RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 RFC4P35249 363 aa22.49■■□□□ 1.19
CCDC7-203ENST00000362006 CASP7P55210 303 aa22.49■■□□□ 1.19
CCDC7-203ENST00000362006 CCDC125Q86Z20 511 aa22.49■■□□□ 1.19
CCDC7-203ENST00000362006 SUCLG2Q96I99 432 aa22.49■■□□□ 1.19
CCDC7-203ENST00000362006 ZBTB38Q8NAP3 1195 aaPredicted RBP22.48■■□□□ 1.19
CCDC7-203ENST00000362006 DCTPP1Q9H773 170 aa22.48■■□□□ 1.19
CCDC7-203ENST00000362006 GPTP24298 496 aa22.48■■□□□ 1.19
CCDC7-203ENST00000362006 BAG6P46379 1132 aa22.48■■□□□ 1.19
CCDC7-203ENST00000362006 SSH3Q8TE77 659 aa22.47■■□□□ 1.19
CCDC7-203ENST00000362006 PPP1R42Q7Z4L9 355 aa22.46■■□□□ 1.19
CCDC7-203ENST00000362006 CAMKK2Q96RR4 588 aa22.46■■□□□ 1.19
CCDC7-203ENST00000362006 CDHR2Q9BYE9 1310 aa22.46■■□□□ 1.19
CCDC7-203ENST00000362006 KAZALD1Q96I82 304 aa22.46■■□□□ 1.19
CCDC7-203ENST00000362006 USP42Q9H9J4 1324 aaKnown RBP22.45■■□□□ 1.18
CCDC7-203ENST00000362006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.45■■□□□ 1.18
CCDC7-203ENST00000362006 POLA2Q14181 598 aa22.45■■□□□ 1.18
CCDC7-203ENST00000362006 USPL1Q5W0Q7 1092 aa22.45■■□□□ 1.18
CCDC7-203ENST00000362006 FLAD1Q8NFF5 587 aa22.45■■□□□ 1.18
CCDC7-203ENST00000362006 AKT1S1Q96B36 256 aa22.45■■□□□ 1.18
CCDC7-203ENST00000362006 BICC1Q9H694 974 aaKnown RBP22.45■■□□□ 1.18
CCDC7-203ENST00000362006 NIP7Q9Y221 180 aaKnown RBP eCLIP22.45■■□□□ 1.18
CCDC7-203ENST00000362006 C4AP0C0L4 1744 aa22.45■■□□□ 1.18
CCDC7-203ENST00000362006 PNMA6EA0A0J9YXQ4 647 aa22.45■■□□□ 1.18
CCDC7-203ENST00000362006 SRGAP3O43295 1099 aa22.45■■□□□ 1.18
CCDC7-203ENST00000362006 TRMT112Q9UI30 125 aaKnown RBP22.45■■□□□ 1.18
CCDC7-203ENST00000362006 PHF14O94880 888 aa22.44■■□□□ 1.18
CCDC7-203ENST00000362006 HSP90B1P14625 803 aaKnown RBP22.44■■□□□ 1.18
CCDC7-203ENST00000362006 RABL6Q3YEC7 729 aaPredicted RBP22.44■■□□□ 1.18
CCDC7-203ENST00000362006 PLA2G12BQ9BX93 195 aa22.44■■□□□ 1.18
CCDC7-203ENST00000362006 UBN2Q6ZU65 1347 aa22.44■■□□□ 1.18
CCDC7-203ENST00000362006 UTP14AQ9BVJ6 771 aaKnown RBP22.43■■□□□ 1.18
CCDC7-203ENST00000362006 EN1Q05925 392 aaPredicted RBP22.43■■□□□ 1.18
CCDC7-203ENST00000362006 AMIGO3Q86WK7 504 aa22.43■■□□□ 1.18
CCDC7-203ENST00000362006 BCL2L12Q9HB09 334 aa22.43■■□□□ 1.18
CCDC7-203ENST00000362006 TFCP2L1Q9NZI6 479 aa22.43■■□□□ 1.18
CCDC7-203ENST00000362006 JARID2Q92833 1246 aaPredicted RBP22.42■■□□□ 1.18
CCDC7-203ENST00000362006 SRP68Q9UHB9 627 aaKnown RBP22.42■■□□□ 1.18
CCDC7-203ENST00000362006 EZH2Q15910 746 aaKnown RBP22.42■■□□□ 1.18
CCDC7-203ENST00000362006 FAM89AQ96GI7 184 aa22.42■■□□□ 1.18
CCDC7-203ENST00000362006 SUSD4Q5VX71 490 aa22.41■■□□□ 1.18
CCDC7-203ENST00000362006 SMIM5Q71RC9 77 aa22.41■■□□□ 1.18
CCDC7-203ENST00000362006 PDZRN3Q9UPQ7 1066 aa22.41■■□□□ 1.18
CCDC7-203ENST00000362006 FOXO4P98177 505 aa22.4■■□□□ 1.18
CCDC7-203ENST00000362006 NUCB1Q02818 461 aa22.4■■□□□ 1.18
CCDC7-203ENST00000362006 HSP90AB4PQ58FF6 505 aa22.4■■□□□ 1.18
CCDC7-203ENST00000362006 SETDB2Q96T68 719 aa22.4■■□□□ 1.18
CCDC7-203ENST00000362006 ZBTB47Q9UFB7 747 aaPredicted RBP22.4■■□□□ 1.18
CCDC7-203ENST00000362006 SH3TC1Q8TE82 1336 aa22.4■■□□□ 1.18
CCDC7-203ENST00000362006 EPHA10Q5JZY3 1008 aa22.4■■□□□ 1.18
CCDC7-203ENST00000362006 ZNF827Q17R98 1081 aa22.39■■□□□ 1.18
CCDC7-203ENST00000362006 RTL5Q5HYW3 569 aaPredicted RBP22.39■■□□□ 1.18
CCDC7-203ENST00000362006 NYXQ9GZU5 481 aa22.39■■□□□ 1.18
CCDC7-203ENST00000362006 TBC1D9BQ66K14 1250 aa22.39■■□□□ 1.17
CCDC7-203ENST00000362006 IRS4O14654 1257 aaPredicted RBP22.38■■□□□ 1.17
CCDC7-203ENST00000362006 RAB11FIP3O75154 756 aa22.38■■□□□ 1.17
CCDC7-203ENST00000362006 ANKRD45Q5TZF3 282 aa22.38■■□□□ 1.17
CCDC7-203ENST00000362006 LMBR1LQ6UX01 489 aa22.38■■□□□ 1.17
CCDC7-203ENST00000362006 NOP58Q9Y2X3 529 aaKnown RBP22.38■■□□□ 1.17
CCDC7-203ENST00000362006 NTSR2O95665 410 aa22.37■■□□□ 1.17
CCDC7-203ENST00000362006 CHD1LQ86WJ1 897 aa22.37■■□□□ 1.17
CCDC7-203ENST00000362006 PDE8AO60658 829 aa22.37■■□□□ 1.17
CCDC7-203ENST00000362006 STK32BQ9NY57 414 aa22.37■■□□□ 1.17
CCDC7-203ENST00000362006 SURF6O75683 361 aaKnown RBP22.36■■□□□ 1.17
CCDC7-203ENST00000362006 COL24A1Q17RW2 1714 aa22.36■■□□□ 1.17
CCDC7-203ENST00000362006 MYH3P11055 1940 aa22.36■■□□□ 1.17
CCDC7-203ENST00000362006 CSF1RP07333 972 aa22.36■■□□□ 1.17
CCDC7-203ENST00000362006 GYS1P13807 737 aa22.35■■□□□ 1.17
CCDC7-203ENST00000362006 SLC15A2Q16348 729 aa22.34■■□□□ 1.17
CCDC7-203ENST00000362006 TPTE2Q6XPS3 522 aa22.34■■□□□ 1.17
CCDC7-203ENST00000362006 BICDL1Q6ZP65 573 aa22.34■■□□□ 1.17
CCDC7-203ENST00000362006 COPRSQ9NQ92 184 aa22.34■■□□□ 1.17
CCDC7-203ENST00000362006 EXOC6BQ9Y2D4 811 aa22.34■■□□□ 1.17
CCDC7-203ENST00000362006 TUBGCP6Q96RT7 1819 aa22.34■■□□□ 1.17
CCDC7-203ENST00000362006 ERC1Q8IUD2 1116 aa22.34■■□□□ 1.17
CCDC7-203ENST00000362006 CARMIL3Q8ND23 1372 aa22.34■■□□□ 1.17
CCDC7-203ENST00000362006 QSER1Q2KHR3 1735 aa22.33■■□□□ 1.17
CCDC7-203ENST00000362006 FAM177BA6PVY3 158 aa22.33■■□□□ 1.17
CCDC7-203ENST00000362006 DEFB132Q7Z7B7 95 aa22.33■■□□□ 1.17
CCDC7-203ENST00000362006 COL23A1Q86Y22 540 aaPredicted RBP22.33■■□□□ 1.17
CCDC7-203ENST00000362006 LRRCC1Q9C099 1032 aa22.33■■□□□ 1.17
CCDC7-203ENST00000362006 CHMP3Q9Y3E7 222 aa22.33■■□□□ 1.17
CCDC7-203ENST00000362006 LAMB2P55268 1798 aa22.33■■□□□ 1.17
CCDC7-203ENST00000362006 GTF2E1P29083 439 aaPredicted RBP22.33■■□□□ 1.16
CCDC7-203ENST00000362006 RFX5P48382 616 aaPredicted RBP22.33■■□□□ 1.16
CCDC7-203ENST00000362006 CTSWP56202 376 aa22.33■■□□□ 1.16
CCDC7-203ENST00000362006 NBPF5PQ86XG9 351 aaPredicted RBP22.33■■□□□ 1.16
CCDC7-203ENST00000362006 SYNE4Q8N205 404 aa22.33■■□□□ 1.16
CCDC7-203ENST00000362006 G3BP1Q13283 466 aaKnown RBP eCLIP22.32■■□□□ 1.16
CCDC7-203ENST00000362006 SLC10A5Q5PT55 438 aa22.32■■□□□ 1.16
CCDC7-203ENST00000362006 NLGN1Q8N2Q7 840 aa22.32■■□□□ 1.16
CCDC7-203ENST00000362006 NFIXQ14938 502 aa22.31■■□□□ 1.16
CCDC7-203ENST00000362006 CCDC57Q2TAC2 916 aa22.31■■□□□ 1.16
CCDC7-203ENST00000362006 TTLL11Q8NHH1 800 aa22.31■■□□□ 1.16
CCDC7-203ENST00000362006 KIF1BPQ96EK5 621 aa22.31■■□□□ 1.16
CCDC7-203ENST00000362006 LNPKQ9C0E8 428 aa22.31■■□□□ 1.16
CCDC7-203ENST00000362006 PNPLA7Q6ZV29 1317 aa22.31■■□□□ 1.16
CCDC7-203ENST00000362006 OS9Q13438 667 aaPredicted RBP22.31■■□□□ 1.16
CCDC7-203ENST00000362006 MSH5O43196 834 aa22.3■■□□□ 1.16
CCDC7-203ENST00000362006 TM4SF1P30408 202 aa22.3■■□□□ 1.16
CCDC7-203ENST00000362006 PTPN12Q05209 780 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms