RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 GPT2Q8TD30 523 aa34.85■■■■□ 3.17
SSBP3-204ENST00000371320 A0A087WZG4 1122 aa34.84■■■■□ 3.17
SSBP3-204ENST00000371320 CCDC171Q6TFL3 1326 aa34.84■■■■□ 3.17
SSBP3-204ENST00000371320 PARP4Q9UKK3 1724 aaKnown RBP34.83■■■■□ 3.17
SSBP3-204ENST00000371320 NMIQ13287 307 aaPredicted RBP34.83■■■■□ 3.17
SSBP3-204ENST00000371320 ZSCAN23Q3MJ62 389 aa34.83■■■■□ 3.17
SSBP3-204ENST00000371320 COL15A1P39059 1388 aa34.83■■■■□ 3.17
SSBP3-204ENST00000371320 RFX5P48382 616 aaPredicted RBP34.83■■■■□ 3.17
SSBP3-204ENST00000371320 RABL6Q3YEC7 729 aaPredicted RBP34.83■■■■□ 3.17
SSBP3-204ENST00000371320 RUFY3Q7L099 469 aa34.83■■■■□ 3.17
SSBP3-204ENST00000371320 KCNB2Q92953 911 aa34.83■■■■□ 3.17
SSBP3-204ENST00000371320 FAM227BQ96M60 508 aa34.83■■■■□ 3.17
SSBP3-204ENST00000371320 PTPN12Q05209 780 aaKnown RBP34.82■■■■□ 3.16
SSBP3-204ENST00000371320 FSD1Q9BTV5 496 aa34.82■■■■□ 3.16
SSBP3-204ENST00000371320 ERBB4Q15303 1308 aa34.82■■■■□ 3.16
SSBP3-204ENST00000371320 XIRP1Q702N8 1843 aaKnown RBP34.82■■■■□ 3.16
SSBP3-204ENST00000371320 WDR33Q9C0J8 1336 aaKnown RBP34.81■■■■□ 3.16
SSBP3-204ENST00000371320 JAKMIP1Q96N16 626 aaKnown RBP34.81■■■■□ 3.16
SSBP3-204ENST00000371320 GLI3P10071 1580 aa34.8■■■■□ 3.16
SSBP3-204ENST00000371320 ERVV-2B6SEH9 535 aa34.8■■■■□ 3.16
SSBP3-204ENST00000371320 NECTIN1Q15223 517 aa34.8■■■■□ 3.16
SSBP3-204ENST00000371320 TM6SF1Q9BZW5 370 aa34.8■■■■□ 3.16
SSBP3-204ENST00000371320 CPA1P15085 419 aa34.8■■■■□ 3.16
SSBP3-204ENST00000371320 ZKSCAN1P17029 563 aaPredicted RBP34.79■■■■□ 3.16
SSBP3-204ENST00000371320 SOS2Q07890 1332 aaPredicted RBP34.79■■■■□ 3.16
SSBP3-204ENST00000371320 ARFGEF2Q9Y6D5 1785 aa34.79■■■■□ 3.16
SSBP3-204ENST00000371320 LAMB4A4D0S4 1761 aa34.78■■■■□ 3.16
SSBP3-204ENST00000371320 NBPF26B4DH59 902 aa34.78■■■■□ 3.16
SSBP3-204ENST00000371320 KCNJ4P48050 445 aa34.78■■■■□ 3.16
SSBP3-204ENST00000371320 NBPF14Q5TI25 921 aa34.78■■■■□ 3.16
SSBP3-204ENST00000371320 NBPF10Q6P3W6 841 aaKnown RBP34.78■■■■□ 3.16
SSBP3-204ENST00000371320 NBPF15Q8N660 670 aa34.78■■■■□ 3.16
SSBP3-204ENST00000371320 LARP6Q9BRS8 491 aaKnown RBP34.78■■■■□ 3.16
SSBP3-204ENST00000371320 SNRKQ9NRH2 765 aa34.78■■■■□ 3.16
SSBP3-204ENST00000371320 PDRG1Q9NUG6 133 aa34.78■■■■□ 3.16
SSBP3-204ENST00000371320 SLAIN2Q9P270 581 aa34.78■■■■□ 3.16
SSBP3-204ENST00000371320 RBM8AQ9Y5S9 174 aaKnown RBP34.78■■■■□ 3.16
SSBP3-204ENST00000371320 AFDNP55196 1824 aaKnown RBP34.78■■■■□ 3.16
SSBP3-204ENST00000371320 ADCK5Q3MIX3 580 aa34.78■■■■□ 3.16
SSBP3-204ENST00000371320 VPS53Q5VIR6 699 aa34.78■■■■□ 3.16
SSBP3-204ENST00000371320 ZSWIM6Q9HCJ5 1215 aa34.78■■■■□ 3.16
SSBP3-204ENST00000371320 ZSCAN21Q9Y5A6 473 aaPredicted RBP34.78■■■■□ 3.16
SSBP3-204ENST00000371320 CYP46A1Q9Y6A2 500 aa34.78■■■■□ 3.16
SSBP3-204ENST00000371320 CASP7P55210 303 aa34.77■■■■□ 3.16
SSBP3-204ENST00000371320 TFCP2Q12800 502 aa34.77■■■■□ 3.16
SSBP3-204ENST00000371320 MAP4K1Q92918 833 aa34.77■■■■□ 3.16
SSBP3-204ENST00000371320 TNNI3KQ59H18 835 aa34.77■■■■□ 3.16
SSBP3-204ENST00000371320 RRAGDQ9NQL2 400 aaPredicted RBP34.77■■■■□ 3.16
SSBP3-204ENST00000371320 FPGT-TNNI3KV9GXZ4 949 aa34.77■■■■□ 3.16
SSBP3-204ENST00000371320 COL5A2P05997 1499 aaPredicted RBP34.76■■■■□ 3.16
SSBP3-204ENST00000371320 MBD3O95983 291 aa34.76■■■■□ 3.16
SSBP3-204ENST00000371320 RBM27Q9P2N5 1060 aaKnown RBP34.76■■■■□ 3.16
SSBP3-204ENST00000371320 A0A0D9SFI3 127 aa34.75■■■■□ 3.15
SSBP3-204ENST00000371320 NASPP49321 788 aaPredicted RBP34.75■■■■□ 3.15
SSBP3-204ENST00000371320 CREB3L3Q68CJ9 461 aa34.75■■■■□ 3.15
SSBP3-204ENST00000371320 IL2RBP14784 551 aa34.75■■■■□ 3.15
SSBP3-204ENST00000371320 DBNLQ9UJU6 430 aaKnown RBP34.75■■■■□ 3.15
SSBP3-204ENST00000371320 ATP5JP18859 108 aa34.74■■■■□ 3.15
SSBP3-204ENST00000371320 NKX1-1Q15270 411 aaPredicted RBP34.74■■■■□ 3.15
SSBP3-204ENST00000371320 CARD10Q9BWT7 1032 aa34.74■■■■□ 3.15
SSBP3-204ENST00000371320 RPAP1Q9BWH6 1393 aaPredicted RBP34.74■■■■□ 3.15
SSBP3-204ENST00000371320 LMBR1LQ6UX01 489 aa34.72■■■■□ 3.15
SSBP3-204ENST00000371320 SMC3Q9UQE7 1217 aa34.72■■■■□ 3.15
SSBP3-204ENST00000371320 ZNF335Q9H4Z2 1342 aaPredicted RBP34.72■■■■□ 3.15
SSBP3-204ENST00000371320 H7C1W4 665 aa34.72■■■■□ 3.15
SSBP3-204ENST00000371320 TTLL7Q6ZT98 887 aa34.72■■■■□ 3.15
SSBP3-204ENST00000371320 DDX54Q8TDD1 881 aaKnown RBP34.72■■■■□ 3.15
SSBP3-204ENST00000371320 ZSCAN31Q96LW9 406 aaPredicted RBP34.72■■■■□ 3.15
SSBP3-204ENST00000371320 NSFL1CQ9UNZ2 370 aaKnown RBP34.71■■■■□ 3.15
SSBP3-204ENST00000371320 A1BGP04217 495 aa34.7■■■■□ 3.15
SSBP3-204ENST00000371320 TMEM63CQ9P1W3 806 aa34.7■■■■□ 3.15
SSBP3-204ENST00000371320 MED23Q9ULK4 1368 aa34.7■■■■□ 3.15
SSBP3-204ENST00000371320 SLC27A2O14975 620 aa34.7■■■■□ 3.15
SSBP3-204ENST00000371320 FOXD4L6Q3SYB3 417 aaPredicted RBP34.7■■■■□ 3.15
SSBP3-204ENST00000371320 FOXD4L3Q6VB84 417 aaPredicted RBP34.7■■■■□ 3.15
SSBP3-204ENST00000371320 SH2B1Q9NRF2 756 aaPredicted RBP34.7■■■■□ 3.15
SSBP3-204ENST00000371320 CWC25Q9NXE8 425 aaPredicted RBP34.7■■■■□ 3.15
SSBP3-204ENST00000371320 LARGE1O95461 756 aa34.69■■■■□ 3.14
SSBP3-204ENST00000371320 EDC3Q96F86 508 aaKnown RBP34.69■■■■□ 3.14
SSBP3-204ENST00000371320 FOXO4P98177 505 aa34.69■■■■□ 3.14
SSBP3-204ENST00000371320 RNF20Q5VTR2 975 aa34.69■■■■□ 3.14
SSBP3-204ENST00000371320 STRN4Q9NRL3 753 aa34.69■■■■□ 3.14
SSBP3-204ENST00000371320 CHMP3Q9Y3E7 222 aa34.69■■■■□ 3.14
SSBP3-204ENST00000371320 PSMA5P28066 241 aa34.68■■■■□ 3.14
SSBP3-204ENST00000371320 ANP32BQ92688 251 aaKnown RBP34.68■■■■□ 3.14
SSBP3-204ENST00000371320 KCPQ6ZWJ8 1503 aa34.67■■■■□ 3.14
SSBP3-204ENST00000371320 ZSCAN22P10073 491 aaPredicted RBP34.67■■■■□ 3.14
SSBP3-204ENST00000371320 EVA1CP58658 441 aa34.67■■■■□ 3.14
SSBP3-204ENST00000371320 CCDC83Q8IWF9 413 aa34.67■■■■□ 3.14
SSBP3-204ENST00000371320 STX6O43752 255 aa34.66■■■■□ 3.14
SSBP3-204ENST00000371320 SYT1P21579 422 aa34.66■■■■□ 3.14
SSBP3-204ENST00000371320 TRIM44Q96DX7 344 aaPredicted RBP34.66■■■■□ 3.14
SSBP3-204ENST00000371320 DBNDD2Q9BQY9 259 aa34.66■■■■□ 3.14
SSBP3-204ENST00000371320 UBR2Q8IWV8 1755 aa34.66■■■■□ 3.14
SSBP3-204ENST00000371320 PRIM1P49642 420 aaKnown RBP34.66■■■■□ 3.14
SSBP3-204ENST00000371320 CCDC173Q0VFZ6 552 aa34.66■■■■□ 3.14
SSBP3-204ENST00000371320 ZNF589Q86UQ0 364 aaPredicted RBP34.65■■■■□ 3.14
SSBP3-204ENST00000371320 ZBTB3Q9H5J0 574 aa34.64■■■■□ 3.14
SSBP3-204ENST00000371320 GDPD2Q9HCC8 539 aa34.63■■■■□ 3.13
SSBP3-204ENST00000371320 LRSAM1Q6UWE0 723 aa34.62■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms