RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 ANO8Q9HCE9 1232 aaPredicted RBP21.51■■□□□ 1.03
UBE3D-203ENST00000369747 NARFQ9UHQ1 456 aa21.51■■□□□ 1.03
UBE3D-203ENST00000369747 ISCA1Q9BUE6 129 aa21.51■■□□□ 1.03
UBE3D-203ENST00000369747 BCORQ6W2J9 1755 aa21.5■■□□□ 1.03
UBE3D-203ENST00000369747 HMGB2P26583 209 aaKnown RBP21.5■■□□□ 1.03
UBE3D-203ENST00000369747 SSFA2P28290 1259 aa21.5■■□□□ 1.03
UBE3D-203ENST00000369747 RFC4P35249 363 aa21.5■■□□□ 1.03
UBE3D-203ENST00000369747 ANKRD45Q5TZF3 282 aa21.5■■□□□ 1.03
UBE3D-203ENST00000369747 USPL1Q5W0Q7 1092 aa21.5■■□□□ 1.03
UBE3D-203ENST00000369747 UPF1Q92900 1129 aaKnown RBP eCLIP21.5■■□□□ 1.03
UBE3D-203ENST00000369747 BCL2L12Q9HB09 334 aa21.5■■□□□ 1.03
UBE3D-203ENST00000369747 ADRA2BP18089 450 aa21.49■■□□□ 1.03
UBE3D-203ENST00000369747 ANKRD44Q8N8A2 993 aa21.49■■□□□ 1.03
UBE3D-203ENST00000369747 JARID2Q92833 1246 aaPredicted RBP21.49■■□□□ 1.03
UBE3D-203ENST00000369747 C9orf78Q9NZ63 289 aaPredicted RBP21.49■■□□□ 1.03
UBE3D-203ENST00000369747 ZPR1O75312 459 aa21.49■■□□□ 1.03
UBE3D-203ENST00000369747 TUBGCP6Q96RT7 1819 aa21.48■■□□□ 1.03
UBE3D-203ENST00000369747 SCN7AQ01118 1682 aa21.48■■□□□ 1.03
UBE3D-203ENST00000369747 ANKRD36CQ5JPF3 1778 aa21.48■■□□□ 1.03
UBE3D-203ENST00000369747 GRM8O00222 908 aa21.48■■□□□ 1.03
UBE3D-203ENST00000369747 HSP90AB3PQ58FF7 597 aa21.48■■□□□ 1.03
UBE3D-203ENST00000369747 ILDR2Q71H61 639 aa21.48■■□□□ 1.03
UBE3D-203ENST00000369747 USP42Q9H9J4 1324 aaKnown RBP21.48■■□□□ 1.03
UBE3D-203ENST00000369747 TRIM28Q13263 835 aaKnown RBP21.47■■□□□ 1.03
UBE3D-203ENST00000369747 CEP85Q6P2H3 762 aa21.47■■□□□ 1.03
UBE3D-203ENST00000369747 RPAP2Q8IXW5 612 aaPredicted RBP21.47■■□□□ 1.03
UBE3D-203ENST00000369747 ZNF34Q8IZ26 560 aa21.47■■□□□ 1.03
UBE3D-203ENST00000369747 CCDC191Q8NCU4 936 aa21.47■■□□□ 1.03
UBE3D-203ENST00000369747 DCTPP1Q9H773 170 aa21.47■■□□□ 1.03
UBE3D-203ENST00000369747 CWC25Q9NXE8 425 aaPredicted RBP21.47■■□□□ 1.03
UBE3D-203ENST00000369747 UBN2Q6ZU65 1347 aa21.47■■□□□ 1.03
UBE3D-203ENST00000369747 GNAI3P08754 354 aa21.47■■□□□ 1.03
UBE3D-203ENST00000369747 UBTFL1P0CB47 393 aaPredicted RBP21.47■■□□□ 1.03
UBE3D-203ENST00000369747 RTL5Q5HYW3 569 aaPredicted RBP21.47■■□□□ 1.03
UBE3D-203ENST00000369747 CLEC4GQ6UXB4 293 aa21.47■■□□□ 1.03
UBE3D-203ENST00000369747 NLRP10Q86W26 655 aa21.47■■□□□ 1.03
UBE3D-203ENST00000369747 ZNF652Q9Y2D9 606 aa21.46■■□□□ 1.03
UBE3D-203ENST00000369747 SLC15A2Q16348 729 aa21.45■■□□□ 1.02
UBE3D-203ENST00000369747 UBE3BQ7Z3V4 1068 aa21.45■■□□□ 1.02
UBE3D-203ENST00000369747 LRRFIP2Q9Y608 721 aaKnown RBP21.45■■□□□ 1.02
UBE3D-203ENST00000369747 UTYO14607 1347 aa21.45■■□□□ 1.02
UBE3D-203ENST00000369747 COL23A1Q86Y22 540 aaPredicted RBP21.45■■□□□ 1.02
UBE3D-203ENST00000369747 NIP7Q9Y221 180 aaKnown RBP eCLIP21.45■■□□□ 1.02
UBE3D-203ENST00000369747 IBTKQ9P2D0 1353 aaPredicted RBP21.44■■□□□ 1.02
UBE3D-203ENST00000369747 GNAI2P04899 355 aa21.44■■□□□ 1.02
UBE3D-203ENST00000369747 TBC1D9BQ66K14 1250 aa21.44■■□□□ 1.02
UBE3D-203ENST00000369747 PNPLA7Q6ZV29 1317 aa21.43■■□□□ 1.02
UBE3D-203ENST00000369747 BICDL1Q6ZP65 573 aa21.43■■□□□ 1.02
UBE3D-203ENST00000369747 TBC1D32Q96NH3 1257 aa21.43■■□□□ 1.02
UBE3D-203ENST00000369747 FAM177BA6PVY3 158 aa21.43■■□□□ 1.02
UBE3D-203ENST00000369747 CASP7P55210 303 aa21.43■■□□□ 1.02
UBE3D-203ENST00000369747 SYNE4Q8N205 404 aa21.43■■□□□ 1.02
UBE3D-203ENST00000369747 FAM89AQ96GI7 184 aa21.43■■□□□ 1.02
UBE3D-203ENST00000369747 KAZALD1Q96I82 304 aa21.43■■□□□ 1.02
UBE3D-203ENST00000369747 H7C1W4 665 aa21.42■■□□□ 1.02
UBE3D-203ENST00000369747 GYS1P13807 737 aa21.42■■□□□ 1.02
UBE3D-203ENST00000369747 SLC4A3P48751 1232 aa21.42■■□□□ 1.02
UBE3D-203ENST00000369747 SUSD4Q5VX71 490 aa21.42■■□□□ 1.02
UBE3D-203ENST00000369747 UPF2Q9HAU5 1272 aaKnown RBP21.42■■□□□ 1.02
UBE3D-203ENST00000369747 STK32BQ9NY57 414 aa21.42■■□□□ 1.02
UBE3D-203ENST00000369747 RGL2O15211 777 aa21.41■■□□□ 1.02
UBE3D-203ENST00000369747 BMP2KLQ5H9B9 411 aa21.41■■□□□ 1.02
UBE3D-203ENST00000369747 SUCLG2Q96I99 432 aa21.41■■□□□ 1.02
UBE3D-203ENST00000369747 TRMT112Q9UI30 125 aaKnown RBP21.4■■□□□ 1.02
UBE3D-203ENST00000369747 EPHA10Q5JZY3 1008 aa21.39■■□□□ 1.02
UBE3D-203ENST00000369747 ZBTB38Q8NAP3 1195 aaPredicted RBP21.39■■□□□ 1.02
UBE3D-203ENST00000369747 FLAD1Q8NFF5 587 aa21.39■■□□□ 1.02
UBE3D-203ENST00000369747 PCCAP05165 728 aaPredicted RBP21.39■■□□□ 1.01
UBE3D-203ENST00000369747 PARP10Q53GL7 1025 aa21.39■■□□□ 1.01
UBE3D-203ENST00000369747 SETDB2Q96T68 719 aa21.38■■□□□ 1.01
UBE3D-203ENST00000369747 PDGFDQ9GZP0 370 aaPredicted RBP21.38■■□□□ 1.01
UBE3D-203ENST00000369747 BICC1Q9H694 974 aaKnown RBP21.38■■□□□ 1.01
UBE3D-203ENST00000369747 NFIXQ14938 502 aa21.37■■□□□ 1.01
UBE3D-203ENST00000369747 DAXXQ9UER7 740 aaPredicted RBP21.37■■□□□ 1.01
UBE3D-203ENST00000369747 PNMA6EA0A0J9YXQ4 647 aa21.37■■□□□ 1.01
UBE3D-203ENST00000369747 NTSR2O95665 410 aa21.37■■□□□ 1.01
UBE3D-203ENST00000369747 NUTM1Q86Y26 1132 aa21.37■■□□□ 1.01
UBE3D-203ENST00000369747 UTP14AQ9BVJ6 771 aaKnown RBP21.37■■□□□ 1.01
UBE3D-203ENST00000369747 MFAP1P55081 439 aaKnown RBP21.35■■□□□ 1.01
UBE3D-203ENST00000369747 PPP1R42Q7Z4L9 355 aa21.35■■□□□ 1.01
UBE3D-203ENST00000369747 PLEKHM2Q8IWE5 1019 aa21.35■■□□□ 1.01
UBE3D-203ENST00000369747 HMMRO75330 724 aa21.35■■□□□ 1.01
UBE3D-203ENST00000369747 QSER1Q2KHR3 1735 aa21.34■■□□□ 1.01
UBE3D-203ENST00000369747 FOXO4P98177 505 aa21.34■■□□□ 1.01
UBE3D-203ENST00000369747 ATP8B2P98198 1209 aa21.34■■□□□ 1.01
UBE3D-203ENST00000369747 NBR1Q14596 966 aa21.34■■□□□ 1.01
UBE3D-203ENST00000369747 HDAC5Q9UQL6 1122 aa21.34■■□□□ 1.01
UBE3D-203ENST00000369747 COL24A1Q17RW2 1714 aa21.34■■□□□ 1.01
UBE3D-203ENST00000369747 SH3TC1Q8TE82 1336 aa21.34■■□□□ 1.01
UBE3D-203ENST00000369747 IRS4O14654 1257 aaPredicted RBP21.33■■□□□ 1.01
UBE3D-203ENST00000369747 TM4SF1P30408 202 aa21.33■■□□□ 1.01
UBE3D-203ENST00000369747 SRGAP3O43295 1099 aa21.33■■□□□ 1
UBE3D-203ENST00000369747 MSL1Q68DK7 614 aa21.33■■□□□ 1
UBE3D-203ENST00000369747 NBPF5PQ86XG9 351 aaPredicted RBP21.33■■□□□ 1
UBE3D-203ENST00000369747 C22orf23Q9BZE7 217 aa21.33■■□□□ 1
UBE3D-203ENST00000369747 CDHR2Q9BYE9 1310 aa21.33■■□□□ 1
UBE3D-203ENST00000369747 CARMIL3Q8ND23 1372 aa21.32■■□□□ 1
UBE3D-203ENST00000369747 HCLS1P14317 486 aaPredicted RBP21.32■■□□□ 1
UBE3D-203ENST00000369747 ERFEQ4G0M1 354 aa21.32■■□□□ 1
UBE3D-203ENST00000369747 C16orf71Q8IYS4 520 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms