RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 ZNF790Q6PG37 636 aa8.26□□□□□ -1.09
CDC42SE2-201ENST00000360515 SETDB2Q96T68 719 aa8.26□□□□□ -1.09
CDC42SE2-201ENST00000360515 POLR2AP24928 1970 aaKnown RBP8.25□□□□□ -1.09
CDC42SE2-201ENST00000360515 SUPT20HQ8NEM7 779 aa8.25□□□□□ -1.09
CDC42SE2-201ENST00000360515 SCN9AQ15858 1988 aa8.25□□□□□ -1.09
CDC42SE2-201ENST00000360515 CCDC85CA6NKD9 419 aa8.25□□□□□ -1.09
CDC42SE2-201ENST00000360515 RPS12P25398 132 aaKnown RBP8.25□□□□□ -1.09
CDC42SE2-201ENST00000360515 TM4SF4P48230 202 aa8.25□□□□□ -1.09
CDC42SE2-201ENST00000360515 ZNF652Q9Y2D9 606 aa8.25□□□□□ -1.09
CDC42SE2-201ENST00000360515 DGKZQ13574 1117 aa8.25□□□□□ -1.09
CDC42SE2-201ENST00000360515 NYXQ9GZU5 481 aa8.25□□□□□ -1.09
CDC42SE2-201ENST00000360515 HABP4Q5JVS0 413 aaKnown RBP8.24□□□□□ -1.09
CDC42SE2-201ENST00000360515 CYP4F22Q6NT55 531 aa8.24□□□□□ -1.09
CDC42SE2-201ENST00000360515 BEGAINQ9BUH8 593 aa8.24□□□□□ -1.09
CDC42SE2-201ENST00000360515 PRO3102Q9H379 93 aa8.24□□□□□ -1.09
CDC42SE2-201ENST00000360515 LGR6Q9HBX8 967 aa8.24□□□□□ -1.09
CDC42SE2-201ENST00000360515 OTOFQ9HC10 1997 aa8.24□□□□□ -1.09
CDC42SE2-201ENST00000360515 EIF6P56537 245 aaKnown RBP8.23□□□□□ -1.09
CDC42SE2-201ENST00000360515 MAP1SQ66K74 1059 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE2-201ENST00000360515 NBPF15Q8N660 670 aa8.23□□□□□ -1.09
CDC42SE2-201ENST00000360515 FMNL2Q96PY5 1086 aa8.23□□□□□ -1.09
CDC42SE2-201ENST00000360515 ABCC12Q96J65 1359 aa8.23□□□□□ -1.09
CDC42SE2-201ENST00000360515 PTCD1O75127 700 aaKnown RBP8.23□□□□□ -1.09
CDC42SE2-201ENST00000360515 AMER1Q5JTC6 1135 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE2-201ENST00000360515 INTS3Q68E01 1043 aaKnown RBP8.23□□□□□ -1.09
CDC42SE2-201ENST00000360515 CDC37L1Q7L3B6 337 aa8.23□□□□□ -1.09
CDC42SE2-201ENST00000360515 AEBP1Q8IUX7 1158 aa8.23□□□□□ -1.09
CDC42SE2-201ENST00000360515 RNF186Q9NXI6 227 aa8.23□□□□□ -1.09
CDC42SE2-201ENST00000360515 LMOD1P29536 600 aaPredicted RBP8.22□□□□□ -1.09
CDC42SE2-201ENST00000360515 TPTE2Q6XPS3 522 aa8.22□□□□□ -1.09
CDC42SE2-201ENST00000360515 ZNRF3Q9ULT6 936 aa8.22□□□□□ -1.09
CDC42SE2-201ENST00000360515 HPS5Q9UPZ3 1129 aa8.22□□□□□ -1.09
CDC42SE2-201ENST00000360515 ATP6V0A2Q9Y487 856 aa8.22□□□□□ -1.09
CDC42SE2-201ENST00000360515 AOC2O75106 756 aa8.22□□□□□ -1.09
CDC42SE2-201ENST00000360515 FXR1P51114 621 aaKnown RBP eCLIP8.22□□□□□ -1.09
CDC42SE2-201ENST00000360515 KIAA2012Q0VF49 1180 aa8.22□□□□□ -1.09
CDC42SE2-201ENST00000360515 RGMBQ6NW40 437 aa8.22□□□□□ -1.09
CDC42SE2-201ENST00000360515 ZNF34Q8IZ26 560 aa8.22□□□□□ -1.09
CDC42SE2-201ENST00000360515 COL2A1P02458 1487 aaPredicted RBP8.22□□□□□ -1.09
CDC42SE2-201ENST00000360515 ZNF280AP59817 542 aaPredicted RBP8.22□□□□□ -1.09
CDC42SE2-201ENST00000360515 MTHFSDQ2M296 383 aaKnown RBP8.22□□□□□ -1.09
CDC42SE2-201ENST00000360515 GPR153Q6NV75 609 aa8.22□□□□□ -1.09
CDC42SE2-201ENST00000360515 LRP10Q7Z4F1 713 aa8.22□□□□□ -1.09
CDC42SE2-201ENST00000360515 ZNF622Q969S3 477 aaKnown RBP eCLIP8.22□□□□□ -1.09
CDC42SE2-201ENST00000360515 A0A1W2PPC1 479 aa8.21□□□□□ -1.09
CDC42SE2-201ENST00000360515 FBXO46Q6PJ61 603 aaPredicted RBP8.21□□□□□ -1.09
CDC42SE2-201ENST00000360515 IL17REQ8NFR9 667 aa8.21□□□□□ -1.09
CDC42SE2-201ENST00000360515 ARMC5Q96C12 935 aa8.21□□□□□ -1.09
CDC42SE2-201ENST00000360515 ZNF277Q9NRM2 450 aaPredicted RBP8.21□□□□□ -1.09
CDC42SE2-201ENST00000360515 ABT1Q9ULW3 272 aaKnown RBP8.21□□□□□ -1.09
CDC42SE2-201ENST00000360515 HIRAP54198 1017 aaPredicted RBP8.21□□□□□ -1.1
CDC42SE2-201ENST00000360515 SP8Q8IXZ3 490 aa8.21□□□□□ -1.1
CDC42SE2-201ENST00000360515 GAS2L2Q8NHY3 880 aa8.21□□□□□ -1.1
CDC42SE2-201ENST00000360515 EPS15P42566 896 aa8.21□□□□□ -1.1
CDC42SE2-201ENST00000360515 MYH3P11055 1940 aa8.21□□□□□ -1.1
CDC42SE2-201ENST00000360515 SULT6B1Q6IMI4 303 aa8.2□□□□□ -1.1
CDC42SE2-201ENST00000360515 TNIP1Q15025 636 aa8.2□□□□□ -1.1
CDC42SE2-201ENST00000360515 DZIP3Q86Y13 1208 aaKnown RBP8.2□□□□□ -1.1
CDC42SE2-201ENST00000360515 NTSR2O95665 410 aa8.2□□□□□ -1.1
CDC42SE2-201ENST00000360515 RASAL3Q86YV0 1011 aa8.2□□□□□ -1.1
CDC42SE2-201ENST00000360515 JDP2Q8WYK2 163 aa8.2□□□□□ -1.1
CDC42SE2-201ENST00000360515 BABAM1Q9NWV8 329 aa8.2□□□□□ -1.1
CDC42SE2-201ENST00000360515 CIAPIN1Q6FI81 312 aa8.19□□□□□ -1.1
CDC42SE2-201ENST00000360515 GNAT3A8MTJ3 354 aa8.18□□□□□ -1.1
CDC42SE2-201ENST00000360515 NBPF26B4DH59 902 aa8.18□□□□□ -1.1
CDC42SE2-201ENST00000360515 BBOX1O75936 387 aa8.18□□□□□ -1.1
CDC42SE2-201ENST00000360515 MAP3K11Q16584 847 aa8.18□□□□□ -1.1
CDC42SE2-201ENST00000360515 NBPF10Q6P3W6 841 aaKnown RBP8.18□□□□□ -1.1
CDC42SE2-201ENST00000360515 RBM17Q96I25 401 aaKnown RBP8.18□□□□□ -1.1
CDC42SE2-201ENST00000360515 CSRNP1Q96S65 589 aa8.18□□□□□ -1.1
CDC42SE2-201ENST00000360515 MAP3K15Q6ZN16 1313 aa8.18□□□□□ -1.1
CDC42SE2-201ENST00000360515 TESPA1A2RU30 521 aaPredicted RBP8.18□□□□□ -1.1
CDC42SE2-201ENST00000360515 PER1O15534 1290 aaPredicted RBP8.18□□□□□ -1.1
CDC42SE2-201ENST00000360515 CELF2O95319 508 aaKnown RBP8.18□□□□□ -1.1
CDC42SE2-201ENST00000360515 SNRPA1P09661 255 aaKnown RBP8.18□□□□□ -1.1
CDC42SE2-201ENST00000360515 CXCL9Q07325 125 aa8.18□□□□□ -1.1
CDC42SE2-201ENST00000360515 PARP10Q53GL7 1025 aa8.18□□□□□ -1.1
CDC42SE2-201ENST00000360515 TRAF5O00463 557 aa8.17□□□□□ -1.1
CDC42SE2-201ENST00000360515 EAPPQ56P03 285 aaPredicted RBP8.17□□□□□ -1.1
CDC42SE2-201ENST00000360515 NBPF5PQ86XG9 351 aaPredicted RBP8.17□□□□□ -1.1
CDC42SE2-201ENST00000360515 OTUD5Q96G74 571 aa8.17□□□□□ -1.1
CDC42SE2-201ENST00000360515 PODXL2Q9NZ53 605 aa8.17□□□□□ -1.1
CDC42SE2-201ENST00000360515 NIM1KQ8IY84 436 aa8.17□□□□□ -1.1
CDC42SE2-201ENST00000360515 PPEF1O14829 653 aaPredicted RBP8.17□□□□□ -1.1
CDC42SE2-201ENST00000360515 MNX1P50219 401 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE2-201ENST00000360515 KIF23Q02241 960 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE2-201ENST00000360515 SLC39A6Q13433 755 aa8.16□□□□□ -1.1
CDC42SE2-201ENST00000360515 MGAMO43451 1857 aa8.16□□□□□ -1.1
CDC42SE2-201ENST00000360515 TTC5Q8N0Z6 440 aa8.16□□□□□ -1.1
CDC42SE2-201ENST00000360515 GMLQ99445 158 aa8.16□□□□□ -1.1
CDC42SE2-201ENST00000360515 GBA2Q9HCG7 927 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE2-201ENST00000360515 ALPK3Q96L96 1907 aa8.16□□□□□ -1.1
CDC42SE2-201ENST00000360515 UBN2Q6ZU65 1347 aa8.16□□□□□ -1.1
CDC42SE2-201ENST00000360515 VIL1P09327 827 aaKnown RBP8.16□□□□□ -1.1
CDC42SE2-201ENST00000360515 UBE2Q1Q7Z7E8 422 aa8.16□□□□□ -1.1
CDC42SE2-201ENST00000360515 GMPSP49915 693 aaPredicted RBP8.15□□□□□ -1.1
CDC42SE2-201ENST00000360515 CLEC11AQ9Y240 323 aa8.15□□□□□ -1.1
CDC42SE2-201ENST00000360515 CANXP27824 592 aaKnown RBP8.15□□□□□ -1.1
CDC42SE2-201ENST00000360515 ZBED3Q96IU2 234 aaPredicted RBP8.15□□□□□ -1.1
CDC42SE2-201ENST00000360515 YDJCA8MPS7 323 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms