RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 PNMA6EA0A0J9YXQ4 647 aa15.03■□□□□ -0
UBA3-202ENST00000361055 PRKCSHP14314 528 aaPredicted RBP15.03■□□□□ -0
UBA3-202ENST00000361055 GPT2Q8TD30 523 aa15.03■□□□□ -0
UBA3-202ENST00000361055 DBF4Q9UBU7 674 aaPredicted RBP15.03■□□□□ -0
UBA3-202ENST00000361055 USP16Q9Y5T5 823 aa15.03■□□□□ -0
UBA3-202ENST00000361055 TEX13AQ9BXU3 409 aaPredicted RBP15.02■□□□□ -0
UBA3-202ENST00000361055 PALLDQ8WX93 1383 aa15.02□□□□□ -0.01
UBA3-202ENST00000361055 BRD1O95696 1058 aa15.02□□□□□ -0.01
UBA3-202ENST00000361055 CHPF2Q9P2E5 772 aa15.02□□□□□ -0.01
UBA3-202ENST00000361055 ZNF831Q5JPB2 1677 aa15.02□□□□□ -0.01
UBA3-202ENST00000361055 RAB11FIP3O75154 756 aa15.01□□□□□ -0.01
UBA3-202ENST00000361055 MBD3O95983 291 aa15.01□□□□□ -0.01
UBA3-202ENST00000361055 BCL11BQ9C0K0 894 aaPredicted RBP15.01□□□□□ -0.01
UBA3-202ENST00000361055 USP44Q9H0E7 712 aa15.01□□□□□ -0.01
UBA3-202ENST00000361055 RBSNQ9H1K0 784 aa15.01□□□□□ -0.01
UBA3-202ENST00000361055 CICQ96RK0 1608 aaPredicted RBP15.01□□□□□ -0.01
UBA3-202ENST00000361055 SSH3Q8TE77 659 aa15.01□□□□□ -0.01
UBA3-202ENST00000361055 PDLIM2Q96JY6 352 aa15.01□□□□□ -0.01
UBA3-202ENST00000361055 TJP1Q07157 1748 aa15□□□□□ -0.01
UBA3-202ENST00000361055 TRIM6-TRIM34B2RNG4 842 aa15□□□□□ -0.01
UBA3-202ENST00000361055 LRSAM1Q6UWE0 723 aa15□□□□□ -0.01
UBA3-202ENST00000361055 PTF1AQ7RTS3 328 aa15□□□□□ -0.01
UBA3-202ENST00000361055 RILPL2Q969X0 211 aa15□□□□□ -0.01
UBA3-202ENST00000361055 DDX21Q9NR30 783 aaKnown RBP eCLIP15□□□□□ -0.01
UBA3-202ENST00000361055 EP400Q96L91 3159 aa15□□□□□ -0.01
UBA3-202ENST00000361055 UBE2Q2Q8WVN8 375 aa15□□□□□ -0.01
UBA3-202ENST00000361055 SLC4A9Q96Q91 983 aa15□□□□□ -0.01
UBA3-202ENST00000361055 LRRFIP2Q9Y608 721 aaKnown RBP15□□□□□ -0.01
UBA3-202ENST00000361055 LY75O60449 1722 aa14.99□□□□□ -0.01
UBA3-202ENST00000361055 LOC102724428A0A0B4J2F2 783 aa14.99□□□□□ -0.01
UBA3-202ENST00000361055 UBTFL1P0CB47 393 aaPredicted RBP14.99□□□□□ -0.01
UBA3-202ENST00000361055 SIK1P57059 783 aa14.99□□□□□ -0.01
UBA3-202ENST00000361055 TSHZ3Q63HK5 1081 aa14.99□□□□□ -0.01
UBA3-202ENST00000361055 ANO2Q9NQ90 1003 aa14.99□□□□□ -0.01
UBA3-202ENST00000361055 HYPKQ9NX55 129 aa14.99□□□□□ -0.01
UBA3-202ENST00000361055 PXDNLA1KZ92 1463 aa14.98□□□□□ -0.01
UBA3-202ENST00000361055 STARD3NLO95772 234 aa14.98□□□□□ -0.01
UBA3-202ENST00000361055 PDIA6Q15084 440 aa14.98□□□□□ -0.01
UBA3-202ENST00000361055 DNAJC10Q8IXB1 793 aa14.98□□□□□ -0.01
UBA3-202ENST00000361055 PALD1Q9ULE6 856 aa14.98□□□□□ -0.01
UBA3-202ENST00000361055 AK9Q5TCS8 1911 aa14.98□□□□□ -0.01
UBA3-202ENST00000361055 PHAXQ9H814 394 aaKnown RBP14.98□□□□□ -0.01
UBA3-202ENST00000361055 TMEM63CQ9P1W3 806 aa14.98□□□□□ -0.01
UBA3-202ENST00000361055 TPM2P07951 284 aa14.97□□□□□ -0.01
UBA3-202ENST00000361055 ATP6V1AP38606 617 aa14.97□□□□□ -0.01
UBA3-202ENST00000361055 POLA2Q14181 598 aa14.97□□□□□ -0.01
UBA3-202ENST00000361055 PROSER3Q2NL68 480 aa14.97□□□□□ -0.01
UBA3-202ENST00000361055 RBM27Q9P2N5 1060 aaKnown RBP14.97□□□□□ -0.01
UBA3-202ENST00000361055 OFD1O75665 1012 aa14.97□□□□□ -0.01
UBA3-202ENST00000361055 TRIM37O94972 964 aa14.97□□□□□ -0.01
UBA3-202ENST00000361055 ANXA1P04083 346 aa14.97□□□□□ -0.01
UBA3-202ENST00000361055 MSNP26038 577 aaKnown RBP14.97□□□□□ -0.01
UBA3-202ENST00000361055 HSPA4P34932 840 aa14.97□□□□□ -0.01
UBA3-202ENST00000361055 NOL7Q9UMY1 257 aaKnown RBP14.97□□□□□ -0.01
UBA3-202ENST00000361055 COL5A3P25940 1745 aaPredicted RBP14.97□□□□□ -0.01
UBA3-202ENST00000361055 MYL6BP14649 208 aa14.96□□□□□ -0.01
UBA3-202ENST00000361055 CYP19A1P11511 503 aaPredicted RBP14.95□□□□□ -0.02
UBA3-202ENST00000361055 TERF1P54274 439 aa14.95□□□□□ -0.02
UBA3-202ENST00000361055 RRP9O43818 475 aaKnown RBP14.95□□□□□ -0.02
UBA3-202ENST00000361055 A1BGP04217 495 aa14.95□□□□□ -0.02
UBA3-202ENST00000361055 LRP10Q7Z4F1 713 aa14.95□□□□□ -0.02
UBA3-202ENST00000361055 NBPF26B4DH59 902 aa14.94□□□□□ -0.02
UBA3-202ENST00000361055 MCM5P33992 734 aa14.94□□□□□ -0.02
UBA3-202ENST00000361055 NBPF14Q5TI25 921 aa14.94□□□□□ -0.02
UBA3-202ENST00000361055 NBPF10Q6P3W6 841 aaKnown RBP14.94□□□□□ -0.02
UBA3-202ENST00000361055 PPP1R42Q7Z4L9 355 aa14.94□□□□□ -0.02
UBA3-202ENST00000361055 NBPF15Q8N660 670 aa14.94□□□□□ -0.02
UBA3-202ENST00000361055 SYAP1Q96A49 352 aaPredicted RBP14.94□□□□□ -0.02
UBA3-202ENST00000361055 NSFL1CQ9UNZ2 370 aaKnown RBP14.94□□□□□ -0.02
UBA3-202ENST00000361055 TAF1LQ8IZX4 1826 aa14.94□□□□□ -0.02
UBA3-202ENST00000361055 ZNF500O60304 480 aaPredicted RBP14.94□□□□□ -0.02
UBA3-202ENST00000361055 SURF6O75683 361 aaKnown RBP14.94□□□□□ -0.02
UBA3-202ENST00000361055 RHPN1Q8TCX5 695 aa14.94□□□□□ -0.02
UBA3-202ENST00000361055 KIF1BPQ96EK5 621 aa14.94□□□□□ -0.02
UBA3-202ENST00000361055 TUBGCP6Q96RT7 1819 aa14.94□□□□□ -0.02
UBA3-202ENST00000361055 RREB1Q92766 1687 aa14.93□□□□□ -0.02
UBA3-202ENST00000361055 N4BP2Q86UW6 1770 aaPredicted RBP14.93□□□□□ -0.02
UBA3-202ENST00000361055 WDR33Q9C0J8 1336 aaKnown RBP14.93□□□□□ -0.02
UBA3-202ENST00000361055 SYCE3A1L190 88 aa14.93□□□□□ -0.02
UBA3-202ENST00000361055 PIP4K2AP48426 406 aaPredicted RBP14.93□□□□□ -0.02
UBA3-202ENST00000361055 ITPK1Q13572 414 aa14.93□□□□□ -0.02
UBA3-202ENST00000361055 HSP90AB4PQ58FF6 505 aa14.93□□□□□ -0.02
UBA3-202ENST00000361055 MYH14Q7Z406 1995 aaKnown RBP14.93□□□□□ -0.02
UBA3-202ENST00000361055 SGSM2O43147 1006 aa14.92□□□□□ -0.02
UBA3-202ENST00000361055 DDX58O95786 925 aaKnown RBP14.92□□□□□ -0.02
UBA3-202ENST00000361055 FOXD4L5Q5VV16 416 aaPredicted RBP14.92□□□□□ -0.02
UBA3-202ENST00000361055 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.92□□□□□ -0.02
UBA3-202ENST00000361055 PI4K2BQ8TCG2 481 aa14.92□□□□□ -0.02
UBA3-202ENST00000361055 FOXD4L4Q8WXT5 416 aaPredicted RBP14.92□□□□□ -0.02
UBA3-202ENST00000361055 CHAMP1Q96JM3 812 aa14.92□□□□□ -0.02
UBA3-202ENST00000361055 IL1RAPL2Q9NP60 686 aa14.92□□□□□ -0.02
UBA3-202ENST00000361055 AIMP1Q12904 312 aaKnown RBP14.92□□□□□ -0.02
UBA3-202ENST00000361055 COPS6Q7L5N1 327 aa14.92□□□□□ -0.02
UBA3-202ENST00000361055 NUTM1Q86Y26 1132 aa14.92□□□□□ -0.02
UBA3-202ENST00000361055 XAGE3Q8WTP9 111 aa14.92□□□□□ -0.02
UBA3-202ENST00000361055 CCNL1Q9UK58 526 aaPredicted RBP14.92□□□□□ -0.02
UBA3-202ENST00000361055 TNS1Q9HBL0 1735 aaKnown RBP14.92□□□□□ -0.02
UBA3-202ENST00000361055 HSP90AA2PQ14568 343 aaPredicted RBP14.91□□□□□ -0.02
UBA3-202ENST00000361055 UPF3BQ9BZI7 483 aaKnown RBP14.91□□□□□ -0.02
UBA3-202ENST00000361055 PI4KAP2A4QPH2 592 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms