaPredicted RBP21.09■□□□□ 0.97
TRAPPC3-203ENST00000373163 NYXQ9GZU5 481 aa21.09■□□□□ 0.97
TRAPPC3-203ENST00000373163 HOXA10P31260 410 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC3-203ENST00000373163 ZNF408Q9H9D4 720 aa21.08■□□□□ 0.97
TRAPPC3-203ENST00000373163 TRPM7Q96QT4 1865 aa21.07■□□□□ 0.96
TRAPPC3-203ENST00000373163 PPEF1O14829 653 aaPredicted RBP21.07■□□□□ 0.96
TRAPPC3-203ENST00000373163 PPIP5K2O43314 1243 aa21.07■□□□□ 0.96
TRAPPC3-203ENST00000373163 SLC51AQ86UW1 340 aa21.07■□□□□ 0.96
TRAPPC3-203ENST00000373163 COL3A1P02461 1466 aaPredicted RBP21.07■□□□□ 0.96
TRAPPC3-203ENST00000373163 TCERG1O14776 1098 aaKnown RBP21.06■□□□□ 0.96
TRAPPC3-203ENST00000373163 NOGQ13253 232 aa21.06■□□□□ 0.96
TRAPPC3-203ENST00000373163 CC2D1BQ5T0F9 858 aaKnown RBP21.06■□□□□ 0.96
TRAPPC3-203ENST00000373163 KIF7Q2M1P5 1343 aa21.05■□□□□ 0.96
TRAPPC3-203ENST00000373163 SOX10P56693 466 aa21.05■□□□□ 0.96
TRAPPC3-203ENST00000373163 AOC3Q16853 763 aa21.05■□□□□ 0.96
TRAPPC3-203ENST00000373163 RBM17Q96I25 401 aaKnown RBP21.05■□□□□ 0.96
TRAPPC3-203ENST00000373163 PHACTR3Q96KR7 559 aa21.05■□□□□ 0.96
TRAPPC3-203ENST00000373163 NPC1L1Q9UHC9 1359 aa21.05■□□□□ 0.96
TRAPPC3-203ENST00000373163 RIC1Q4ADV7 1423 aa21.04■□□□□ 0.96
TRAPPC3-203ENST00000373163 GMPSP49915 693 aaPredicted RBP21.04■□□□□ 0.96
TRAPPC3-203ENST00000373163 CRAMP1Q96RY5 1269 aa21.04■□□□□ 0.96
TRAPPC3-203ENST00000373163 ZIC5Q96T25 663 aa21.04■□□□□ 0.96
TRAPPC3-203ENST00000373163 PGAP2Q9UHJ9 254 aa21.04■□□□□ 0.96
TRAPPC3-203ENST00000373163 CXCL9Q07325 125 aa21.03■□□□□ 0.96
TRAPPC3-203ENST00000373163 ZNRF3Q9ULT6 936 aa21.03■□□□□ 0.96
TRAPPC3-203ENST00000373163 PRKAR2BP31323 418 aa21.02■□□□□ 0.96
TRAPPC3-203ENST00000373163 CDC37L1Q7L3B6 337 aa21.02■□□□□ 0.96
TRAPPC3-203ENST00000373163 ZC3H15Q8WU90 426 aaKnown RBP21.02■□□□□ 0.96
TRAPPC3-203ENST00000373163 TMX4Q9H1E5 349 aaPredicted RBP21.02■□□□□ 0.96
TRAPPC3-203ENST00000373163 VPS33BQ9H267 617 aa21.02■□□□□ 0.96
TRAPPC3-203ENST00000373163 CASP8AP2Q9UKL3 1982 aa21.01■□□□□ 0.95
TRAPPC3-203ENST00000373163 ERVV-1B6SEH8 477 aa21.01■□□□□ 0.95
TRAPPC3-203ENST00000373163 PRPF38BQ5VTL8 546 aaKnown RBP21.01■□□□□ 0.95
TRAPPC3-203ENST00000373163 MCM10Q7L590 875 aa21.01■□□□□ 0.95
TRAPPC3-203ENST00000373163 RTF1Q92541 710 aaKnown RBP21.01■□□□□ 0.95
TRAPPC3-203ENST00000373163 CDHR2Q9BYE9 1310 aa21.01■□□□□ 0.95
TRAPPC3-203ENST00000373163 IBTKQ9P2D0 1353 aaPredicted RBP21■□□□□ 0.95
TRAPPC3-203ENST00000373163 HIRAP54198 1017 aaPredicted RBP21■□□□□ 0.95
TRAPPC3-203ENST00000373163 HUNKP57058 714 aa21■□□□□ 0.95
TRAPPC3-203ENST00000373163 NGEFQ8N5V2 710 aa21■□□□□ 0.95
TRAPPC3-203ENST00000373163 PER1O15534 1290 aaPredicted RBP20.99■□□□□ 0.95
TRAPPC3-203ENST00000373163 GPTP24298 496 aa20.99■□□□□ 0.95
TRAPPC3-203ENST00000373163 BCL2L13Q9BXK5 485 aa20.99■□□□□ 0.95
TRAPPC3-203ENST00000373163 RSPH6AQ9H0K4 717 aa20.99■□□□□ 0.95
TRAPPC3-203ENST00000373163 SAGE1Q9NXZ1 904 aa20.99■□□□□ 0.95
TRAPPC3-203ENST00000373163 MAP3K15Q6ZN16 1313 aa20.99■□□□□ 0.95
TRAPPC3-203ENST00000373163 UBN2Q6ZU65 1347 aa20.99■□□□□ 0.95
TRAPPC3-203ENST00000373163 SUSD4Q5VX71 490 aa20.98■□□□□ 0.95
TRAPPC3-203ENST00000373163 SUPT20HQ8NEM7 779 aa20.98■□□□□ 0.95
TRAPPC3-203ENST00000373163 TRPM4Q8TD43 1214 aa20.98■□□□□ 0.95
TRAPPC3-203ENST00000373163 ATP6V0A2Q9Y487 856 aa20.98■□□□□ 0.95
TRAPPC3-203ENST00000373163 TNRC18O15417 2968 aaPredicted RBP20.98■□□□□ 0.95
TRAPPC3-203ENST00000373163 KIF6Q6ZMV9 814 aa20.97■□□□□ 0.95
TRAPPC3-203ENST00000373163 C3orf67Q6ZVT6 689 aa20.97■□□□□ 0.95
TRAPPC3-203ENST00000373163 FAM155AB1AL88 458 aaPredicted RBP20.96■□□□□ 0.95
TRAPPC3-203ENST00000373163 USP48Q86UV5 1035 aa20.96■□□□□ 0.95
TRAPPC3-203ENST00000373163 RTFDC1Q9BY42 306 aaPredicted RBP20.96■□□□□ 0.95
TRAPPC3-203ENST00000373163 RAD17O75943 681 aa20.95■□□□□ 0.94
TRAPPC3-203ENST00000373163 NTSR2O95665 410 aa20.95■□□□□ 0.94
TRAPPC3-203ENST00000373163 DCTN1Q14203 1278 aa20.95■□□□□ 0.94
TRAPPC3-203ENST00000373163 TNIP1Q15025 636 aa20.95■□□□□ 0.94
TRAPPC3-203ENST00000373163 RGMBQ6NW40 437 aa20.95■□□□□ 0.94
TRAPPC3-203ENST00000373163 TTLL7Q6ZT98 887 aa20.95■□□□□ 0.94
TRAPPC3-203ENST00000373163 CNGB1Q14028 1251 aaPredicted RBP20.94■□□□□ 0.94
TRAPPC3-203ENST00000373163 ZBTB3Q9H5J0 574 aa20.94■□□□□ 0.94
TRAPPC3-203ENST00000373163 CNOT7Q9UIV1 285 aaKnown RBP20.94■□□□□ 0.94
TRAPPC3-203ENST00000373163 CLSPNQ9HAW4 1339 aa20.94■□□□□ 0.94
TRAPPC3-203ENST00000373163 SHTN1A0MZ66 631 aa20.93■□□□□ 0.94
TRAPPC3-203ENST00000373163 H7C1D1 291 aa20.93■□□□□ 0.94
TRAPPC3-203ENST00000373163 KIF23Q02241 960 aaPredicted RBP20.93■□□□□ 0.94
TRAPPC3-203ENST00000373163 KIAA2012Q0VF49 1180 aa20.93■□□□□ 0.94
TRAPPC3-203ENST00000373163 DLK2Q6UY11 383 aa20.93■□□□□ 0.94
TRAPPC3-203ENST00000373163 DPP8Q6V1X1 898 aaPredicted RBP20.93■□□□□ 0.94
TRAPPC3-203ENST00000373163 CCDC102AQ96A19 550 aa20.93■□□□□ 0.94
TRAPPC3-203ENST00000373163 NLRP3Q96P20 1036 aa20.93■□□□□ 0.94
TRAPPC3-203ENST00000373163 RNF186Q9NXI6 227 aa20.93■□□□□ 0.94
TRAPPC3-203ENST00000373163 TRPA1O75762 1119 aa20.92■□□□□ 0.94
TRAPPC3-203ENST00000373163 TAF7Q15545 349 aaPredicted RBP20.92■□□□□ 0.94
TRAPPC3-203ENST00000373163 MICALL2Q8IY33 904 aa20.92■□□□□ 0.94
TRAPPC3-203ENST00000373163 ZNF34Q8IZ26 560 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms