RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 ZNF530Q6P9A1 599 aaPredicted RBP14.45□□□□□ -0.1
TUBE1-201ENST00000368657 CSRNP1Q96S65 589 aa14.45□□□□□ -0.1
TUBE1-201ENST00000368657 GPRC5DQ9NZD1 345 aa14.45□□□□□ -0.1
TUBE1-201ENST00000368657 CANXP27824 592 aaKnown RBP14.44□□□□□ -0.1
TUBE1-201ENST00000368657 C1orf141Q5JVX7 400 aa14.44□□□□□ -0.1
TUBE1-201ENST00000368657 SZT2Q5T011 3432 aa14.43□□□□□ -0.1
TUBE1-201ENST00000368657 KLRG2A4D1S0 409 aaPredicted RBP14.43□□□□□ -0.1
TUBE1-201ENST00000368657 ZNF157P51786 506 aaPredicted RBP14.43□□□□□ -0.1
TUBE1-201ENST00000368657 GRIPAP1Q4V328 841 aa14.43□□□□□ -0.1
TUBE1-201ENST00000368657 CC2D2BQ6DHV5 1058 aa14.43□□□□□ -0.1
TUBE1-201ENST00000368657 VSIG10Q8N0Z9 540 aa14.43□□□□□ -0.1
TUBE1-201ENST00000368657 MKI67P46013 3256 aaKnown RBP14.43□□□□□ -0.1
TUBE1-201ENST00000368657 CUL9Q8IWT3 2517 aa14.42□□□□□ -0.1
TUBE1-201ENST00000368657 OLFM4Q6UX06 510 aa14.42□□□□□ -0.1
TUBE1-201ENST00000368657 C2orf69Q8N8R5 385 aa14.42□□□□□ -0.1
TUBE1-201ENST00000368657 CARD11Q9BXL7 1154 aa14.42□□□□□ -0.1
TUBE1-201ENST00000368657 ZNF296Q8WUU4 475 aaPredicted RBP14.41□□□□□ -0.1
TUBE1-201ENST00000368657 STARD3NLO95772 234 aa14.4□□□□□ -0.1
TUBE1-201ENST00000368657 NOM1Q5C9Z4 860 aaKnown RBP14.4□□□□□ -0.1
TUBE1-201ENST00000368657 LARGE2Q8N3Y3 721 aa14.4□□□□□ -0.1
TUBE1-201ENST00000368657 BCORQ6W2J9 1755 aa14.39□□□□□ -0.11
TUBE1-201ENST00000368657 GBA2Q9HCG7 927 aaPredicted RBP14.39□□□□□ -0.11
TUBE1-201ENST00000368657 TBC1D2BQ9UPU7 963 aa14.39□□□□□ -0.11
TUBE1-201ENST00000368657 SSUH2Q9Y2M2 353 aa14.39□□□□□ -0.11
TUBE1-201ENST00000368657 PITPNM1O00562 1244 aa14.38□□□□□ -0.11
TUBE1-201ENST00000368657 SLC10A3P09131 477 aa14.38□□□□□ -0.11
TUBE1-201ENST00000368657 USP48Q86UV5 1035 aa14.38□□□□□ -0.11
TUBE1-201ENST00000368657 OTUD5Q96G74 571 aa14.38□□□□□ -0.11
TUBE1-201ENST00000368657 POTEFA5A3E0 1075 aa14.37□□□□□ -0.11
TUBE1-201ENST00000368657 EIF4A2Q14240 407 aaKnown RBP14.37□□□□□ -0.11
TUBE1-201ENST00000368657 NPM2Q86SE8 214 aaKnown RBP14.37□□□□□ -0.11
TUBE1-201ENST00000368657 NBPF5PQ86XG9 351 aaPredicted RBP14.37□□□□□ -0.11
TUBE1-201ENST00000368657 NIM1KQ8IY84 436 aa14.37□□□□□ -0.11
TUBE1-201ENST00000368657 SLC52A2Q9HAB3 445 aa14.37□□□□□ -0.11
TUBE1-201ENST00000368657 ANKRD26Q9UPS8 1709 aa14.36□□□□□ -0.11
TUBE1-201ENST00000368657 HIRAP54198 1017 aaPredicted RBP14.36□□□□□ -0.11
TUBE1-201ENST00000368657 TPTE2Q6XPS3 522 aa14.36□□□□□ -0.11
TUBE1-201ENST00000368657 VPS33BQ9H267 617 aa14.36□□□□□ -0.11
TUBE1-201ENST00000368657 CDHR2Q9BYE9 1310 aa14.36□□□□□ -0.11
TUBE1-201ENST00000368657 SCN11AQ9UI33 1791 aa14.35□□□□□ -0.11
TUBE1-201ENST00000368657 IL6STP40189 918 aaPredicted RBP14.35□□□□□ -0.11
TUBE1-201ENST00000368657 COL6A3P12111 3177 aa14.35□□□□□ -0.11
TUBE1-201ENST00000368657 GPR25O00155 361 aa14.34□□□□□ -0.11
TUBE1-201ENST00000368657 TBC1D8O95759 1140 aa14.34□□□□□ -0.11
TUBE1-201ENST00000368657 SLC39A6Q13433 755 aa14.34□□□□□ -0.11
TUBE1-201ENST00000368657 TEX13AQ9BXU3 409 aaPredicted RBP14.34□□□□□ -0.11
TUBE1-201ENST00000368657 POLKQ9UBT6 870 aa14.34□□□□□ -0.11
TUBE1-201ENST00000368657 GMPSP49915 693 aaPredicted RBP14.33□□□□□ -0.12
TUBE1-201ENST00000368657 CXCL9Q07325 125 aa14.33□□□□□ -0.12
TUBE1-201ENST00000368657 CLEC4GQ6UXB4 293 aa14.33□□□□□ -0.12
TUBE1-201ENST00000368657 TRIOBPQ9H2D6 2365 aa14.33□□□□□ -0.12
TUBE1-201ENST00000368657 COL4A5P29400 1685 aa14.33□□□□□ -0.12
TUBE1-201ENST00000368657 SNED1Q8TER0 1413 aa14.32□□□□□ -0.12
TUBE1-201ENST00000368657 H7C1D1 291 aa14.32□□□□□ -0.12
TUBE1-201ENST00000368657 FKTNO75072 461 aa14.32□□□□□ -0.12
TUBE1-201ENST00000368657 CAMTA2O94983 1202 aa14.32□□□□□ -0.12
TUBE1-201ENST00000368657 TESK2Q96S53 571 aa14.32□□□□□ -0.12
TUBE1-201ENST00000368657 BCL2L13Q9BXK5 485 aa14.32□□□□□ -0.12
TUBE1-201ENST00000368657 ZNRF3Q9ULT6 936 aa14.32□□□□□ -0.12
TUBE1-201ENST00000368657 ZNF330Q9Y3S2 320 aaPredicted RBP14.32□□□□□ -0.12
TUBE1-201ENST00000368657 NPC1L1Q9UHC9 1359 aa14.32□□□□□ -0.12
TUBE1-201ENST00000368657 TNIP1Q15025 636 aa14.31□□□□□ -0.12
TUBE1-201ENST00000368657 KIF20BQ96Q89 1820 aa14.31□□□□□ -0.12
TUBE1-201ENST00000368657 H0YGN5 161 aa14.3□□□□□ -0.12
TUBE1-201ENST00000368657 EN2P19622 333 aaPredicted RBP14.3□□□□□ -0.12
TUBE1-201ENST00000368657 KRT26Q7Z3Y9 468 aa14.3□□□□□ -0.12
TUBE1-201ENST00000368657 CNOT7Q9UIV1 285 aaKnown RBP14.3□□□□□ -0.12
TUBE1-201ENST00000368657 SCN7AQ01118 1682 aa14.3□□□□□ -0.12
TUBE1-201ENST00000368657 PPIP5K2O43314 1243 aa14.29□□□□□ -0.12
TUBE1-201ENST00000368657 TRPM4Q8TD43 1214 aa14.29□□□□□ -0.12
TUBE1-201ENST00000368657 LGR6Q9HBX8 967 aa14.29□□□□□ -0.12
TUBE1-201ENST00000368657 TM4SF4P48230 202 aa14.28□□□□□ -0.12
TUBE1-201ENST00000368657 DLK2Q6UY11 383 aa14.28□□□□□ -0.12
TUBE1-201ENST00000368657 DCPSQ96C86 337 aaKnown RBP14.28□□□□□ -0.12
TUBE1-201ENST00000368657 CFHR5Q9BXR6 569 aa14.28□□□□□ -0.12
TUBE1-201ENST00000368657 RBM27Q9P2N5 1060 aaKnown RBP14.28□□□□□ -0.12
TUBE1-201ENST00000368657 ZNF652Q9Y2D9 606 aa14.28□□□□□ -0.12
TUBE1-201ENST00000368657 DZIP3Q86Y13 1208 aaKnown RBP14.27□□□□□ -0.13
TUBE1-201ENST00000368657 RASAL3Q86YV0 1011 aa14.27□□□□□ -0.13
TUBE1-201ENST00000368657 TMEM106CQ9BVX2 250 aa14.27□□□□□ -0.13
TUBE1-201ENST00000368657 RBBP6Q7Z6E9 1792 aaKnown RBP14.27□□□□□ -0.13
TUBE1-201ENST00000368657 RNMTO43148 476 aaKnown RBP14.26□□□□□ -0.13
TUBE1-201ENST00000368657 GTF2E1P29083 439 aaPredicted RBP14.26□□□□□ -0.13
TUBE1-201ENST00000368657 FKBP1BP68106 108 aa14.26□□□□□ -0.13
TUBE1-201ENST00000368657 CRY2Q49AN0 593 aa14.26□□□□□ -0.13
TUBE1-201ENST00000368657 TTC5Q8N0Z6 440 aa14.26□□□□□ -0.13
TUBE1-201ENST00000368657 COL25A1Q9BXS0 654 aaPredicted RBP14.26□□□□□ -0.13
TUBE1-201ENST00000368657 TMX4Q9H1E5 349 aaPredicted RBP14.26□□□□□ -0.13
TUBE1-201ENST00000368657 PAPPA2Q9BXP8 1791 aa14.25□□□□□ -0.13
TUBE1-201ENST00000368657 RGL2O15211 777 aa14.25□□□□□ -0.13
TUBE1-201ENST00000368657 AOC3Q16853 763 aa14.25□□□□□ -0.13
TUBE1-201ENST00000368657 SUPT20HQ8NEM7 779 aa14.25□□□□□ -0.13
TUBE1-201ENST00000368657 TRIM17Q9Y577 477 aa14.25□□□□□ -0.13
TUBE1-201ENST00000368657 HOXA10P31260 410 aaPredicted RBP14.24□□□□□ -0.13
TUBE1-201ENST00000368657 DPF2Q92785 391 aa14.24□□□□□ -0.13
TUBE1-201ENST00000368657 ARMC5Q96C12 935 aa14.24□□□□□ -0.13
TUBE1-201ENST00000368657 CARD14Q9BXL6 1004 aa14.24□□□□□ -0.13
TUBE1-201ENST00000368657 KIAA0100Q14667 2235 aaKnown RBP14.24□□□□□ -0.13
TUBE1-201ENST00000368657 ANKRD13DQ6ZTN6 518 aa14.23□□□□□ -0.13
TUBE1-201ENST00000368657 MICALL2Q8IY33 904 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms