RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 FLIIQ13045 1269 aa12.71□□□□□ -0.37
COL11A1-203ENST00000370096 ANAPC4Q9UJX5 808 aa12.71□□□□□ -0.37
COL11A1-203ENST00000370096 GOLGA6L9A6NEM1 432 aa12.71□□□□□ -0.38
COL11A1-203ENST00000370096 DPH6Q7L8W6 267 aa12.71□□□□□ -0.38
COL11A1-203ENST00000370096 CTAGE15A4D2H0 777 aa12.71□□□□□ -0.38
COL11A1-203ENST00000370096 CTAGE8P0CG41 777 aa12.71□□□□□ -0.38
COL11A1-203ENST00000370096 AMPD3Q01432 767 aa12.71□□□□□ -0.38
COL11A1-203ENST00000370096 TTLL12Q14166 644 aaPredicted RBP12.71□□□□□ -0.38
COL11A1-203ENST00000370096 CTAGE6Q86UF2 777 aa12.71□□□□□ -0.38
COL11A1-203ENST00000370096 CTAGE4Q8IX94 777 aa12.71□□□□□ -0.38
COL11A1-203ENST00000370096 RPAP2Q8IXW5 612 aaPredicted RBP12.71□□□□□ -0.38
COL11A1-203ENST00000370096 RPUSD2Q8IZ73 545 aaKnown RBP12.71□□□□□ -0.38
COL11A1-203ENST00000370096 SMC6Q96SB8 1091 aa12.71□□□□□ -0.38
COL11A1-203ENST00000370096 SLC26A6Q9BXS9 759 aa12.71□□□□□ -0.38
COL11A1-203ENST00000370096 TCP11L1Q9NUJ3 509 aa12.71□□□□□ -0.38
COL11A1-203ENST00000370096 EXOC1Q9NV70 894 aa12.71□□□□□ -0.38
COL11A1-203ENST00000370096 AKAP2Q9Y2D5 859 aa12.71□□□□□ -0.38
COL11A1-203ENST00000370096 F6X3S4 739 aa12.7□□□□□ -0.38
COL11A1-203ENST00000370096 TBC1D5Q92609 795 aa12.7□□□□□ -0.38
COL11A1-203ENST00000370096 NDC80O14777 642 aa12.7□□□□□ -0.38
COL11A1-203ENST00000370096 RRAGBQ5VZM2 374 aa12.7□□□□□ -0.38
COL11A1-203ENST00000370096 UBE2Q2Q8WVN8 375 aa12.7□□□□□ -0.38
COL11A1-203ENST00000370096 KCNK9Q9NPC2 374 aa12.7□□□□□ -0.38
COL11A1-203ENST00000370096 AKR1B10O60218 316 aa12.7□□□□□ -0.38
COL11A1-203ENST00000370096 FERMT1Q9BQL6 677 aa12.7□□□□□ -0.38
COL11A1-203ENST00000370096 PDIA4P13667 645 aaKnown RBP12.7□□□□□ -0.38
COL11A1-203ENST00000370096 IFT81Q8WYA0 676 aa12.7□□□□□ -0.38
COL11A1-203ENST00000370096 KIF20AO95235 890 aa12.7□□□□□ -0.38
COL11A1-203ENST00000370096 CCDC129Q6ZRS4 1044 aa12.7□□□□□ -0.38
COL11A1-203ENST00000370096 DDX46Q7L014 1031 aaKnown RBP12.7□□□□□ -0.38
COL11A1-203ENST00000370096 PTCD1O75127 700 aaKnown RBP12.7□□□□□ -0.38
COL11A1-203ENST00000370096 DUSP27Q5VZP5 1158 aa12.7□□□□□ -0.38
COL11A1-203ENST00000370096 CWC25Q9NXE8 425 aaPredicted RBP12.7□□□□□ -0.38
COL11A1-203ENST00000370096 USP16Q9Y5T5 823 aa12.7□□□□□ -0.38
COL11A1-203ENST00000370096 CCDC171Q6TFL3 1326 aa12.7□□□□□ -0.38
COL11A1-203ENST00000370096 NOLC1Q14978 699 aaKnown RBP eCLIP12.69□□□□□ -0.38
COL11A1-203ENST00000370096 IFI16Q16666 785 aaKnown RBP12.69□□□□□ -0.38
COL11A1-203ENST00000370096 TMEM67Q5HYA8 995 aa12.69□□□□□ -0.38
COL11A1-203ENST00000370096 MICU3Q86XE3 530 aa12.69□□□□□ -0.38
COL11A1-203ENST00000370096 SELENOOQ9BVL4 669 aa12.69□□□□□ -0.38
COL11A1-203ENST00000370096 MRVI1Q9Y6F6 885 aa12.69□□□□□ -0.38
COL11A1-203ENST00000370096 PLEKHH1Q9ULM0 1364 aa12.69□□□□□ -0.38
COL11A1-203ENST00000370096 TTC36A6NLP5 189 aa12.69□□□□□ -0.38
COL11A1-203ENST00000370096 RHOXF2BP0C7M4 288 aa12.69□□□□□ -0.38
COL11A1-203ENST00000370096 SEPT14Q6ZU15 432 aa12.69□□□□□ -0.38
COL11A1-203ENST00000370096 CCDC25Q86WR0 208 aa12.69□□□□□ -0.38
COL11A1-203ENST00000370096 PRIMPOLQ96LW4 560 aa12.69□□□□□ -0.38
COL11A1-203ENST00000370096 SEC62Q99442 399 aaKnown RBP12.69□□□□□ -0.38
COL11A1-203ENST00000370096 RHOXF2Q9BQY4 288 aa12.69□□□□□ -0.38
COL11A1-203ENST00000370096 CCDC50Q8IVM0 306 aa12.69□□□□□ -0.38
COL11A1-203ENST00000370096 CCDC114Q96M63 670 aa12.69□□□□□ -0.38
COL11A1-203ENST00000370096 SKILP12757 684 aa12.69□□□□□ -0.38
COL11A1-203ENST00000370096 KARSQ15046 597 aaKnown RBP12.69□□□□□ -0.38
COL11A1-203ENST00000370096 PROSER2Q86WR7 435 aaPredicted RBP12.69□□□□□ -0.38
COL11A1-203ENST00000370096 RASAL2Q9UJF2 1139 aa12.69□□□□□ -0.38
COL11A1-203ENST00000370096 GNAT3A8MTJ3 354 aa12.69□□□□□ -0.38
COL11A1-203ENST00000370096 CNPY2Q9Y2B0 182 aa12.69□□□□□ -0.38
COL11A1-203ENST00000370096 OPA1O60313 960 aa12.68□□□□□ -0.38
COL11A1-203ENST00000370096 HMGB1P09429 215 aaKnown RBP12.68□□□□□ -0.38
COL11A1-203ENST00000370096 ARID4AP29374 1257 aaPredicted RBP12.68□□□□□ -0.38
COL11A1-203ENST00000370096 EEF2P13639 858 aaKnown RBP12.68□□□□□ -0.38
COL11A1-203ENST00000370096 MAP3K12Q12852 859 aa12.68□□□□□ -0.38
COL11A1-203ENST00000370096 CPLX4Q7Z7G2 160 aa12.68□□□□□ -0.38
COL11A1-203ENST00000370096 NECAB1Q8N987 351 aa12.68□□□□□ -0.38
COL11A1-203ENST00000370096 WDR66Q8TBY9 1149 aa12.68□□□□□ -0.38
COL11A1-203ENST00000370096 PDS5BQ9NTI5 1447 aa12.67□□□□□ -0.38
COL11A1-203ENST00000370096 ERCC3P19447 782 aa12.67□□□□□ -0.38
COL11A1-203ENST00000370096 CTAGE9A4FU28 777 aa12.67□□□□□ -0.38
COL11A1-203ENST00000370096 UBA7P41226 1012 aa12.67□□□□□ -0.38
COL11A1-203ENST00000370096 CCDC174Q6PII3 467 aa12.67□□□□□ -0.38
COL11A1-203ENST00000370096 EHMT1Q9H9B1 1298 aa12.67□□□□□ -0.38
COL11A1-203ENST00000370096 ANKRD30BQ9BXX2 1392 aa12.67□□□□□ -0.38
COL11A1-203ENST00000370096 TLDC2A0PJX2 215 aa12.67□□□□□ -0.38
COL11A1-203ENST00000370096 UBE2HP62256 183 aa12.67□□□□□ -0.38
COL11A1-203ENST00000370096 CCDC186Q7Z3E2 898 aa12.67□□□□□ -0.38
COL11A1-203ENST00000370096 AOPEPQ8N6M6 819 aa12.67□□□□□ -0.38
COL11A1-203ENST00000370096 CCDC102BQ68D86 513 aa12.67□□□□□ -0.38
COL11A1-203ENST00000370096 PAXIP1Q6ZW49 1069 aaPredicted RBP12.67□□□□□ -0.38
COL11A1-203ENST00000370096 EHBP1Q8NDI1 1231 aa12.67□□□□□ -0.38
COL11A1-203ENST00000370096 WIZO95785 1651 aa12.67□□□□□ -0.38
COL11A1-203ENST00000370096 SH3BP5O60239 455 aa12.67□□□□□ -0.38
COL11A1-203ENST00000370096 METAP2P50579 478 aaKnown RBP eCLIP12.67□□□□□ -0.38
COL11A1-203ENST00000370096 GOLIM4O00461 696 aa12.67□□□□□ -0.38
COL11A1-203ENST00000370096 KIF5BP33176 963 aa12.67□□□□□ -0.38
COL11A1-203ENST00000370096 IARSP41252 1262 aaKnown RBP12.67□□□□□ -0.38
COL11A1-203ENST00000370096 PIP4K2BP78356 416 aa12.67□□□□□ -0.38
COL11A1-203ENST00000370096 USHBP1Q8N6Y0 703 aa12.67□□□□□ -0.38
COL11A1-203ENST00000370096 MIPOL1Q8TD10 442 aa12.67□□□□□ -0.38
COL11A1-203ENST00000370096 RUSC2Q8N2Y8 1516 aa12.66□□□□□ -0.38
COL11A1-203ENST00000370096 TMPOP42166 694 aaKnown RBP12.66□□□□□ -0.38
COL11A1-203ENST00000370096 SYKP43405 635 aa12.66□□□□□ -0.38
COL11A1-203ENST00000370096 LRSAM1Q6UWE0 723 aa12.66□□□□□ -0.38
COL11A1-203ENST00000370096 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.66□□□□□ -0.38
COL11A1-203ENST00000370096 NACADO15069 1562 aa12.66□□□□□ -0.38
COL11A1-203ENST00000370096 SLFN5Q08AF3 891 aa12.66□□□□□ -0.38
COL11A1-203ENST00000370096 AKNAD1Q5T1N1 836 aa12.66□□□□□ -0.38
COL11A1-203ENST00000370096 SCAPERQ9BY12 1400 aa12.66□□□□□ -0.38
COL11A1-203ENST00000370096 KRBA2Q6ZNG9 492 aa12.66□□□□□ -0.38
COL11A1-203ENST00000370096 LRRC2Q9BYS8 371 aa12.66□□□□□ -0.38
COL11A1-203ENST00000370096 GOLGA1Q92805 767 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms