RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 CWC25Q9NXE8 425 aaPredicted RBP13.32□□□□□ -0.28
RD3-201ENST00000367002 ZMYM4Q5VZL5 1548 aa13.32□□□□□ -0.28
RD3-201ENST00000367002 KIF4BQ2VIQ3 1234 aa13.32□□□□□ -0.28
RD3-201ENST00000367002 ANO6Q4KMQ2 910 aa13.32□□□□□ -0.28
RD3-201ENST00000367002 CPLX3Q8WVH0 158 aa13.32□□□□□ -0.28
RD3-201ENST00000367002 CCDC102AQ96A19 550 aa13.32□□□□□ -0.28
RD3-201ENST00000367002 SOS1Q07889 1333 aaPredicted RBP13.32□□□□□ -0.28
RD3-201ENST00000367002 RANBP6O60518 1105 aaKnown RBP13.31□□□□□ -0.28
RD3-201ENST00000367002 CCDC144CPQ8IYA2 1237 aa13.31□□□□□ -0.28
RD3-201ENST00000367002 INSRP06213 1382 aa13.31□□□□□ -0.28
RD3-201ENST00000367002 LMBR1LQ6UX01 489 aa13.31□□□□□ -0.28
RD3-201ENST00000367002 BMP2KQ9NSY1 1161 aaPredicted RBP13.31□□□□□ -0.28
RD3-201ENST00000367002 NPATQ14207 1427 aa13.31□□□□□ -0.28
RD3-201ENST00000367002 DNMT1P26358 1616 aaKnown RBP13.31□□□□□ -0.28
RD3-201ENST00000367002 EIF2AK4Q9P2K8 1649 aaKnown RBP13.31□□□□□ -0.28
RD3-201ENST00000367002 ODF2Q5BJF6 829 aa13.31□□□□□ -0.28
RD3-201ENST00000367002 IQCA1Q86XH1 822 aa13.31□□□□□ -0.28
RD3-201ENST00000367002 TSPYL1Q9H0U9 437 aa13.31□□□□□ -0.28
RD3-201ENST00000367002 RRAGDQ9NQL2 400 aaPredicted RBP13.31□□□□□ -0.28
RD3-201ENST00000367002 BLMP54132 1417 aaPredicted RBP13.31□□□□□ -0.28
RD3-201ENST00000367002 ANKRD18BA2A2Z9 1011 aa13.3□□□□□ -0.28
RD3-201ENST00000367002 SYT1P21579 422 aa13.3□□□□□ -0.28
RD3-201ENST00000367002 CWF19L2Q2TBE0 894 aaKnown RBP13.3□□□□□ -0.28
RD3-201ENST00000367002 PPP4R3BQ5MIZ7 849 aa13.3□□□□□ -0.28
RD3-201ENST00000367002 CTCFLQ8NI51 663 aaPredicted RBP13.3□□□□□ -0.28
RD3-201ENST00000367002 HS1BP3Q53T59 392 aa13.3□□□□□ -0.28
RD3-201ENST00000367002 KIAA1328Q86T90 577 aa13.3□□□□□ -0.28
RD3-201ENST00000367002 PHAXQ9H814 394 aaKnown RBP13.3□□□□□ -0.28
RD3-201ENST00000367002 ADGRL2O95490 1459 aa13.3□□□□□ -0.28
RD3-201ENST00000367002 ASXL2Q76L83 1435 aa13.3□□□□□ -0.28
RD3-201ENST00000367002 MAP3K19Q56UN5 1328 aa13.3□□□□□ -0.28
RD3-201ENST00000367002 NPHP3Q7Z494 1330 aa13.3□□□□□ -0.28
RD3-201ENST00000367002 KLF18A0A0U1RQI7 1052 aa13.3□□□□□ -0.28
RD3-201ENST00000367002 CPA1P15085 419 aa13.3□□□□□ -0.28
RD3-201ENST00000367002 NMIQ13287 307 aaPredicted RBP13.3□□□□□ -0.28
RD3-201ENST00000367002 CHRNA2Q15822 529 aa13.3□□□□□ -0.28
RD3-201ENST00000367002 NCOA7Q8NI08 942 aa13.3□□□□□ -0.28
RD3-201ENST00000367002 DNAJC25Q9H1X3 360 aa13.3□□□□□ -0.28
RD3-201ENST00000367002 KIF5CO60282 957 aa13.29□□□□□ -0.28
RD3-201ENST00000367002 SSRP1Q08945 709 aaKnown RBP13.29□□□□□ -0.28
RD3-201ENST00000367002 TMEM67Q5HYA8 995 aa13.29□□□□□ -0.28
RD3-201ENST00000367002 CCDC102BQ68D86 513 aa13.29□□□□□ -0.28
RD3-201ENST00000367002 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
RD3-201ENST00000367002 FAM193AP78312 1265 aa13.29□□□□□ -0.28
RD3-201ENST00000367002 FLT4P35916 1363 aa13.29□□□□□ -0.28
RD3-201ENST00000367002 TTC41PQ6P2S7 1318 aa13.29□□□□□ -0.28
RD3-201ENST00000367002 NUTM2BA6NNL0 878 aaPredicted RBP13.29□□□□□ -0.28
RD3-201ENST00000367002 NUTM2EB1AL46 878 aaPredicted RBP13.29□□□□□ -0.28
RD3-201ENST00000367002 SKILP12757 684 aa13.29□□□□□ -0.28
RD3-201ENST00000367002 IL13P35225 146 aa13.29□□□□□ -0.28
RD3-201ENST00000367002 MCMDC2Q4G0Z9 681 aa13.29□□□□□ -0.28
RD3-201ENST00000367002 Q6ZUG5 572 aa13.29□□□□□ -0.28
RD3-201ENST00000367002 NUTM2AQ8IVF1 878 aaPredicted RBP13.29□□□□□ -0.28
RD3-201ENST00000367002 CGNQ9P2M7 1197 aaKnown RBP13.29□□□□□ -0.28
RD3-201ENST00000367002 METAP2P50579 478 aaKnown RBP eCLIP13.28□□□□□ -0.28
RD3-201ENST00000367002 SNW1Q13573 536 aaKnown RBP13.28□□□□□ -0.28
RD3-201ENST00000367002 HSP90AB3PQ58FF7 597 aa13.28□□□□□ -0.28
RD3-201ENST00000367002 CAVIN4Q5BKX8 364 aa13.28□□□□□ -0.28
RD3-201ENST00000367002 RBSNQ9H1K0 784 aa13.28□□□□□ -0.28
RD3-201ENST00000367002 RNF41Q9H4P4 317 aaPredicted RBP13.28□□□□□ -0.28
RD3-201ENST00000367002 CHL1O00533 1208 aa13.28□□□□□ -0.28
RD3-201ENST00000367002 MEX3CQ5U5Q3 659 aaKnown RBP13.28□□□□□ -0.28
RD3-201ENST00000367002 DISP1Q96F81 1524 aa13.28□□□□□ -0.28
RD3-201ENST00000367002 TYRO3Q06418 890 aa13.28□□□□□ -0.28
RD3-201ENST00000367002 AKAP4Q5JQC9 854 aa13.28□□□□□ -0.28
RD3-201ENST00000367002 LRRC59Q96AG4 307 aaKnown RBP13.28□□□□□ -0.28
RD3-201ENST00000367002 MYO6Q9UM54 1294 aa13.28□□□□□ -0.28
RD3-201ENST00000367002 CEP135Q66GS9 1140 aa13.27□□□□□ -0.28
RD3-201ENST00000367002 CREB3L3Q68CJ9 461 aa13.27□□□□□ -0.28
RD3-201ENST00000367002 ZNF518AQ6AHZ1 1483 aa13.27□□□□□ -0.28
RD3-201ENST00000367002 SLC5A1P13866 664 aa13.27□□□□□ -0.28
RD3-201ENST00000367002 MKNK2Q9HBH9 465 aa13.27□□□□□ -0.28
RD3-201ENST00000367002 TNRQ92752 1358 aa13.27□□□□□ -0.28
RD3-201ENST00000367002 UHRF1BP1LA0JNW5 1464 aa13.27□□□□□ -0.29
RD3-201ENST00000367002 MSH6P52701 1360 aa13.27□□□□□ -0.29
RD3-201ENST00000367002 SYKP43405 635 aa13.27□□□□□ -0.29
RD3-201ENST00000367002 USP5P45974 858 aa13.27□□□□□ -0.29
RD3-201ENST00000367002 CENPHQ9H3R5 247 aa13.27□□□□□ -0.29
RD3-201ENST00000367002 ZFYVE9O95405 1425 aa13.27□□□□□ -0.29
RD3-201ENST00000367002 CASQ1P31415 396 aa13.27□□□□□ -0.29
RD3-201ENST00000367002 TXLNBQ8N3L3 684 aa13.27□□□□□ -0.29
RD3-201ENST00000367002 TMX1Q9H3N1 280 aa13.27□□□□□ -0.29
RD3-201ENST00000367002 PAXBP1Q9Y5B6 917 aa13.27□□□□□ -0.29
RD3-201ENST00000367002 PTPRTO14522 1441 aa13.27□□□□□ -0.29
RD3-201ENST00000367002 RIMS2Q9UQ26 1411 aa13.27□□□□□ -0.29
RD3-201ENST00000367002 GOLGA6L10A6NI86 522 aa13.26□□□□□ -0.29
RD3-201ENST00000367002 MRPS27Q92552 414 aaKnown RBP13.26□□□□□ -0.29
RD3-201ENST00000367002 SLC26A6Q9BXS9 759 aa13.26□□□□□ -0.29
RD3-201ENST00000367002 POLR3GO15318 223 aaPredicted RBP13.26□□□□□ -0.29
RD3-201ENST00000367002 SYCP1Q15431 976 aa13.26□□□□□ -0.29
RD3-201ENST00000367002 CRACR2AQ9BSW2 395 aa13.26□□□□□ -0.29
RD3-201ENST00000367002 GBP3Q9H0R5 595 aa13.26□□□□□ -0.29
RD3-201ENST00000367002 JAKMIP3Q5VZ66 844 aa13.26□□□□□ -0.29
RD3-201ENST00000367002 CCDC148Q8NFR7 591 aa13.26□□□□□ -0.29
RD3-201ENST00000367002 KCNG4Q8TDN1 519 aa13.26□□□□□ -0.29
RD3-201ENST00000367002 TTF1Q15361 905 aaPredicted RBP13.25□□□□□ -0.29
RD3-201ENST00000367002 ADAMTS12P58397 1594 aa13.25□□□□□ -0.29
RD3-201ENST00000367002 GNG11P61952 73 aa13.25□□□□□ -0.29
RD3-201ENST00000367002 IQCEQ6IPM2 695 aa13.25□□□□□ -0.29
RD3-201ENST00000367002 ZFYP08048 801 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms