RNA–Protein interactions for RNA: ENST00000369553.5

HIPK1-203, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 2,883 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-203ENST00000369553 PXDNQ92626 1479 aa12.4□□□□□ -0.42
HIPK1-203ENST00000369553 CAND2O75155 1236 aa12.4□□□□□ -0.43
HIPK1-203ENST00000369553 IGHDP01880 384 aa12.4□□□□□ -0.43
HIPK1-203ENST00000369553 IFT57Q9NWB7 429 aa12.4□□□□□ -0.43
HIPK1-203ENST00000369553 RGPD5Q99666 1765 aa12.4□□□□□ -0.43
HIPK1-203ENST00000369553 FAM184AQ8NB25 1140 aa12.39□□□□□ -0.43
HIPK1-203ENST00000369553 BRINP3Q76B58 766 aa12.39□□□□□ -0.43
HIPK1-203ENST00000369553 MCM10Q7L590 875 aa12.39□□□□□ -0.43
HIPK1-203ENST00000369553 TMTC2Q8N394 836 aa12.39□□□□□ -0.43
HIPK1-203ENST00000369553 MBIPQ9NS73 344 aa12.39□□□□□ -0.43
HIPK1-203ENST00000369553 SCP2P22307 547 aa12.38□□□□□ -0.43
HIPK1-203ENST00000369553 GNAI1P63096 354 aa12.38□□□□□ -0.43
HIPK1-203ENST00000369553 PANK1Q8TE04 598 aa12.38□□□□□ -0.43
HIPK1-203ENST00000369553 NPHP3Q7Z494 1330 aa12.38□□□□□ -0.43
HIPK1-203ENST00000369553 RBM6P78332 1123 aaKnown RBP12.38□□□□□ -0.43
HIPK1-203ENST00000369553 KMT5BQ4FZB7 885 aa12.38□□□□□ -0.43
HIPK1-203ENST00000369553 SRLQ86TD4 932 aa12.38□□□□□ -0.43
HIPK1-203ENST00000369553 SSH1Q8WYL5 1049 aa12.38□□□□□ -0.43
HIPK1-203ENST00000369553 C22orf23Q9BZE7 217 aa12.38□□□□□ -0.43
HIPK1-203ENST00000369553 RRP15Q9Y3B9 282 aaKnown RBP12.38□□□□□ -0.43
HIPK1-203ENST00000369553 CALRP27797 417 aaKnown RBP12.37□□□□□ -0.43
HIPK1-203ENST00000369553 SWT1Q5T5J6 900 aaKnown RBP12.37□□□□□ -0.43
HIPK1-203ENST00000369553 C1QTNF12Q5T7M4 302 aa12.37□□□□□ -0.43
HIPK1-203ENST00000369553 LRRC59Q96AG4 307 aaKnown RBP12.37□□□□□ -0.43
HIPK1-203ENST00000369553 FAM53CQ9NYF3 392 aa12.37□□□□□ -0.43
HIPK1-203ENST00000369553 MTA1Q13330 715 aa12.37□□□□□ -0.43
HIPK1-203ENST00000369553 TSPYL6Q8N831 410 aa12.37□□□□□ -0.43
HIPK1-203ENST00000369553 GTF3C6Q969F1 213 aa12.37□□□□□ -0.43
HIPK1-203ENST00000369553 IRAK4Q9NWZ3 460 aa12.37□□□□□ -0.43
HIPK1-203ENST00000369553 AXIN2Q9Y2T1 843 aa12.37□□□□□ -0.43
HIPK1-203ENST00000369553 TNS3Q68CZ2 1445 aa12.37□□□□□ -0.43
HIPK1-203ENST00000369553 CRYBG1Q9Y4K1 1723 aa12.37□□□□□ -0.43
HIPK1-203ENST00000369553 RLBP1P12271 317 aa12.36□□□□□ -0.43
HIPK1-203ENST00000369553 PDE3AQ14432 1141 aa12.36□□□□□ -0.43
HIPK1-203ENST00000369553 NAIF1Q69YI7 327 aaPredicted RBP12.36□□□□□ -0.43
HIPK1-203ENST00000369553 CABLES1Q8TDN4 633 aa12.36□□□□□ -0.43
HIPK1-203ENST00000369553 CRB1P82279 1406 aa12.36□□□□□ -0.43
HIPK1-203ENST00000369553 SYCE3A1L190 88 aa12.36□□□□□ -0.43
HIPK1-203ENST00000369553 BAG4O95429 457 aaKnown RBP12.36□□□□□ -0.43
HIPK1-203ENST00000369553 ZC3H6P61129 1189 aaKnown RBP12.36□□□□□ -0.43
HIPK1-203ENST00000369553 MCTP2Q6DN12 878 aa12.36□□□□□ -0.43
HIPK1-203ENST00000369553 SLAIN2Q9P270 581 aa12.36□□□□□ -0.43
HIPK1-203ENST00000369553 CIZ1Q9ULV3 898 aaPredicted RBP12.36□□□□□ -0.43
HIPK1-203ENST00000369553 LRRFIP2Q9Y608 721 aaKnown RBP12.36□□□□□ -0.43
HIPK1-203ENST00000369553 SPATA31A3Q5VYP0 1347 aa12.36□□□□□ -0.43
HIPK1-203ENST00000369553 ZSCAN26Q16670 478 aa12.36□□□□□ -0.43
HIPK1-203ENST00000369553 SLC24A3Q9HC58 644 aa12.36□□□□□ -0.43
HIPK1-203ENST00000369553 KIF3CO14782 793 aa12.35□□□□□ -0.43
HIPK1-203ENST00000369553 VAMP4O75379 141 aa12.35□□□□□ -0.43
HIPK1-203ENST00000369553 MCTP1Q6DN14 999 aa12.35□□□□□ -0.43
HIPK1-203ENST00000369553 GPT2Q8TD30 523 aa12.35□□□□□ -0.43
HIPK1-203ENST00000369553 COG6Q9Y2V7 657 aa12.35□□□□□ -0.43
HIPK1-203ENST00000369553 COL18A1P39060 1754 aa12.35□□□□□ -0.43
HIPK1-203ENST00000369553 POLD1P28340 1107 aa12.35□□□□□ -0.43
HIPK1-203ENST00000369553 TXLNBQ8N3L3 684 aa12.35□□□□□ -0.43
HIPK1-203ENST00000369553 C8orf58Q8NAV2 365 aa12.35□□□□□ -0.43
HIPK1-203ENST00000369553 NBPF3Q9H094 633 aa12.35□□□□□ -0.43
HIPK1-203ENST00000369553 ELL2O00472 640 aaPredicted RBP12.34□□□□□ -0.43
HIPK1-203ENST00000369553 SYCP1Q15431 976 aa12.34□□□□□ -0.43
HIPK1-203ENST00000369553 ANKRD23Q86SG2 305 aa12.34□□□□□ -0.43
HIPK1-203ENST00000369553 SMC5Q8IY18 1101 aa12.34□□□□□ -0.43
HIPK1-203ENST00000369553 GAS2L2Q8NHY3 880 aa12.34□□□□□ -0.43
HIPK1-203ENST00000369553 ANKRD24Q8TF21 1146 aa12.34□□□□□ -0.43
HIPK1-203ENST00000369553 KIF1BPQ96EK5 621 aa12.34□□□□□ -0.43
HIPK1-203ENST00000369553 CHL1O00533 1208 aa12.34□□□□□ -0.43
HIPK1-203ENST00000369553 LIG1P18858 919 aa12.33□□□□□ -0.44
HIPK1-203ENST00000369553 LRSAM1Q6UWE0 723 aa12.33□□□□□ -0.44
HIPK1-203ENST00000369553 ZNF397Q8NF99 534 aaPredicted RBP12.33□□□□□ -0.44
HIPK1-203ENST00000369553 CLUAP1Q96AJ1 413 aa12.33□□□□□ -0.44
HIPK1-203ENST00000369553 CAMTA1Q9Y6Y1 1673 aa12.33□□□□□ -0.44
HIPK1-203ENST00000369553 IPO7O95373 1038 aaKnown RBP12.33□□□□□ -0.44
HIPK1-203ENST00000369553 TPM3P06753 285 aa12.33□□□□□ -0.44
HIPK1-203ENST00000369553 NUCKS1Q9H1E3 243 aaKnown RBP12.33□□□□□ -0.44
HIPK1-203ENST00000369553 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.33□□□□□ -0.44
HIPK1-203ENST00000369553 NOB1Q9ULX3 412 aaKnown RBP12.33□□□□□ -0.44
HIPK1-203ENST00000369553 V9GYY5 206 aaPredicted RBP12.33□□□□□ -0.44
HIPK1-203ENST00000369553 LRRC37A3O60309 1634 aa12.33□□□□□ -0.44
HIPK1-203ENST00000369553 NCAPD2Q15021 1401 aa12.32□□□□□ -0.44
HIPK1-203ENST00000369553 PAX7P23759 505 aa12.32□□□□□ -0.44
HIPK1-203ENST00000369553 KRT24Q2M2I5 525 aa12.32□□□□□ -0.44
HIPK1-203ENST00000369553 ZKSCAN2Q63HK3 967 aa12.32□□□□□ -0.44
HIPK1-203ENST00000369553 TTLL5Q6EMB2 1281 aa12.32□□□□□ -0.44
HIPK1-203ENST00000369553 MIS18AQ9NYP9 233 aa12.32□□□□□ -0.44
HIPK1-203ENST00000369553 PLEKHG2Q9H7P9 1386 aa12.32□□□□□ -0.44
HIPK1-203ENST00000369553 POLR3GO15318 223 aaPredicted RBP12.32□□□□□ -0.44
HIPK1-203ENST00000369553 ST5P78524 1137 aa12.32□□□□□ -0.44
HIPK1-203ENST00000369553 ALDH1L2Q3SY69 923 aa12.32□□□□□ -0.44
HIPK1-203ENST00000369553 PYCARDQ9ULZ3 195 aa12.32□□□□□ -0.44
HIPK1-203ENST00000369553 SOS2Q07890 1332 aaPredicted RBP12.32□□□□□ -0.44
HIPK1-203ENST00000369553 TWISTNBQ3B726 338 aaPredicted RBP12.32□□□□□ -0.44
HIPK1-203ENST00000369553 RTF1Q92541 710 aaKnown RBP12.32□□□□□ -0.44
HIPK1-203ENST00000369553 GNAT3A8MTJ3 354 aa12.31□□□□□ -0.44
HIPK1-203ENST00000369553 CTAGE5O15320 804 aa12.31□□□□□ -0.44
HIPK1-203ENST00000369553 TRDNQ13061 729 aa12.31□□□□□ -0.44
HIPK1-203ENST00000369553 FBXO38Q6PIJ6 1188 aa12.31□□□□□ -0.44
HIPK1-203ENST00000369553 RINLQ6ZS11 566 aa12.31□□□□□ -0.44
HIPK1-203ENST00000369553 FAM210AQ96ND0 272 aa12.31□□□□□ -0.44
HIPK1-203ENST00000369553 PAIP2Q9BPZ3 127 aaKnown RBP12.31□□□□□ -0.44
HIPK1-203ENST00000369553 MAP3K5Q99683 1374 aa12.31□□□□□ -0.44
HIPK1-203ENST00000369553 LMO7Q8WWI1 1683 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms