RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 ZSCAN31Q96LW9 406 aaPredicted RBP18.75■□□□□ 0.59
PABPC4-202ENST00000372857 PHAXQ9H814 394 aaKnown RBP18.75■□□□□ 0.59
PABPC4-202ENST00000372857 RAB11FIP3O75154 756 aa18.74■□□□□ 0.59
PABPC4-202ENST00000372857 PLCD3Q8N3E9 789 aa18.74■□□□□ 0.59
PABPC4-202ENST00000372857 KIF1BPQ96EK5 621 aa18.74■□□□□ 0.59
PABPC4-202ENST00000372857 SPATA32Q96LK8 384 aa18.74■□□□□ 0.59
PABPC4-202ENST00000372857 ZSWIM6Q9HCJ5 1215 aa18.74■□□□□ 0.59
PABPC4-202ENST00000372857 ARHGEF10O15013 1369 aa18.74■□□□□ 0.59
PABPC4-202ENST00000372857 XRN1Q8IZH2 1706 aaKnown RBP18.74■□□□□ 0.59
PABPC4-202ENST00000372857 OVOS2A0A0J9YW53 1432 aa18.74■□□□□ 0.59
PABPC4-202ENST00000372857 OVOS2Q6IE36 1432 aa18.74■□□□□ 0.59
PABPC4-202ENST00000372857 NR1I2O75469 434 aa18.74■□□□□ 0.59
PABPC4-202ENST00000372857 KCNJ4P48050 445 aa18.74■□□□□ 0.59
PABPC4-202ENST00000372857 OS9Q13438 667 aaPredicted RBP18.74■□□□□ 0.59
PABPC4-202ENST00000372857 ZNF215Q9UL58 517 aaPredicted RBP18.73■□□□□ 0.59
PABPC4-202ENST00000372857 MORC2Q9Y6X9 1032 aaPredicted RBP18.73■□□□□ 0.59
PABPC4-202ENST00000372857 KMT5BQ4FZB7 885 aa18.73■□□□□ 0.59
PABPC4-202ENST00000372857 BICD2Q8TD16 824 aa18.73■□□□□ 0.59
PABPC4-202ENST00000372857 MON2Q7Z3U7 1717 aa18.72■□□□□ 0.59
PABPC4-202ENST00000372857 NBPF7P0C2Y1 421 aaPredicted RBP18.72■□□□□ 0.59
PABPC4-202ENST00000372857 TECPR2O15040 1411 aa18.72■□□□□ 0.59
PABPC4-202ENST00000372857 STK3Q13188 491 aa18.72■□□□□ 0.59
PABPC4-202ENST00000372857 TDRD7Q8NHU6 1098 aaKnown RBP18.72■□□□□ 0.59
PABPC4-202ENST00000372857 SIRT1Q96EB6 747 aa18.72■□□□□ 0.59
PABPC4-202ENST00000372857 C3P01024 1663 aa18.72■□□□□ 0.59
PABPC4-202ENST00000372857 NPHP1O15259 732 aa18.71■□□□□ 0.59
PABPC4-202ENST00000372857 POLA2Q14181 598 aa18.71■□□□□ 0.59
PABPC4-202ENST00000372857 TRMT1Q9NXH9 659 aaKnown RBP18.71■□□□□ 0.59
PABPC4-202ENST00000372857 TAF3Q5VWG9 929 aa18.71■□□□□ 0.59
PABPC4-202ENST00000372857 CLSTN2Q9H4D0 955 aa18.71■□□□□ 0.59
PABPC4-202ENST00000372857 TTC21AQ8NDW8 1320 aa18.71■□□□□ 0.59
PABPC4-202ENST00000372857 LARP1Q6PKG0 1096 aaKnown RBP18.71■□□□□ 0.59
PABPC4-202ENST00000372857 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.71■□□□□ 0.59
PABPC4-202ENST00000372857 IL17REQ8NFR9 667 aa18.71■□□□□ 0.59
PABPC4-202ENST00000372857 LEO1Q8WVC0 666 aaPredicted RBP18.71■□□□□ 0.59
PABPC4-202ENST00000372857 RUFY2Q8WXA3 655 aa18.71■□□□□ 0.59
PABPC4-202ENST00000372857 ST7Q9NRC1 585 aa18.71■□□□□ 0.59
PABPC4-202ENST00000372857 TMEM51Q9NW97 253 aa18.71■□□□□ 0.59
PABPC4-202ENST00000372857 ELP1O95163 1332 aa18.71■□□□□ 0.58
PABPC4-202ENST00000372857 TERF2Q15554 542 aa18.7■□□□□ 0.58
PABPC4-202ENST00000372857 KRT222Q8N1A0 295 aa18.7■□□□□ 0.58
PABPC4-202ENST00000372857 PEAK1Q9H792 1746 aa18.7■□□□□ 0.58
PABPC4-202ENST00000372857 DDX19AQ9NUU7 478 aaKnown RBP18.7■□□□□ 0.58
PABPC4-202ENST00000372857 PLEKHG1Q9ULL1 1385 aa18.7■□□□□ 0.58
PABPC4-202ENST00000372857 ERICH4A6NGS2 130 aa18.7■□□□□ 0.58
PABPC4-202ENST00000372857 VGLL3A8MV65 326 aa18.7■□□□□ 0.58
PABPC4-202ENST00000372857 ZKSCAN1P17029 563 aaPredicted RBP18.7■□□□□ 0.58
PABPC4-202ENST00000372857 LRRC59Q96AG4 307 aaKnown RBP18.7■□□□□ 0.58
PABPC4-202ENST00000372857 RBM8AQ9Y5S9 174 aaKnown RBP18.7■□□□□ 0.58
PABPC4-202ENST00000372857 HOXC9P31274 260 aa18.69■□□□□ 0.58
PABPC4-202ENST00000372857 ELF2Q15723 593 aa18.69■□□□□ 0.58
PABPC4-202ENST00000372857 SCAND2PQ9GZW5 306 aaPredicted RBP18.69■□□□□ 0.58
PABPC4-202ENST00000372857 CEP170BQ9Y4F5 1589 aaPredicted RBP18.69■□□□□ 0.58
PABPC4-202ENST00000372857 NPHP3Q7Z494 1330 aa18.69■□□□□ 0.58
PABPC4-202ENST00000372857 GLRX3O76003 335 aaKnown RBP18.69■□□□□ 0.58
PABPC4-202ENST00000372857 LRRC8AQ8IWT6 810 aa18.69■□□□□ 0.58
PABPC4-202ENST00000372857 PGBD1Q96JS3 809 aa18.69■□□□□ 0.58
PABPC4-202ENST00000372857 FLT4P35916 1363 aa18.69■□□□□ 0.58
PABPC4-202ENST00000372857 A0A087WWV3 80 aa18.68■□□□□ 0.58
PABPC4-202ENST00000372857 NECTIN1Q15223 517 aa18.68■□□□□ 0.58
PABPC4-202ENST00000372857 CREB3L3Q68CJ9 461 aa18.68■□□□□ 0.58
PABPC4-202ENST00000372857 ZNF397Q8NF99 534 aaPredicted RBP18.68■□□□□ 0.58
PABPC4-202ENST00000372857 TM6SF1Q9BZW5 370 aa18.68■□□□□ 0.58
PABPC4-202ENST00000372857 SETD1BQ9UPS6 1966 aaKnown RBP18.68■□□□□ 0.58
PABPC4-202ENST00000372857 KCNQ3O43525 872 aa18.68■□□□□ 0.58
PABPC4-202ENST00000372857 PTPN14Q15678 1187 aa18.68■□□□□ 0.58
PABPC4-202ENST00000372857 HDGFL1Q5TGJ6 251 aa18.68■□□□□ 0.58
PABPC4-202ENST00000372857 FBXO38Q6PIJ6 1188 aa18.68■□□□□ 0.58
PABPC4-202ENST00000372857 FILIP1Q7Z7B0 1213 aa18.68■□□□□ 0.58
PABPC4-202ENST00000372857 FAM227BQ96M60 508 aa18.68■□□□□ 0.58
PABPC4-202ENST00000372857 FAM208AQ9UK61 1670 aaKnown RBP18.68■□□□□ 0.58
PABPC4-202ENST00000372857 ITSN1Q15811 1721 aa18.68■□□□□ 0.58
PABPC4-202ENST00000372857 USP16Q9Y5T5 823 aa18.68■□□□□ 0.58
PABPC4-202ENST00000372857 TAF6LQ9Y6J9 622 aa18.68■□□□□ 0.58
PABPC4-202ENST00000372857 CCDC171Q6TFL3 1326 aa18.67■□□□□ 0.58
PABPC4-202ENST00000372857 GOLGA6L19H0YKK7 550 aa18.67■□□□□ 0.58
PABPC4-202ENST00000372857 SKILP12757 684 aa18.67■□□□□ 0.58
PABPC4-202ENST00000372857 CEBPZQ03701 1054 aaKnown RBP18.67■□□□□ 0.58
PABPC4-202ENST00000372857 ESCO1Q5FWF5 840 aa18.67■□□□□ 0.58
PABPC4-202ENST00000372857 LGR6Q9HBX8 967 aa18.67■□□□□ 0.58
PABPC4-202ENST00000372857 GNAT3A8MTJ3 354 aa18.67■□□□□ 0.58
PABPC4-202ENST00000372857 PDCP20941 246 aa18.67■□□□□ 0.58
PABPC4-202ENST00000372857 C11orf57Q6ZUT1 292 aaPredicted RBP18.67■□□□□ 0.58
PABPC4-202ENST00000372857 DDX11Q96FC9 970 aa18.67■□□□□ 0.58
PABPC4-202ENST00000372857 RBM43Q6ZSC3 357 aaKnown RBP18.66■□□□□ 0.58
PABPC4-202ENST00000372857 THEMISQ8N1K5 641 aaPredicted RBP18.66■□□□□ 0.58
PABPC4-202ENST00000372857 MAP3K5Q99683 1374 aa18.66■□□□□ 0.58
PABPC4-202ENST00000372857 AKAP12Q02952 1782 aa18.66■□□□□ 0.58
PABPC4-202ENST00000372857 RGPD1P0DJD0 1748 aa18.65■□□□□ 0.58
PABPC4-202ENST00000372857 UBR1Q8IWV7 1749 aa18.65■□□□□ 0.58
PABPC4-202ENST00000372857 SBNO1A3KN83 1393 aa18.65■□□□□ 0.58
PABPC4-202ENST00000372857 CDK11BP21127 795 aaKnown RBP18.65■□□□□ 0.58
PABPC4-202ENST00000372857 TAF7Q15545 349 aaPredicted RBP18.65■□□□□ 0.58
PABPC4-202ENST00000372857 CLASRPQ8N2M8 674 aaKnown RBP18.65■□□□□ 0.58
PABPC4-202ENST00000372857 FBXW7Q969H0 707 aa18.65■□□□□ 0.58
PABPC4-202ENST00000372857 TBX22Q9Y458 520 aa18.65■□□□□ 0.58
PABPC4-202ENST00000372857 RBM6P78332 1123 aaKnown RBP18.64■□□□□ 0.57
PABPC4-202ENST00000372857 SYTL4Q96C24 671 aaPredicted RBP18.64■□□□□ 0.57
PABPC4-202ENST00000372857 PA2G4Q9UQ80 394 aaKnown RBP18.64■□□□□ 0.57
PABPC4-202ENST00000372857 SLC27A2O14975 620 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms