RNA–Protein interactions for RNA: ENST00000371558.6

UBE2A-202, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBE2A, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-202ENST00000371558 RTCBQ9Y3I0 505 aaKnown RBP17.89■□□□□ 0.45
UBE2A-202ENST00000371558 PHF14O94880 888 aa17.88■□□□□ 0.45
UBE2A-202ENST00000371558 PDE4AP27815 886 aa17.88■□□□□ 0.45
UBE2A-202ENST00000371558 POLA2Q14181 598 aa17.88■□□□□ 0.45
UBE2A-202ENST00000371558 TXNRD1Q16881 649 aa17.88■□□□□ 0.45
UBE2A-202ENST00000371558 SLC27A3Q5K4L6 730 aa17.88■□□□□ 0.45
UBE2A-202ENST00000371558 MTX1Q13505 466 aa17.88■□□□□ 0.45
UBE2A-202ENST00000371558 FAM89AQ96GI7 184 aa17.88■□□□□ 0.45
UBE2A-202ENST00000371558 UBN2Q6ZU65 1347 aa17.88■□□□□ 0.45
UBE2A-202ENST00000371558 SCN7AQ01118 1682 aa17.87■□□□□ 0.45
UBE2A-202ENST00000371558 C4AP0C0L4 1744 aa17.87■□□□□ 0.45
UBE2A-202ENST00000371558 UBR3Q6ZT12 1888 aa17.87■□□□□ 0.45
UBE2A-202ENST00000371558 SMARCA5O60264 1052 aaPredicted RBP17.87■□□□□ 0.45
UBE2A-202ENST00000371558 PROM2Q8N271 834 aa17.87■□□□□ 0.45
UBE2A-202ENST00000371558 FAM177BA6PVY3 158 aa17.86■□□□□ 0.45
UBE2A-202ENST00000371558 SURF6O75683 361 aaKnown RBP17.86■□□□□ 0.45
UBE2A-202ENST00000371558 ILDR1Q86SU0 546 aaPredicted RBP17.86■□□□□ 0.45
UBE2A-202ENST00000371558 ZNF34Q8IZ26 560 aa17.86■□□□□ 0.45
UBE2A-202ENST00000371558 ZBTB47Q9UFB7 747 aaPredicted RBP17.86■□□□□ 0.45
UBE2A-202ENST00000371558 SYNE4Q8N205 404 aa17.86■□□□□ 0.45
UBE2A-202ENST00000371558 SRP68Q9UHB9 627 aaKnown RBP17.86■□□□□ 0.45
UBE2A-202ENST00000371558 ZNF652Q9Y2D9 606 aa17.86■□□□□ 0.45
UBE2A-202ENST00000371558 PCCAP05165 728 aaPredicted RBP17.85■□□□□ 0.45
UBE2A-202ENST00000371558 USPL1Q5W0Q7 1092 aa17.85■□□□□ 0.45
UBE2A-202ENST00000371558 ZBTB38Q8NAP3 1195 aaPredicted RBP17.85■□□□□ 0.45
UBE2A-202ENST00000371558 ARHGEF1Q92888 912 aaKnown RBP17.85■□□□□ 0.45
UBE2A-202ENST00000371558 TRMT112Q9UI30 125 aaKnown RBP17.85■□□□□ 0.45
UBE2A-202ENST00000371558 PA2G4Q9UQ80 394 aaKnown RBP17.85■□□□□ 0.45
UBE2A-202ENST00000371558 NIP7Q9Y221 180 aaKnown RBP eCLIP17.85■□□□□ 0.45
UBE2A-202ENST00000371558 CHMP3Q9Y3E7 222 aa17.85■□□□□ 0.45
UBE2A-202ENST00000371558 PLSCR1O15162 318 aa17.84■□□□□ 0.45
UBE2A-202ENST00000371558 LMBR1LQ6UX01 489 aa17.84■□□□□ 0.45
UBE2A-202ENST00000371558 ZPR1O75312 459 aa17.84■□□□□ 0.45
UBE2A-202ENST00000371558 FOXO4P98177 505 aa17.84■□□□□ 0.45
UBE2A-202ENST00000371558 SUSD4Q5VX71 490 aa17.84■□□□□ 0.45
UBE2A-202ENST00000371558 NARFQ9UHQ1 456 aa17.84■□□□□ 0.45
UBE2A-202ENST00000371558 MYH3P11055 1940 aa17.84■□□□□ 0.45
UBE2A-202ENST00000371558 RABL6Q3YEC7 729 aaPredicted RBP17.83■□□□□ 0.44
UBE2A-202ENST00000371558 TRAPPC3LQ5T215 181 aa17.83■□□□□ 0.44
UBE2A-202ENST00000371558 C16orf71Q8IYS4 520 aaPredicted RBP17.83■□□□□ 0.44
UBE2A-202ENST00000371558 KLHDC4Q8TBB5 520 aa17.83■□□□□ 0.44
UBE2A-202ENST00000371558 RFC4P35249 363 aa17.82■□□□□ 0.44
UBE2A-202ENST00000371558 OS9Q13438 667 aaPredicted RBP17.82■□□□□ 0.44
UBE2A-202ENST00000371558 CLEC4GQ6UXB4 293 aa17.82■□□□□ 0.44
UBE2A-202ENST00000371558 BICDL1Q6ZP65 573 aa17.82■□□□□ 0.44
UBE2A-202ENST00000371558 LRRCC1Q9C099 1032 aa17.82■□□□□ 0.44
UBE2A-202ENST00000371558 BCL2L12Q9HB09 334 aa17.82■□□□□ 0.44
UBE2A-202ENST00000371558 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.82■□□□□ 0.44
UBE2A-202ENST00000371558 SIL1Q9H173 461 aa17.82■□□□□ 0.44
UBE2A-202ENST00000371558 PARP10Q53GL7 1025 aa17.81■□□□□ 0.44
UBE2A-202ENST00000371558 CCDC85AQ96PX6 553 aaPredicted RBP17.81■□□□□ 0.44
UBE2A-202ENST00000371558 CDHR2Q9BYE9 1310 aa17.8■□□□□ 0.44
UBE2A-202ENST00000371558 IRS4O14654 1257 aaPredicted RBP17.8■□□□□ 0.44
UBE2A-202ENST00000371558 TBC1D9BQ66K14 1250 aa17.8■□□□□ 0.44
UBE2A-202ENST00000371558 UTP14AQ9BVJ6 771 aaKnown RBP17.8■□□□□ 0.44
UBE2A-202ENST00000371558 IL1RAPL2Q9NP60 686 aa17.8■□□□□ 0.44
UBE2A-202ENST00000371558 OTUD7AQ8TE49 926 aaPredicted RBP17.8■□□□□ 0.44
UBE2A-202ENST00000371558 NOP58Q9Y2X3 529 aaKnown RBP17.8■□□□□ 0.44
UBE2A-202ENST00000371558 RGPD3A6NKT7 1758 aaPredicted RBP17.79■□□□□ 0.44
UBE2A-202ENST00000371558 RGPD4Q7Z3J3 1758 aa17.79■□□□□ 0.44
UBE2A-202ENST00000371558 USP42Q9H9J4 1324 aaKnown RBP17.79■□□□□ 0.44
UBE2A-202ENST00000371558 RAB11FIP3O75154 756 aa17.79■□□□□ 0.44
UBE2A-202ENST00000371558 RFX5P48382 616 aaPredicted RBP17.79■□□□□ 0.44
UBE2A-202ENST00000371558 HSP90AB4PQ58FF6 505 aa17.79■□□□□ 0.44
UBE2A-202ENST00000371558 TUBGCP6Q96RT7 1819 aa17.79■□□□□ 0.44
UBE2A-202ENST00000371558 SH3TC1Q8TE82 1336 aa17.79■□□□□ 0.44
UBE2A-202ENST00000371558 DDX60Q8IY21 1712 aaKnown RBP17.78■□□□□ 0.44
UBE2A-202ENST00000371558 NTSR2O95665 410 aa17.78■□□□□ 0.44
UBE2A-202ENST00000371558 PTPN12Q05209 780 aaKnown RBP17.78■□□□□ 0.44
UBE2A-202ENST00000371558 ZNF827Q17R98 1081 aa17.78■□□□□ 0.44
UBE2A-202ENST00000371558 NUTM1Q86Y26 1132 aa17.78■□□□□ 0.44
UBE2A-202ENST00000371558 RHPN1Q8TCX5 695 aa17.78■□□□□ 0.44
UBE2A-202ENST00000371558 TSHZ2Q9NRE2 1034 aa17.78■□□□□ 0.44
UBE2A-202ENST00000371558 ADRA2BP18089 450 aa17.78■□□□□ 0.44
UBE2A-202ENST00000371558 EN1Q05925 392 aaPredicted RBP17.78■□□□□ 0.44
UBE2A-202ENST00000371558 G3BP1Q13283 466 aaKnown RBP eCLIP17.78■□□□□ 0.44
UBE2A-202ENST00000371558 KIF1BPQ96EK5 621 aa17.78■□□□□ 0.44
UBE2A-202ENST00000371558 PLA2G12BQ9BX93 195 aa17.78■□□□□ 0.44
UBE2A-202ENST00000371558 HCLS1P14317 486 aaPredicted RBP17.77■□□□□ 0.43
UBE2A-202ENST00000371558 SSFA2P28290 1259 aa17.77■□□□□ 0.43
UBE2A-202ENST00000371558 FAM161AQ3B820 660 aa17.77■□□□□ 0.43
UBE2A-202ENST00000371558 TFCP2L1Q9NZI6 479 aa17.77■□□□□ 0.43
UBE2A-202ENST00000371558 EZH2Q15910 746 aaKnown RBP17.76■□□□□ 0.43
UBE2A-202ENST00000371558 PLEKHM2Q8IWE5 1019 aa17.76■□□□□ 0.43
UBE2A-202ENST00000371558 SETDB2Q96T68 719 aa17.76■□□□□ 0.43
UBE2A-202ENST00000371558 COPRSQ9NQ92 184 aa17.76■□□□□ 0.43
UBE2A-202ENST00000371558 LAMB2P55268 1798 aa17.76■□□□□ 0.43
UBE2A-202ENST00000371558 COL24A1Q17RW2 1714 aa17.76■□□□□ 0.43
UBE2A-202ENST00000371558 RGL2O15211 777 aa17.75■□□□□ 0.43
UBE2A-202ENST00000371558 PDE8AO60658 829 aa17.75■□□□□ 0.43
UBE2A-202ENST00000371558 CTSWP56202 376 aa17.75■□□□□ 0.43
UBE2A-202ENST00000371558 ZNF594Q96JF6 807 aaPredicted RBP17.75■□□□□ 0.43
UBE2A-202ENST00000371558 CASZ1Q86V15 1759 aa17.75■□□□□ 0.43
UBE2A-202ENST00000371558 HMGB2P26583 209 aaKnown RBP17.75■□□□□ 0.43
UBE2A-202ENST00000371558 CCDC57Q2TAC2 916 aa17.75■□□□□ 0.43
UBE2A-202ENST00000371558 ERC1Q8IUD2 1116 aa17.75■□□□□ 0.43
UBE2A-202ENST00000371558 TTLL11Q8NHH1 800 aa17.75■□□□□ 0.43
UBE2A-202ENST00000371558 SASH1O94885 1247 aa17.74■□□□□ 0.43
UBE2A-202ENST00000371558 CSF1RP07333 972 aa17.74■□□□□ 0.43
UBE2A-202ENST00000371558 AKT1S1Q96B36 256 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms