RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 GPTP24298 496 aa31.06■■■□□ 2.56
SHARPIN-201ENST00000359551 SSFA2P28290 1259 aa31.06■■■□□ 2.56
SHARPIN-201ENST00000359551 TRAPPC3LQ5T215 181 aa31.06■■■□□ 2.56
SHARPIN-201ENST00000359551 UBN2Q6ZU65 1347 aa31.06■■■□□ 2.56
SHARPIN-201ENST00000359551 GCC1Q96CN9 775 aa31.06■■■□□ 2.56
SHARPIN-201ENST00000359551 PNMA6EA0A0J9YXQ4 647 aa31.05■■■□□ 2.56
SHARPIN-201ENST00000359551 PCCAP05165 728 aaPredicted RBP31.05■■■□□ 2.56
SHARPIN-201ENST00000359551 SSH3Q8TE77 659 aa31.05■■■□□ 2.56
SHARPIN-201ENST00000359551 CAMKK2Q96RR4 588 aa31.05■■■□□ 2.56
SHARPIN-201ENST00000359551 DCTPP1Q9H773 170 aa31.05■■■□□ 2.56
SHARPIN-201ENST00000359551 AKT1S1Q96B36 256 aa31.04■■■□□ 2.56
SHARPIN-201ENST00000359551 BCL2L12Q9HB09 334 aa31.04■■■□□ 2.56
SHARPIN-201ENST00000359551 USP42Q9H9J4 1324 aaKnown RBP31.03■■■□□ 2.56
SHARPIN-201ENST00000359551 COL24A1Q17RW2 1714 aa31.03■■■□□ 2.56
SHARPIN-201ENST00000359551 POLA2Q14181 598 aa31.03■■■□□ 2.56
SHARPIN-201ENST00000359551 ZBTB38Q8NAP3 1195 aaPredicted RBP31.03■■■□□ 2.56
SHARPIN-201ENST00000359551 PARP10Q53GL7 1025 aa31.03■■■□□ 2.56
SHARPIN-201ENST00000359551 PPP1R42Q7Z4L9 355 aa31.03■■■□□ 2.56
SHARPIN-201ENST00000359551 BICC1Q9H694 974 aaKnown RBP31.03■■■□□ 2.56
SHARPIN-201ENST00000359551 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.02■■■□□ 2.56
SHARPIN-201ENST00000359551 ZPR1O75312 459 aa31.02■■■□□ 2.56
SHARPIN-201ENST00000359551 USPL1Q5W0Q7 1092 aa31.02■■■□□ 2.56
SHARPIN-201ENST00000359551 JARID2Q92833 1246 aaPredicted RBP31.02■■■□□ 2.56
SHARPIN-201ENST00000359551 MYH3P11055 1940 aa31.02■■■□□ 2.56
SHARPIN-201ENST00000359551 CDHR2Q9BYE9 1310 aa31.01■■■□□ 2.56
SHARPIN-201ENST00000359551 RABL6Q3YEC7 729 aaPredicted RBP31.01■■■□□ 2.55
SHARPIN-201ENST00000359551 SRP68Q9UHB9 627 aaKnown RBP31.01■■■□□ 2.55
SHARPIN-201ENST00000359551 PHF14O94880 888 aa31■■■□□ 2.55
SHARPIN-201ENST00000359551 RFC4P35249 363 aa31■■■□□ 2.55
SHARPIN-201ENST00000359551 EPHA10Q5JZY3 1008 aa31■■■□□ 2.55
SHARPIN-201ENST00000359551 LAMB2P55268 1798 aa31■■■□□ 2.55
SHARPIN-201ENST00000359551 EN1Q05925 392 aaPredicted RBP31■■■□□ 2.55
SHARPIN-201ENST00000359551 ZNF827Q17R98 1081 aa31■■■□□ 2.55
SHARPIN-201ENST00000359551 NIP7Q9Y221 180 aaKnown RBP eCLIP31■■■□□ 2.55
SHARPIN-201ENST00000359551 SRGAP3O43295 1099 aa30.99■■■□□ 2.55
SHARPIN-201ENST00000359551 SF3B2Q13435 895 aaKnown RBP30.99■■■□□ 2.55
SHARPIN-201ENST00000359551 EZH2Q15910 746 aaKnown RBP30.99■■■□□ 2.55
SHARPIN-201ENST00000359551 QSER1Q2KHR3 1735 aa30.98■■■□□ 2.55
SHARPIN-201ENST00000359551 PLA2G12BQ9BX93 195 aa30.98■■■□□ 2.55
SHARPIN-201ENST00000359551 BAG6P46379 1132 aa30.97■■■□□ 2.55
SHARPIN-201ENST00000359551 FOXO4P98177 505 aa30.97■■■□□ 2.55
SHARPIN-201ENST00000359551 SUSD4Q5VX71 490 aa30.97■■■□□ 2.55
SHARPIN-201ENST00000359551 FAM89AQ96GI7 184 aa30.97■■■□□ 2.55
SHARPIN-201ENST00000359551 PDZRN3Q9UPQ7 1066 aa30.97■■■□□ 2.55
SHARPIN-201ENST00000359551 SOCS7O14512 581 aa30.96■■■□□ 2.55
SHARPIN-201ENST00000359551 RTL5Q5HYW3 569 aaPredicted RBP30.96■■■□□ 2.55
SHARPIN-201ENST00000359551 CCDC125Q86Z20 511 aa30.96■■■□□ 2.55
SHARPIN-201ENST00000359551 TRMT112Q9UI30 125 aaKnown RBP30.96■■■□□ 2.55
SHARPIN-201ENST00000359551 DDX60Q8IY21 1712 aaKnown RBP30.96■■■□□ 2.55
SHARPIN-201ENST00000359551 NUCB1Q02818 461 aa30.94■■■□□ 2.54
SHARPIN-201ENST00000359551 TBC1D9BQ66K14 1250 aa30.94■■■□□ 2.54
SHARPIN-201ENST00000359551 UTP14AQ9BVJ6 771 aaKnown RBP30.94■■■□□ 2.54
SHARPIN-201ENST00000359551 NTSR2O95665 410 aa30.93■■■□□ 2.54
SHARPIN-201ENST00000359551 TFCP2L1Q9NZI6 479 aa30.93■■■□□ 2.54
SHARPIN-201ENST00000359551 SH3TC1Q8TE82 1336 aa30.92■■■□□ 2.54
SHARPIN-201ENST00000359551 FLAD1Q8NFF5 587 aa30.91■■■□□ 2.54
SHARPIN-201ENST00000359551 LMBR1LQ6UX01 489 aa30.9■■■□□ 2.54
SHARPIN-201ENST00000359551 SYNE4Q8N205 404 aa30.9■■■□□ 2.54
SHARPIN-201ENST00000359551 NOP58Q9Y2X3 529 aaKnown RBP30.9■■■□□ 2.54
SHARPIN-201ENST00000359551 GYS1P13807 737 aa30.9■■■□□ 2.54
SHARPIN-201ENST00000359551 IRS4O14654 1257 aaPredicted RBP30.89■■■□□ 2.54
SHARPIN-201ENST00000359551 DEFB132Q7Z7B7 95 aa30.89■■■□□ 2.54
SHARPIN-201ENST00000359551 CHD1LQ86WJ1 897 aa30.89■■■□□ 2.54
SHARPIN-201ENST00000359551 SKAP1Q86WV1 359 aa30.89■■■□□ 2.54
SHARPIN-201ENST00000359551 SETDB2Q96T68 719 aa30.89■■■□□ 2.54
SHARPIN-201ENST00000359551 CASZ1Q86V15 1759 aa30.89■■■□□ 2.54
SHARPIN-201ENST00000359551 CSF1RP07333 972 aa30.88■■■□□ 2.53
SHARPIN-201ENST00000359551 ANKRD45Q5TZF3 282 aa30.88■■■□□ 2.53
SHARPIN-201ENST00000359551 EXOC6BQ9Y2D4 811 aa30.88■■■□□ 2.53
SHARPIN-201ENST00000359551 RFX5P48382 616 aaPredicted RBP30.87■■■□□ 2.53
SHARPIN-201ENST00000359551 PDE8AO60658 829 aa30.87■■■□□ 2.53
SHARPIN-201ENST00000359551 COL23A1Q86Y22 540 aaPredicted RBP30.87■■■□□ 2.53
SHARPIN-201ENST00000359551 ANO8Q9HCE9 1232 aaPredicted RBP30.87■■■□□ 2.53
SHARPIN-201ENST00000359551 PNPLA7Q6ZV29 1317 aa30.86■■■□□ 2.53
SHARPIN-201ENST00000359551 SURF6O75683 361 aaKnown RBP30.86■■■□□ 2.53
SHARPIN-201ENST00000359551 BICDL1Q6ZP65 573 aa30.86■■■□□ 2.53
SHARPIN-201ENST00000359551 RAB11FIP3O75154 756 aa30.85■■■□□ 2.53
SHARPIN-201ENST00000359551 NYXQ9GZU5 481 aa30.85■■■□□ 2.53
SHARPIN-201ENST00000359551 COPRSQ9NQ92 184 aa30.85■■■□□ 2.53
SHARPIN-201ENST00000359551 CARMIL3Q8ND23 1372 aa30.85■■■□□ 2.53
SHARPIN-201ENST00000359551 FAM177BA6PVY3 158 aa30.84■■■□□ 2.53
SHARPIN-201ENST00000359551 HSP90B1P14625 803 aaKnown RBP30.84■■■□□ 2.53
SHARPIN-201ENST00000359551 NFIXQ14938 502 aa30.84■■■□□ 2.53
SHARPIN-201ENST00000359551 SLC15A2Q16348 729 aa30.84■■■□□ 2.53
SHARPIN-201ENST00000359551 HSP90AB4PQ58FF6 505 aa30.84■■■□□ 2.53
SHARPIN-201ENST00000359551 PELP1Q8IZL8 1130 aaKnown RBP30.84■■■□□ 2.53
SHARPIN-201ENST00000359551 CTSWP56202 376 aa30.84■■■□□ 2.53
SHARPIN-201ENST00000359551 LNPKQ9C0E8 428 aa30.84■■■□□ 2.53
SHARPIN-201ENST00000359551 TTLL11Q8NHH1 800 aa30.83■■■□□ 2.53
SHARPIN-201ENST00000359551 STK32BQ9NY57 414 aa30.83■■■□□ 2.53
SHARPIN-201ENST00000359551 PDE4AP27815 886 aa30.82■■■□□ 2.52
SHARPIN-201ENST00000359551 PTPN12Q05209 780 aaKnown RBP30.82■■■□□ 2.52
SHARPIN-201ENST00000359551 PA2G4Q9UQ80 394 aaKnown RBP30.82■■■□□ 2.52
SHARPIN-201ENST00000359551 SLC10A5Q5PT55 438 aa30.81■■■□□ 2.52
SHARPIN-201ENST00000359551 NUTM1Q86Y26 1132 aa30.81■■■□□ 2.52
SHARPIN-201ENST00000359551 TM4SF1P30408 202 aa30.81■■■□□ 2.52
SHARPIN-201ENST00000359551 LRRCC1Q9C099 1032 aa30.81■■■□□ 2.52
SHARPIN-201ENST00000359551 NBPF5PQ86XG9 351 aaPredicted RBP30.8■■■□□ 2.52
SHARPIN-201ENST00000359551 CHMP3Q9Y3E7 222 aa30.8■■■□□ 2.52
SHARPIN-201ENST00000359551 HCLS1P14317 486 aaPredicted RBP30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms