RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 GIGYF2Q6Y7W6 1299 aaKnown RBP18.38■□□□□ 0.53
NEK2-201ENST00000366998 CCDC87Q9NVE4 849 aa18.38■□□□□ 0.53
NEK2-201ENST00000366998 TRIM6-TRIM34B2RNG4 842 aa18.37■□□□□ 0.53
NEK2-201ENST00000366998 EIF5BO60841 1220 aaKnown RBP18.37■□□□□ 0.53
NEK2-201ENST00000366998 CRKLP46109 303 aaKnown RBP18.37■□□□□ 0.53
NEK2-201ENST00000366998 DZIP3Q86Y13 1208 aaKnown RBP18.37■□□□□ 0.53
NEK2-201ENST00000366998 GJD4Q96KN9 370 aaPredicted RBP18.37■□□□□ 0.53
NEK2-201ENST00000366998 FOXO4P98177 505 aa18.37■□□□□ 0.53
NEK2-201ENST00000366998 ITPK1Q13572 414 aa18.37■□□□□ 0.53
NEK2-201ENST00000366998 HLFQ16534 295 aa18.37■□□□□ 0.53
NEK2-201ENST00000366998 HSP90AB3PQ58FF7 597 aa18.37■□□□□ 0.53
NEK2-201ENST00000366998 RILPL2Q969X0 211 aa18.37■□□□□ 0.53
NEK2-201ENST00000366998 SASH1O94885 1247 aa18.36■□□□□ 0.53
NEK2-201ENST00000366998 IFIT2P09913 472 aaKnown RBP18.36■□□□□ 0.53
NEK2-201ENST00000366998 TRIM28Q13263 835 aaKnown RBP18.36■□□□□ 0.53
NEK2-201ENST00000366998 COPRSQ9NQ92 184 aa18.36■□□□□ 0.53
NEK2-201ENST00000366998 TBC1D2BQ9UPU7 963 aa18.36■□□□□ 0.53
NEK2-201ENST00000366998 RREB1Q92766 1687 aa18.36■□□□□ 0.53
NEK2-201ENST00000366998 MYH14Q7Z406 1995 aaKnown RBP18.36■□□□□ 0.53
NEK2-201ENST00000366998 COL5A3P25940 1745 aaPredicted RBP18.36■□□□□ 0.53
NEK2-201ENST00000366998 GPTP24298 496 aa18.35■□□□□ 0.53
NEK2-201ENST00000366998 RFX5P48382 616 aaPredicted RBP18.35■□□□□ 0.53
NEK2-201ENST00000366998 SLC4A3P48751 1232 aa18.35■□□□□ 0.53
NEK2-201ENST00000366998 INTS5Q6P9B9 1019 aaKnown RBP18.35■□□□□ 0.53
NEK2-201ENST00000366998 AACSQ86V21 672 aa18.35■□□□□ 0.53
NEK2-201ENST00000366998 GPATCH3Q96I76 525 aa18.35■□□□□ 0.53
NEK2-201ENST00000366998 BTAF1O14981 1849 aa18.35■□□□□ 0.53
NEK2-201ENST00000366998 PTPN12Q05209 780 aaKnown RBP18.35■□□□□ 0.53
NEK2-201ENST00000366998 TRPC5Q9UL62 973 aaPredicted RBP18.35■□□□□ 0.53
NEK2-201ENST00000366998 NHSQ6T4R5 1651 aa18.34■□□□□ 0.53
NEK2-201ENST00000366998 ATRNO75882 1429 aa18.34■□□□□ 0.53
NEK2-201ENST00000366998 PI4K2BQ8TCG2 481 aa18.34■□□□□ 0.53
NEK2-201ENST00000366998 TTC41PQ6P2S7 1318 aa18.33■□□□□ 0.53
NEK2-201ENST00000366998 ZNF831Q5JPB2 1677 aa18.33■□□□□ 0.53
NEK2-201ENST00000366998 ERVV-1B6SEH8 477 aa18.33■□□□□ 0.53
NEK2-201ENST00000366998 PCCAP05165 728 aaPredicted RBP18.33■□□□□ 0.53
NEK2-201ENST00000366998 EIF5P55010 431 aaKnown RBP18.33■□□□□ 0.53
NEK2-201ENST00000366998 BECN1Q14457 450 aa18.33■□□□□ 0.53
NEK2-201ENST00000366998 FAM182BQ5T319 152 aa18.33■□□□□ 0.53
NEK2-201ENST00000366998 USP42Q9H9J4 1324 aaKnown RBP18.33■□□□□ 0.52
NEK2-201ENST00000366998 RBM25P49756 843 aaKnown RBP18.33■□□□□ 0.52
NEK2-201ENST00000366998 FAM89AQ96GI7 184 aa18.33■□□□□ 0.52
NEK2-201ENST00000366998 ERC2O15083 957 aa18.32■□□□□ 0.52
NEK2-201ENST00000366998 MAP4K4O95819 1239 aaPredicted RBP18.32■□□□□ 0.52
NEK2-201ENST00000366998 NLRP10Q86W26 655 aa18.32■□□□□ 0.52
NEK2-201ENST00000366998 ZBTB38Q8NAP3 1195 aaPredicted RBP18.32■□□□□ 0.52
NEK2-201ENST00000366998 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.32■□□□□ 0.52
NEK2-201ENST00000366998 PTF1AQ7RTS3 328 aa18.31■□□□□ 0.52
NEK2-201ENST00000366998 EAF2Q96CJ1 260 aaPredicted RBP18.31■□□□□ 0.52
NEK2-201ENST00000366998 CCDC8Q9H0W5 538 aaPredicted RBP18.31■□□□□ 0.52
NEK2-201ENST00000366998 ECHDC1Q9NTX5 307 aa18.31■□□□□ 0.52
NEK2-201ENST00000366998 GLRX3O76003 335 aaKnown RBP18.31■□□□□ 0.52
NEK2-201ENST00000366998 MYH3P11055 1940 aa18.3■□□□□ 0.52
NEK2-201ENST00000366998 SBF2Q86WG5 1849 aa18.3■□□□□ 0.52
NEK2-201ENST00000366998 TFCP2Q12800 502 aa18.29■□□□□ 0.52
NEK2-201ENST00000366998 SEPT12Q8IYM1 358 aa18.29■□□□□ 0.52
NEK2-201ENST00000366998 CNTROBQ8N137 903 aa18.29■□□□□ 0.52
NEK2-201ENST00000366998 REC8O95072 547 aa18.29■□□□□ 0.52
NEK2-201ENST00000366998 KCNQ4P56696 695 aa18.29■□□□□ 0.52
NEK2-201ENST00000366998 LINC00116Q8NCU8 138 aa18.29■□□□□ 0.52
NEK2-201ENST00000366998 QTRT2Q9H974 415 aaKnown RBP18.29■□□□□ 0.52
NEK2-201ENST00000366998 TRMT112Q9UI30 125 aaKnown RBP18.29■□□□□ 0.52
NEK2-201ENST00000366998 CDHR2Q9BYE9 1310 aa18.28■□□□□ 0.52
NEK2-201ENST00000366998 CHMLP26374 656 aa18.28■□□□□ 0.52
NEK2-201ENST00000366998 PLA2G12BQ9BX93 195 aa18.28■□□□□ 0.52
NEK2-201ENST00000366998 TLR7Q9NYK1 1049 aaKnown RBP18.28■□□□□ 0.52
NEK2-201ENST00000366998 CCDC57Q2TAC2 916 aa18.27■□□□□ 0.52
NEK2-201ENST00000366998 ZNF34Q8IZ26 560 aa18.27■□□□□ 0.52
NEK2-201ENST00000366998 SYNE4Q8N205 404 aa18.27■□□□□ 0.52
NEK2-201ENST00000366998 ZNF594Q96JF6 807 aaPredicted RBP18.27■□□□□ 0.52
NEK2-201ENST00000366998 CCDC85AQ96PX6 553 aaPredicted RBP18.27■□□□□ 0.52
NEK2-201ENST00000366998 UBN2Q6ZU65 1347 aa18.27■□□□□ 0.52
NEK2-201ENST00000366998 BCORQ6W2J9 1755 aa18.27■□□□□ 0.51
NEK2-201ENST00000366998 CAMTA2O94983 1202 aa18.26■□□□□ 0.51
NEK2-201ENST00000366998 TNNI3KQ59H18 835 aa18.26■□□□□ 0.51
NEK2-201ENST00000366998 ESYT1Q9BSJ8 1104 aa18.26■□□□□ 0.51
NEK2-201ENST00000366998 USP26Q9BXU7 913 aa18.26■□□□□ 0.51
NEK2-201ENST00000366998 FPGT-TNNI3KV9GXZ4 949 aa18.26■□□□□ 0.51
NEK2-201ENST00000366998 ONECUT3O60422 494 aaPredicted RBP18.26■□□□□ 0.51
NEK2-201ENST00000366998 IRS4O14654 1257 aaPredicted RBP18.25■□□□□ 0.51
NEK2-201ENST00000366998 TAF7LQ5H9L4 462 aa18.25■□□□□ 0.51
NEK2-201ENST00000366998 ATG9AQ7Z3C6 839 aa18.25■□□□□ 0.51
NEK2-201ENST00000366998 TBC1D2Q9BYX2 928 aa18.25■□□□□ 0.51
NEK2-201ENST00000366998 EYA2O00167 538 aa18.24■□□□□ 0.51
NEK2-201ENST00000366998 IL15P40933 162 aaPredicted RBP18.24■□□□□ 0.51
NEK2-201ENST00000366998 CNTNAP4Q9C0A0 1308 aa18.24■□□□□ 0.51
NEK2-201ENST00000366998 FAM177BA6PVY3 158 aa18.24■□□□□ 0.51
NEK2-201ENST00000366998 CSF1RP07333 972 aa18.24■□□□□ 0.51
NEK2-201ENST00000366998 IFIT5Q13325 482 aaKnown RBP18.24■□□□□ 0.51
NEK2-201ENST00000366998 LRRC24Q50LG9 513 aa18.24■□□□□ 0.51
NEK2-201ENST00000366998 LY75O60449 1722 aa18.23■□□□□ 0.51
NEK2-201ENST00000366998 CTSWP56202 376 aa18.23■□□□□ 0.51
NEK2-201ENST00000366998 CCNL1Q9UK58 526 aaPredicted RBP18.23■□□□□ 0.51
NEK2-201ENST00000366998 ZNF652Q9Y2D9 606 aa18.23■□□□□ 0.51
NEK2-201ENST00000366998 CIAO1O76071 339 aa18.22■□□□□ 0.51
NEK2-201ENST00000366998 KIF2CQ99661 725 aa18.22■□□□□ 0.51
NEK2-201ENST00000366998 PUS3Q9BZE2 481 aaKnown RBP18.22■□□□□ 0.51
NEK2-201ENST00000366998 BOLA2Q9H3K6 86 aa18.22■□□□□ 0.51
NEK2-201ENST00000366998 DBNLQ9UJU6 430 aaKnown RBP18.22■□□□□ 0.51
NEK2-201ENST00000366998 BRWD3Q6RI45 1802 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms