RNA–Protein interactions for RNA: ENST00000372731.8

SPTAN1-202, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-202ENST00000372731 KIF1BPQ96EK5 621 aa10.56□□□□□ -0.72
SPTAN1-202ENST00000372731 ZNF408Q9H9D4 720 aa10.55□□□□□ -0.72
SPTAN1-202ENST00000372731 ATP6V1AP38606 617 aa10.55□□□□□ -0.72
SPTAN1-202ENST00000372731 KIF22Q14807 665 aa10.55□□□□□ -0.72
SPTAN1-202ENST00000372731 KLHL10Q6JEL2 608 aa10.55□□□□□ -0.72
SPTAN1-202ENST00000372731 GJA3Q9Y6H8 435 aa10.55□□□□□ -0.72
SPTAN1-202ENST00000372731 ANKRD30BQ9BXX2 1392 aa10.55□□□□□ -0.72
SPTAN1-202ENST00000372731 CRACR2AQ9BSW2 395 aa10.55□□□□□ -0.72
SPTAN1-202ENST00000372731 TMOD4Q9NZQ9 345 aa10.55□□□□□ -0.72
SPTAN1-202ENST00000372731 EMILIN1Q9Y6C2 1016 aa10.55□□□□□ -0.72
SPTAN1-202ENST00000372731 PRKCSHP14314 528 aaPredicted RBP10.55□□□□□ -0.72
SPTAN1-202ENST00000372731 STK32BQ9NY57 414 aa10.55□□□□□ -0.72
SPTAN1-202ENST00000372731 TCIRG1Q13488 830 aa10.55□□□□□ -0.72
SPTAN1-202ENST00000372731 IFI16Q16666 785 aaKnown RBP10.55□□□□□ -0.72
SPTAN1-202ENST00000372731 KRT28Q7Z3Y7 464 aa10.55□□□□□ -0.72
SPTAN1-202ENST00000372731 CHD1LQ86WJ1 897 aa10.55□□□□□ -0.72
SPTAN1-202ENST00000372731 DDX11Q96FC9 970 aa10.55□□□□□ -0.72
SPTAN1-202ENST00000372731 HAUS2Q9NVX0 235 aa10.55□□□□□ -0.72
SPTAN1-202ENST00000372731 WWC3Q9ULE0 1092 aa10.55□□□□□ -0.72
SPTAN1-202ENST00000372731 TRAK2O60296 914 aa10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 CWC25Q9NXE8 425 aaPredicted RBP10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 KRT13P13646 458 aa10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 MTIF2P46199 727 aaKnown RBP10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 C8orf76Q96K31 380 aa10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 NUP88Q99567 741 aaPredicted RBP10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 GBP3Q9H0R5 595 aa10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 NUP62CLQ9H1M0 184 aa10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 CCDC102AQ96A19 550 aa10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 NAA15Q9BXJ9 866 aaKnown RBP10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 TAF7Q15545 349 aaPredicted RBP10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 EYA3Q99504 573 aa10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 TCHPQ9BT92 498 aa10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 GOLGA8AA7E2F4 631 aa10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 GOLGA8BA8MQT2 603 aa10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 KIF5CO60282 957 aa10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 BBXQ8WY36 941 aaPredicted RBP10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 SUPT6HQ7KZ85 1726 aaKnown RBP10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 F8W031 263 aaPredicted RBP10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 FOXO3O43524 673 aa10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 DPH6Q7L8W6 267 aa10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 RIOK3O14730 519 aaKnown RBP10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 PAFAH1B1P43034 410 aa10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 FAM212AQ96EL1 285 aa10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 BCCIPQ9P287 314 aaKnown RBP eCLIP10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 CEP83Q9Y592 693 aa10.54□□□□□ -0.72
SPTAN1-202ENST00000372731 C20orf194Q5TEA3 1177 aa10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 TIGD1Q96MW7 591 aa10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 HAUS7Q99871 368 aa10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 C6orf163Q5TEZ5 329 aa10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 DUSP27Q5VZP5 1158 aa10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 MMRN2Q9H8L6 949 aa10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 TMCO5BA8MYB1 307 aa10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 CASQ1P31415 396 aa10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 MFSD6Q6ZSS7 791 aa10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.53□□□□□ -0.722e-6■■□□□ 13.9
SPTAN1-202ENST00000372731 PPFIA3O75145 1194 aa10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 PRPF4BQ13523 1007 aaKnown RBP10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 SMARCC2Q8TAQ2 1214 aa10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 HOOK2Q96ED9 719 aa10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 CACYBPQ9HB71 228 aaKnown RBP10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 IVNS1ABPQ9Y6Y0 642 aa10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 TROQ12816 1431 aaPredicted RBP10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 TMPOP42166 694 aaKnown RBP10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 EIF6P56537 245 aaKnown RBP10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 HFM1A2PYH4 1435 aa10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 GLRX3O76003 335 aaKnown RBP10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 C6orf50Q9HD87 102 aa10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 CCDC61Q9Y6R9 512 aa10.53□□□□□ -0.72
SPTAN1-202ENST00000372731 NAIPQ13075 1403 aa10.52□□□□□ -0.72
SPTAN1-202ENST00000372731 SLC8A3P57103 927 aa10.52□□□□□ -0.72
SPTAN1-202ENST00000372731 KIAA1524Q8TCG1 905 aa10.52□□□□□ -0.72
SPTAN1-202ENST00000372731 TNPO1Q92973 898 aaKnown RBP10.52□□□□□ -0.72
SPTAN1-202ENST00000372731 PLB1Q6P1J6 1458 aa10.52□□□□□ -0.72
SPTAN1-202ENST00000372731 FANCIQ9NVI1 1328 aa10.52□□□□□ -0.72
SPTAN1-202ENST00000372731 YEATS4O95619 227 aa10.52□□□□□ -0.73
SPTAN1-202ENST00000372731 PICALMQ13492 652 aa10.52□□□□□ -0.73
SPTAN1-202ENST00000372731 NLRP3Q96P20 1036 aa10.52□□□□□ -0.73
SPTAN1-202ENST00000372731 CIZ1Q9ULV3 898 aaPredicted RBP10.52□□□□□ -0.73
SPTAN1-202ENST00000372731 PHF8Q9UPP1 1060 aa10.52□□□□□ -0.73
SPTAN1-202ENST00000372731 CCDC83Q8IWF9 413 aa10.52□□□□□ -0.73
SPTAN1-202ENST00000372731 GOLGA1Q92805 767 aa10.52□□□□□ -0.73
SPTAN1-202ENST00000372731 RTCBQ9Y3I0 505 aaKnown RBP10.52□□□□□ -0.73
SPTAN1-202ENST00000372731 MRE11P49959 708 aa10.52□□□□□ -0.73
SPTAN1-202ENST00000372731 ARHGEF6Q15052 776 aa10.52□□□□□ -0.73
SPTAN1-202ENST00000372731 NACA2Q9H009 215 aa10.52□□□□□ -0.73
SPTAN1-202ENST00000372731 IQCGQ9H095 443 aaKnown RBP10.52□□□□□ -0.73
SPTAN1-202ENST00000372731 CCDC8Q9H0W5 538 aaPredicted RBP10.52□□□□□ -0.73
SPTAN1-202ENST00000372731 TIAM1Q13009 1591 aa10.52□□□□□ -0.73
SPTAN1-202ENST00000372731 M0QZ92 97 aa10.52□□□□□ -0.73
SPTAN1-202ENST00000372731 GIMAP7Q8NHV1 300 aa10.52□□□□□ -0.73
SPTAN1-202ENST00000372731 BOLA2Q9H3K6 86 aa10.52□□□□□ -0.73
SPTAN1-202ENST00000372731 EXOC1Q9NV70 894 aa10.52□□□□□ -0.73
SPTAN1-202ENST00000372731 ADGRF5Q8IZF2 1346 aa10.51□□□□□ -0.73
SPTAN1-202ENST00000372731 SPDYE3A6NKU9 549 aa10.51□□□□□ -0.73
SPTAN1-202ENST00000372731 PCF11O94913 1555 aaKnown RBP10.51□□□□□ -0.73
SPTAN1-202ENST00000372731 ZC3H12CQ9C0D7 883 aaKnown RBP10.51□□□□□ -0.73
SPTAN1-202ENST00000372731 ZSCAN12O43309 604 aa10.51□□□□□ -0.73
SPTAN1-202ENST00000372731 TMEM67Q5HYA8 995 aa10.51□□□□□ -0.73
SPTAN1-202ENST00000372731 SHTN1A0MZ66 631 aa10.51□□□□□ -0.73
SPTAN1-202ENST00000372731 CHRNA2Q15822 529 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms