RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 RTCBQ9Y3I0 505 aaKnown RBP16.69■□□□□ 0.26
CCDC197-201ENST00000359253 TCIRG1Q13488 830 aa16.68■□□□□ 0.26
CCDC197-201ENST00000359253 TTLL7Q6ZT98 887 aa16.68■□□□□ 0.26
CCDC197-201ENST00000359253 ISCA1Q9BUE6 129 aa16.68■□□□□ 0.26
CCDC197-201ENST00000359253 OSBPL3Q9H4L5 887 aa16.68■□□□□ 0.26
CCDC197-201ENST00000359253 MAP3K15Q6ZN16 1313 aa16.68■□□□□ 0.26
CCDC197-201ENST00000359253 H7C1W4 665 aa16.67■□□□□ 0.26
CCDC197-201ENST00000359253 RGL2O15211 777 aa16.67■□□□□ 0.26
CCDC197-201ENST00000359253 CRKLP46109 303 aaKnown RBP16.67■□□□□ 0.26
CCDC197-201ENST00000359253 PIP4K2AP48426 406 aaPredicted RBP16.67■□□□□ 0.26
CCDC197-201ENST00000359253 TRAPPC3LQ5T215 181 aa16.67■□□□□ 0.26
CCDC197-201ENST00000359253 INTS5Q6P9B9 1019 aaKnown RBP16.67■□□□□ 0.26
CCDC197-201ENST00000359253 GIGYF2Q6Y7W6 1299 aaKnown RBP16.67■□□□□ 0.26
CCDC197-201ENST00000359253 KIF1BPQ96EK5 621 aa16.67■□□□□ 0.26
CCDC197-201ENST00000359253 TJP1Q07157 1748 aa16.67■□□□□ 0.26
CCDC197-201ENST00000359253 A0A087WZG4 1122 aa16.66■□□□□ 0.26
CCDC197-201ENST00000359253 SURF6O75683 361 aaKnown RBP16.66■□□□□ 0.26
CCDC197-201ENST00000359253 RABL6Q3YEC7 729 aaPredicted RBP16.66■□□□□ 0.26
CCDC197-201ENST00000359253 PLEKHM2Q8IWE5 1019 aa16.66■□□□□ 0.26
CCDC197-201ENST00000359253 SUCLG2Q96I99 432 aa16.66■□□□□ 0.26
CCDC197-201ENST00000359253 CCDC87Q9NVE4 849 aa16.66■□□□□ 0.26
CCDC197-201ENST00000359253 PNPLA7Q6ZV29 1317 aa16.66■□□□□ 0.26
CCDC197-201ENST00000359253 GNPATO15228 680 aa16.65■□□□□ 0.26
CCDC197-201ENST00000359253 ANP32AP39687 249 aaKnown RBP16.65■□□□□ 0.26
CCDC197-201ENST00000359253 COL23A1Q86Y22 540 aaPredicted RBP16.65■□□□□ 0.26
CCDC197-201ENST00000359253 MTFR1LQ9H019 292 aa16.65■□□□□ 0.26
CCDC197-201ENST00000359253 EXOC6BQ9Y2D4 811 aa16.65■□□□□ 0.26
CCDC197-201ENST00000359253 TAF1LQ8IZX4 1826 aa16.65■□□□□ 0.26
CCDC197-201ENST00000359253 AOX1Q06278 1338 aa16.65■□□□□ 0.26
CCDC197-201ENST00000359253 AFDNP55196 1824 aaKnown RBP16.64■□□□□ 0.25
CCDC197-201ENST00000359253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.64■□□□□ 0.25
CCDC197-201ENST00000359253 EIF5P55010 431 aaKnown RBP16.64■□□□□ 0.25
CCDC197-201ENST00000359253 CASP7P55210 303 aa16.64■□□□□ 0.25
CCDC197-201ENST00000359253 KAZALD1Q96I82 304 aa16.64■□□□□ 0.25
CCDC197-201ENST00000359253 ZBTB3Q9H5J0 574 aa16.64■□□□□ 0.25
CCDC197-201ENST00000359253 BICC1Q9H694 974 aaKnown RBP16.64■□□□□ 0.25
CCDC197-201ENST00000359253 UPF2Q9HAU5 1272 aaKnown RBP16.64■□□□□ 0.25
CCDC197-201ENST00000359253 SPON1Q9HCB6 807 aa16.64■□□□□ 0.25
CCDC197-201ENST00000359253 ZBTB1Q9Y2K1 713 aa16.64■□□□□ 0.25
CCDC197-201ENST00000359253 C4BP0C0L5 1744 aa16.63■□□□□ 0.25
CCDC197-201ENST00000359253 ATP5J2-PTCD1G3V325 749 aa16.63■□□□□ 0.25
CCDC197-201ENST00000359253 RHPN1Q8TCX5 695 aa16.63■□□□□ 0.25
CCDC197-201ENST00000359253 PCCAP05165 728 aaPredicted RBP16.62■□□□□ 0.25
CCDC197-201ENST00000359253 ARHGEF1Q92888 912 aaKnown RBP16.62■□□□□ 0.25
CCDC197-201ENST00000359253 COPRSQ9NQ92 184 aa16.62■□□□□ 0.25
CCDC197-201ENST00000359253 STAP2Q9UGK3 403 aa16.62■□□□□ 0.25
CCDC197-201ENST00000359253 QSER1Q2KHR3 1735 aa16.62■□□□□ 0.25
CCDC197-201ENST00000359253 RFC4P35249 363 aa16.61■□□□□ 0.25
CCDC197-201ENST00000359253 G3BP1Q13283 466 aaKnown RBP eCLIP16.61■□□□□ 0.25
CCDC197-201ENST00000359253 TTC22Q5TAA0 569 aa16.61■□□□□ 0.25
CCDC197-201ENST00000359253 UBE3BQ7Z3V4 1068 aa16.61■□□□□ 0.25
CCDC197-201ENST00000359253 DZIP3Q86Y13 1208 aaKnown RBP16.61■□□□□ 0.25
CCDC197-201ENST00000359253 PLA2G12BQ9BX93 195 aa16.61■□□□□ 0.25
CCDC197-201ENST00000359253 MSH5O43196 834 aa16.6■□□□□ 0.25
CCDC197-201ENST00000359253 HSP90B1P14625 803 aaKnown RBP16.6■□□□□ 0.25
CCDC197-201ENST00000359253 PDE1AP54750 535 aa16.6■□□□□ 0.25
CCDC197-201ENST00000359253 OS9Q13438 667 aaPredicted RBP16.6■□□□□ 0.25
CCDC197-201ENST00000359253 CLASRPQ8N2M8 674 aaKnown RBP16.6■□□□□ 0.25
CCDC197-201ENST00000359253 NLGN1Q8N2Q7 840 aa16.6■□□□□ 0.25
CCDC197-201ENST00000359253 ZBTB38Q8NAP3 1195 aaPredicted RBP16.6■□□□□ 0.25
CCDC197-201ENST00000359253 PDGFDQ9GZP0 370 aaPredicted RBP16.6■□□□□ 0.25
CCDC197-201ENST00000359253 ZNF330Q9Y3S2 320 aaPredicted RBP16.6■□□□□ 0.25
CCDC197-201ENST00000359253 SALL3Q9BXA9 1300 aa16.6■□□□□ 0.25
CCDC197-201ENST00000359253 CDHR2Q9BYE9 1310 aa16.6■□□□□ 0.25
CCDC197-201ENST00000359253 SMARCA5O60264 1052 aaPredicted RBP16.59■□□□□ 0.25
CCDC197-201ENST00000359253 CLEC4GQ6UXB4 293 aa16.59■□□□□ 0.25
CCDC197-201ENST00000359253 FBXO3Q9UK99 471 aa16.59■□□□□ 0.25
CCDC197-201ENST00000359253 ZNF652Q9Y2D9 606 aa16.59■□□□□ 0.25
CCDC197-201ENST00000359253 COL5A3P25940 1745 aaPredicted RBP16.59■□□□□ 0.25
CCDC197-201ENST00000359253 APBB1O00213 710 aa16.58■□□□□ 0.24
CCDC197-201ENST00000359253 PHF14O94880 888 aa16.58■□□□□ 0.24
CCDC197-201ENST00000359253 MX1P20591 662 aa16.58■□□□□ 0.24
CCDC197-201ENST00000359253 FOXO4P98177 505 aa16.58■□□□□ 0.24
CCDC197-201ENST00000359253 PARP10Q53GL7 1025 aa16.58■□□□□ 0.24
CCDC197-201ENST00000359253 CASC1Q6TDU7 716 aa16.58■□□□□ 0.24
CCDC197-201ENST00000359253 AMIGO3Q86WK7 504 aa16.58■□□□□ 0.24
CCDC197-201ENST00000359253 C16orf71Q8IYS4 520 aaPredicted RBP16.58■□□□□ 0.24
CCDC197-201ENST00000359253 DDRGK1Q96HY6 314 aa16.58■□□□□ 0.24
CCDC197-201ENST00000359253 NARFQ9UHQ1 456 aa16.58■□□□□ 0.24
CCDC197-201ENST00000359253 TTC41PQ6P2S7 1318 aa16.57■□□□□ 0.24
CCDC197-201ENST00000359253 USP42Q9H9J4 1324 aaKnown RBP16.57■□□□□ 0.24
CCDC197-201ENST00000359253 ZPR1O75312 459 aa16.57■□□□□ 0.24
CCDC197-201ENST00000359253 CDC45O75419 566 aa16.57■□□□□ 0.24
CCDC197-201ENST00000359253 ZBTB7AO95365 584 aa16.57■□□□□ 0.24
CCDC197-201ENST00000359253 NLRP10Q86W26 655 aa16.57■□□□□ 0.24
CCDC197-201ENST00000359253 ZNF34Q8IZ26 560 aa16.57■□□□□ 0.24
CCDC197-201ENST00000359253 GPATCH3Q96I76 525 aa16.57■□□□□ 0.24
CCDC197-201ENST00000359253 ARXQ96QS3 562 aa16.57■□□□□ 0.24
CCDC197-201ENST00000359253 MYH14Q7Z406 1995 aaKnown RBP16.57■□□□□ 0.24
CCDC197-201ENST00000359253 ANKRD36CQ5JPF3 1778 aa16.56■□□□□ 0.24
CCDC197-201ENST00000359253 POLD1P28340 1107 aa16.56■□□□□ 0.24
CCDC197-201ENST00000359253 SGIP1Q9BQI5 828 aa16.56■□□□□ 0.24
CCDC197-201ENST00000359253 ATF5Q9Y2D1 282 aaPredicted RBP16.56■□□□□ 0.24
CCDC197-201ENST00000359253 UBR3Q6ZT12 1888 aa16.56■□□□□ 0.24
CCDC197-201ENST00000359253 ERC2O15083 957 aa16.55■□□□□ 0.24
CCDC197-201ENST00000359253 PTGER2P43116 358 aa16.55■□□□□ 0.24
CCDC197-201ENST00000359253 RFX5P48382 616 aaPredicted RBP16.55■□□□□ 0.24
CCDC197-201ENST00000359253 HLFQ16534 295 aa16.55■□□□□ 0.24
CCDC197-201ENST00000359253 EPHA10Q5JZY3 1008 aa16.55■□□□□ 0.24
CCDC197-201ENST00000359253 LMBR1LQ6UX01 489 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms