RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 PCCAP05165 728 aaPredicted RBP29.67■■■□□ 2.34
SNX3-203ENST00000368979 RGL2O15211 777 aa29.66■■■□□ 2.34
SNX3-203ENST00000368979 GNPATO15228 680 aa29.66■■■□□ 2.34
SNX3-203ENST00000368979 GPTP24298 496 aa29.66■■■□□ 2.34
SNX3-203ENST00000368979 UBN2Q6ZU65 1347 aa29.65■■■□□ 2.34
SNX3-203ENST00000368979 ZBTB38Q8NAP3 1195 aaPredicted RBP29.65■■■□□ 2.34
SNX3-203ENST00000368979 FOXO4P98177 505 aa29.64■■■□□ 2.34
SNX3-203ENST00000368979 NOP58Q9Y2X3 529 aaKnown RBP29.64■■■□□ 2.34
SNX3-203ENST00000368979 RTCBQ9Y3I0 505 aaKnown RBP29.64■■■□□ 2.34
SNX3-203ENST00000368979 C4AP0C0L4 1744 aa29.64■■■□□ 2.34
SNX3-203ENST00000368979 CDHR2Q9BYE9 1310 aa29.63■■■□□ 2.33
SNX3-203ENST00000368979 PLSCR1O15162 318 aa29.63■■■□□ 2.33
SNX3-203ENST00000368979 RGPD3A6NKT7 1758 aaPredicted RBP29.63■■■□□ 2.33
SNX3-203ENST00000368979 RGPD4Q7Z3J3 1758 aa29.63■■■□□ 2.33
SNX3-203ENST00000368979 SURF6O75683 361 aaKnown RBP29.62■■■□□ 2.33
SNX3-203ENST00000368979 CLEC4GQ6UXB4 293 aa29.62■■■□□ 2.33
SNX3-203ENST00000368979 TSHZ2Q9NRE2 1034 aa29.62■■■□□ 2.33
SNX3-203ENST00000368979 ZNF652Q9Y2D9 606 aa29.62■■■□□ 2.33
SNX3-203ENST00000368979 UBR3Q6ZT12 1888 aa29.61■■■□□ 2.33
SNX3-203ENST00000368979 RAB11FIP3O75154 756 aa29.61■■■□□ 2.33
SNX3-203ENST00000368979 RTL5Q5HYW3 569 aaPredicted RBP29.61■■■□□ 2.33
SNX3-203ENST00000368979 ZBTB47Q9UFB7 747 aaPredicted RBP29.61■■■□□ 2.33
SNX3-203ENST00000368979 EP400Q96L91 3159 aa29.61■■■□□ 2.33
SNX3-203ENST00000368979 APBB1O00213 710 aa29.61■■■□□ 2.33
SNX3-203ENST00000368979 TXNRD1Q16881 649 aa29.61■■■□□ 2.33
SNX3-203ENST00000368979 AMIGO3Q86WK7 504 aa29.61■■■□□ 2.33
SNX3-203ENST00000368979 AK7Q96M32 723 aa29.61■■■□□ 2.33
SNX3-203ENST00000368979 PLA2G12BQ9BX93 195 aa29.61■■■□□ 2.33
SNX3-203ENST00000368979 LRRCC1Q9C099 1032 aa29.61■■■□□ 2.33
SNX3-203ENST00000368979 NARFQ9UHQ1 456 aa29.61■■■□□ 2.33
SNX3-203ENST00000368979 SMARCA5O60264 1052 aaPredicted RBP29.6■■■□□ 2.33
SNX3-203ENST00000368979 HSP90AB4PQ58FF6 505 aa29.6■■■□□ 2.33
SNX3-203ENST00000368979 SMIM5Q71RC9 77 aa29.6■■■□□ 2.33
SNX3-203ENST00000368979 PROM2Q8N271 834 aa29.6■■■□□ 2.33
SNX3-203ENST00000368979 PARP10Q53GL7 1025 aa29.59■■■□□ 2.33
SNX3-203ENST00000368979 FAM89AQ96GI7 184 aa29.59■■■□□ 2.33
SNX3-203ENST00000368979 APBA3O96018 575 aa29.58■■■□□ 2.33
SNX3-203ENST00000368979 HMGB2P26583 209 aaKnown RBP29.58■■■□□ 2.33
SNX3-203ENST00000368979 RFX5P48382 616 aaPredicted RBP29.58■■■□□ 2.33
SNX3-203ENST00000368979 LMBR1LQ6UX01 489 aa29.58■■■□□ 2.33
SNX3-203ENST00000368979 BCL2L12Q9HB09 334 aa29.57■■■□□ 2.32
SNX3-203ENST00000368979 PA2G4Q9UQ80 394 aaKnown RBP29.57■■■□□ 2.32
SNX3-203ENST00000368979 SUSD4Q5VX71 490 aa29.56■■■□□ 2.32
SNX3-203ENST00000368979 ARHGEF1Q92888 912 aaKnown RBP29.56■■■□□ 2.32
SNX3-203ENST00000368979 TRMT112Q9UI30 125 aaKnown RBP29.56■■■□□ 2.32
SNX3-203ENST00000368979 ADRA2BP18089 450 aa29.55■■■□□ 2.32
SNX3-203ENST00000368979 NIP7Q9Y221 180 aaKnown RBP eCLIP29.55■■■□□ 2.32
SNX3-203ENST00000368979 LAMB2P55268 1798 aa29.55■■■□□ 2.32
SNX3-203ENST00000368979 USPL1Q5W0Q7 1092 aa29.55■■■□□ 2.32
SNX3-203ENST00000368979 C16orf71Q8IYS4 520 aaPredicted RBP29.55■■■□□ 2.32
SNX3-203ENST00000368979 RHPN1Q8TCX5 695 aa29.55■■■□□ 2.32
SNX3-203ENST00000368979 KIF1BPQ96EK5 621 aa29.55■■■□□ 2.32
SNX3-203ENST00000368979 COPRSQ9NQ92 184 aa29.55■■■□□ 2.32
SNX3-203ENST00000368979 COL24A1Q17RW2 1714 aa29.54■■■□□ 2.32
SNX3-203ENST00000368979 PLEKHM2Q8IWE5 1019 aa29.54■■■□□ 2.32
SNX3-203ENST00000368979 SYNE4Q8N205 404 aa29.54■■■□□ 2.32
SNX3-203ENST00000368979 SRP68Q9UHB9 627 aaKnown RBP29.54■■■□□ 2.32
SNX3-203ENST00000368979 USP42Q9H9J4 1324 aaKnown RBP29.53■■■□□ 2.32
SNX3-203ENST00000368979 TRAPPC3LQ5T215 181 aa29.53■■■□□ 2.32
SNX3-203ENST00000368979 UTP14AQ9BVJ6 771 aaKnown RBP29.53■■■□□ 2.32
SNX3-203ENST00000368979 MYH3P11055 1940 aa29.53■■■□□ 2.32
SNX3-203ENST00000368979 ZPR1O75312 459 aa29.52■■■□□ 2.32
SNX3-203ENST00000368979 NTSR2O95665 410 aa29.52■■■□□ 2.32
SNX3-203ENST00000368979 PTPN12Q05209 780 aaKnown RBP29.52■■■□□ 2.32
SNX3-203ENST00000368979 FAM161AQ3B820 660 aa29.52■■■□□ 2.32
SNX3-203ENST00000368979 ERC1Q8IUD2 1116 aa29.52■■■□□ 2.32
SNX3-203ENST00000368979 DDX60Q8IY21 1712 aaKnown RBP29.51■■■□□ 2.32
SNX3-203ENST00000368979 IRS4O14654 1257 aaPredicted RBP29.51■■■□□ 2.32
SNX3-203ENST00000368979 CSF1RP07333 972 aa29.51■■■□□ 2.32
SNX3-203ENST00000368979 OTUD7AQ8TE49 926 aaPredicted RBP29.51■■■□□ 2.32
SNX3-203ENST00000368979 SH3TC1Q8TE82 1336 aa29.51■■■□□ 2.31
SNX3-203ENST00000368979 SALL3Q9BXA9 1300 aa29.51■■■□□ 2.31
SNX3-203ENST00000368979 PHF14O94880 888 aa29.5■■■□□ 2.31
SNX3-203ENST00000368979 C8orf34Q49A92 452 aa29.5■■■□□ 2.31
SNX3-203ENST00000368979 KLHDC4Q8TBB5 520 aa29.5■■■□□ 2.31
SNX3-203ENST00000368979 BACH2Q9BYV9 841 aa29.5■■■□□ 2.31
SNX3-203ENST00000368979 SSFA2P28290 1259 aa29.5■■■□□ 2.31
SNX3-203ENST00000368979 OS9Q13438 667 aaPredicted RBP29.5■■■□□ 2.31
SNX3-203ENST00000368979 CHMP3Q9Y3E7 222 aa29.5■■■□□ 2.31
SNX3-203ENST00000368979 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.49■■■□□ 2.31
SNX3-203ENST00000368979 RFC4P35249 363 aa29.49■■■□□ 2.31
SNX3-203ENST00000368979 G3BP1Q13283 466 aaKnown RBP eCLIP29.49■■■□□ 2.31
SNX3-203ENST00000368979 TBC1D9BQ66K14 1250 aa29.49■■■□□ 2.31
SNX3-203ENST00000368979 PDE8AO60658 829 aa29.48■■■□□ 2.31
SNX3-203ENST00000368979 CTSWP56202 376 aa29.48■■■□□ 2.31
SNX3-203ENST00000368979 IL1RAPL2Q9NP60 686 aa29.48■■■□□ 2.31
SNX3-203ENST00000368979 SASH1O94885 1247 aa29.46■■■□□ 2.31
SNX3-203ENST00000368979 BMP2KLQ5H9B9 411 aa29.46■■■□□ 2.31
SNX3-203ENST00000368979 SIL1Q9H173 461 aa29.46■■■□□ 2.31
SNX3-203ENST00000368979 OSBPL3Q9H4L5 887 aa29.46■■■□□ 2.31
SNX3-203ENST00000368979 FAM177BA6PVY3 158 aa29.45■■■□□ 2.31
SNX3-203ENST00000368979 TTLL11Q8NHH1 800 aa29.45■■■□□ 2.31
SNX3-203ENST00000368979 BCL11AQ9H165 835 aa29.45■■■□□ 2.31
SNX3-203ENST00000368979 AKT1S1Q96B36 256 aa29.45■■■□□ 2.3
SNX3-203ENST00000368979 TUBGCP6Q96RT7 1819 aa29.44■■■□□ 2.3
SNX3-203ENST00000368979 PDE1AP54750 535 aa29.43■■■□□ 2.3
SNX3-203ENST00000368979 ZNF827Q17R98 1081 aa29.43■■■□□ 2.3
SNX3-203ENST00000368979 TTC22Q5TAA0 569 aa29.43■■■□□ 2.3
SNX3-203ENST00000368979 HSP90B1P14625 803 aaKnown RBP29.42■■■□□ 2.3
SNX3-203ENST00000368979 MX1P20591 662 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms