RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 CCDC8Q9H0W5 538 aaPredicted RBP15.48■□□□□ 0.07
GGPS1-202ENST00000358966 IL25Q9H293 177 aa15.48■□□□□ 0.07
GGPS1-202ENST00000358966 TBC1D2BQ9UPU7 963 aa15.48■□□□□ 0.07
GGPS1-202ENST00000358966 NUP188Q5SRE5 1749 aa15.48■□□□□ 0.07
GGPS1-202ENST00000358966 CYP19A1P11511 503 aaPredicted RBP15.48■□□□□ 0.07
GGPS1-202ENST00000358966 HSPA1LP34931 641 aa15.48■□□□□ 0.07
GGPS1-202ENST00000358966 CASP7P55210 303 aa15.48■□□□□ 0.07
GGPS1-202ENST00000358966 OSBPL3Q9H4L5 887 aa15.48■□□□□ 0.07
GGPS1-202ENST00000358966 LMBR1LQ6UX01 489 aa15.47■□□□□ 0.07
GGPS1-202ENST00000358966 JCADQ9P266 1359 aa15.47■□□□□ 0.07
GGPS1-202ENST00000358966 STARD3NLO95772 234 aa15.47■□□□□ 0.07
GGPS1-202ENST00000358966 PI4K2BQ8TCG2 481 aa15.47■□□□□ 0.07
GGPS1-202ENST00000358966 KIF2CQ99661 725 aa15.47■□□□□ 0.07
GGPS1-202ENST00000358966 ERBB4Q15303 1308 aa15.47■□□□□ 0.07
GGPS1-202ENST00000358966 RAB11FIP3O75154 756 aa15.46■□□□□ 0.07
GGPS1-202ENST00000358966 CD2BP2O95400 341 aaKnown RBP15.46■□□□□ 0.07
GGPS1-202ENST00000358966 AACSQ86V21 672 aa15.46■□□□□ 0.07
GGPS1-202ENST00000358966 FAM89AQ96GI7 184 aa15.46■□□□□ 0.07
GGPS1-202ENST00000358966 CWC25Q9NXE8 425 aaPredicted RBP15.46■□□□□ 0.07
GGPS1-202ENST00000358966 EAF2Q96CJ1 260 aaPredicted RBP15.46■□□□□ 0.07
GGPS1-202ENST00000358966 THRAP3Q9Y2W1 955 aaKnown RBP15.46■□□□□ 0.07
GGPS1-202ENST00000358966 TUBGCP6Q96RT7 1819 aa15.46■□□□□ 0.06
GGPS1-202ENST00000358966 CERKQ8TCT0 537 aa15.45■□□□□ 0.06
GGPS1-202ENST00000358966 ZNF594Q96JF6 807 aaPredicted RBP15.45■□□□□ 0.06
GGPS1-202ENST00000358966 USP21Q9UK80 565 aa15.45■□□□□ 0.06
GGPS1-202ENST00000358966 ATP6V1AP38606 617 aa15.45■□□□□ 0.06
GGPS1-202ENST00000358966 TJP1Q07157 1748 aa15.45■□□□□ 0.06
GGPS1-202ENST00000358966 PTPN12Q05209 780 aaKnown RBP15.45■□□□□ 0.06
GGPS1-202ENST00000358966 G3BP1Q13283 466 aaKnown RBP eCLIP15.45■□□□□ 0.06
GGPS1-202ENST00000358966 ITPK1Q13572 414 aa15.45■□□□□ 0.06
GGPS1-202ENST00000358966 BBXQ8WY36 941 aaPredicted RBP15.45■□□□□ 0.06
GGPS1-202ENST00000358966 STAP2Q9UGK3 403 aa15.45■□□□□ 0.06
GGPS1-202ENST00000358966 NDUFB9Q9Y6M9 179 aa15.45■□□□□ 0.06
GGPS1-202ENST00000358966 NWD2Q9ULI1 1742 aa15.44■□□□□ 0.06
GGPS1-202ENST00000358966 FAM177BA6PVY3 158 aa15.44■□□□□ 0.06
GGPS1-202ENST00000358966 RFX5P48382 616 aaPredicted RBP15.44■□□□□ 0.06
GGPS1-202ENST00000358966 RBM25P49756 843 aaKnown RBP15.44■□□□□ 0.06
GGPS1-202ENST00000358966 FOXO4P98177 505 aa15.44■□□□□ 0.06
GGPS1-202ENST00000358966 CLASRPQ8N2M8 674 aaKnown RBP15.44■□□□□ 0.06
GGPS1-202ENST00000358966 NAP1L2Q9ULW6 460 aaPredicted RBP15.44■□□□□ 0.06
GGPS1-202ENST00000358966 H7C1W4 665 aa15.43■□□□□ 0.06
GGPS1-202ENST00000358966 KIF6Q6ZMV9 814 aa15.43■□□□□ 0.06
GGPS1-202ENST00000358966 BARGINQ6ZT62 677 aa15.43■□□□□ 0.06
GGPS1-202ENST00000358966 CDCA7Q9BWT1 371 aaPredicted RBP15.43■□□□□ 0.06
GGPS1-202ENST00000358966 LOC102724428A0A0B4J2F2 783 aa15.43■□□□□ 0.06
GGPS1-202ENST00000358966 SIK1P57059 783 aa15.43■□□□□ 0.06
GGPS1-202ENST00000358966 IFIT2P09913 472 aaKnown RBP15.42■□□□□ 0.06
GGPS1-202ENST00000358966 TFCP2Q12800 502 aa15.42■□□□□ 0.06
GGPS1-202ENST00000358966 TCIRG1Q13488 830 aa15.42■□□□□ 0.06
GGPS1-202ENST00000358966 MEX3CQ5U5Q3 659 aaKnown RBP15.42■□□□□ 0.06
GGPS1-202ENST00000358966 RABL6Q3YEC7 729 aaPredicted RBP15.42■□□□□ 0.06
GGPS1-202ENST00000358966 HSP90AB4PQ58FF6 505 aa15.42■□□□□ 0.06
GGPS1-202ENST00000358966 EDC3Q96F86 508 aaKnown RBP15.42■□□□□ 0.06
GGPS1-202ENST00000358966 USP26Q9BXU7 913 aa15.42■□□□□ 0.06
GGPS1-202ENST00000358966 MYH14Q7Z406 1995 aaKnown RBP15.42■□□□□ 0.06
GGPS1-202ENST00000358966 CHMLP26374 656 aa15.41■□□□□ 0.06
GGPS1-202ENST00000358966 CRKLP46109 303 aaKnown RBP15.41■□□□□ 0.06
GGPS1-202ENST00000358966 VPS72Q15906 364 aa15.41■□□□□ 0.06
GGPS1-202ENST00000358966 MAP3K15Q6ZN16 1313 aa15.41■□□□□ 0.06
GGPS1-202ENST00000358966 PALLDQ8WX93 1383 aa15.41■□□□□ 0.06
GGPS1-202ENST00000358966 CCDC191Q8NCU4 936 aa15.41■□□□□ 0.06
GGPS1-202ENST00000358966 ISCA1Q9BUE6 129 aa15.41■□□□□ 0.06
GGPS1-202ENST00000358966 TEX13AQ9BXU3 409 aaPredicted RBP15.41■□□□□ 0.06
GGPS1-202ENST00000358966 FOXD4L1Q9NU39 408 aa15.41■□□□□ 0.06
GGPS1-202ENST00000358966 LRRC24Q50LG9 513 aa15.4■□□□□ 0.06
GGPS1-202ENST00000358966 DZIP3Q86Y13 1208 aaKnown RBP15.4■□□□□ 0.06
GGPS1-202ENST00000358966 FNBP4Q8N3X1 1017 aaPredicted RBP15.4■□□□□ 0.06
GGPS1-202ENST00000358966 PUS3Q9BZE2 481 aaKnown RBP15.4■□□□□ 0.06
GGPS1-202ENST00000358966 AK9Q5TCS8 1911 aa15.4■□□□□ 0.06
GGPS1-202ENST00000358966 BECN1Q14457 450 aa15.4■□□□□ 0.06
GGPS1-202ENST00000358966 INTS5Q6P9B9 1019 aaKnown RBP15.4■□□□□ 0.06
GGPS1-202ENST00000358966 CASC1Q6TDU7 716 aa15.4■□□□□ 0.06
GGPS1-202ENST00000358966 PAXIP1Q6ZW49 1069 aaPredicted RBP15.4■□□□□ 0.06
GGPS1-202ENST00000358966 BOLA2Q9H3K6 86 aa15.4■□□□□ 0.06
GGPS1-202ENST00000358966 HDAC5Q9UQL6 1122 aa15.4■□□□□ 0.06
GGPS1-202ENST00000358966 CHGBP05060 677 aa15.39■□□□□ 0.05
GGPS1-202ENST00000358966 ESYT1Q9BSJ8 1104 aa15.39■□□□□ 0.05
GGPS1-202ENST00000358966 ANO2Q9NQ90 1003 aa15.39■□□□□ 0.05
GGPS1-202ENST00000358966 ERC2O15083 957 aa15.39■□□□□ 0.05
GGPS1-202ENST00000358966 GIGYF2Q6Y7W6 1299 aaKnown RBP15.39■□□□□ 0.05
GGPS1-202ENST00000358966 PDCL3Q9H2J4 239 aa15.39■□□□□ 0.05
GGPS1-202ENST00000358966 UBN2Q6ZU65 1347 aa15.38■□□□□ 0.05
GGPS1-202ENST00000358966 CWC27Q6UX04 472 aaKnown RBP15.38■□□□□ 0.05
GGPS1-202ENST00000358966 COPRSQ9NQ92 184 aa15.38■□□□□ 0.05
GGPS1-202ENST00000358966 ECHDC1Q9NTX5 307 aa15.38■□□□□ 0.05
GGPS1-202ENST00000358966 DBNLQ9UJU6 430 aaKnown RBP15.38■□□□□ 0.05
GGPS1-202ENST00000358966 FRAT2O75474 233 aaPredicted RBP15.38■□□□□ 0.05
GGPS1-202ENST00000358966 ERC1Q8IUD2 1116 aa15.38■□□□□ 0.05
GGPS1-202ENST00000358966 AFF2P51816 1311 aa15.38■□□□□ 0.05
GGPS1-202ENST00000358966 CLCN1P35523 988 aa15.37■□□□□ 0.05
GGPS1-202ENST00000358966 NLRP10Q86W26 655 aa15.37■□□□□ 0.05
GGPS1-202ENST00000358966 PALD1Q9ULE6 856 aa15.37■□□□□ 0.05
GGPS1-202ENST00000358966 GTF2E1P29083 439 aaPredicted RBP15.37■□□□□ 0.05
GGPS1-202ENST00000358966 DBNDD2Q9BQY9 259 aa15.37■□□□□ 0.05
GGPS1-202ENST00000358966 CCDC87Q9NVE4 849 aa15.37■□□□□ 0.05
GGPS1-202ENST00000358966 TIMM10P62072 90 aa15.36■□□□□ 0.05
GGPS1-202ENST00000358966 ATG9AQ7Z3C6 839 aa15.36■□□□□ 0.05
GGPS1-202ENST00000358966 NUP98P52948 1817 aa15.36■□□□□ 0.05
GGPS1-202ENST00000358966 GLRX3O76003 335 aaKnown RBP15.36■□□□□ 0.05
GGPS1-202ENST00000358966 TNNI3KQ59H18 835 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms